RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 AGBL3Q8NEM8 1001 aa19.25■□□□□ 0.67
USB1-202ENST00000423271 GMLQ99445 158 aa19.25■□□□□ 0.67
USB1-202ENST00000423271 SRCIN1Q9C0H9 1055 aa19.25■□□□□ 0.67
USB1-202ENST00000423271 ANKRD2Q9GZV1 360 aa19.25■□□□□ 0.67
USB1-202ENST00000423271 LEMD3Q9Y2U8 911 aa19.25■□□□□ 0.67
USB1-202ENST00000423271 THSD7BQ9C0I4 1608 aa19.25■□□□□ 0.67
USB1-202ENST00000423271 ZNF804BA4D1E1 1349 aa19.25■□□□□ 0.67
USB1-202ENST00000423271 ASTN2O75129 1339 aaPredicted RBP19.25■□□□□ 0.67
USB1-202ENST00000423271 ADM5C9JUS6 153 aa19.24■□□□□ 0.67
USB1-202ENST00000423271 SNAP23O00161 211 aa19.24■□□□□ 0.67
USB1-202ENST00000423271 FOXN1O15353 648 aa19.24■□□□□ 0.67
USB1-202ENST00000423271 ZNF280AP59817 542 aaPredicted RBP19.24■□□□□ 0.67
USB1-202ENST00000423271 CYP4F22Q6NT55 531 aa19.24■□□□□ 0.67
USB1-202ENST00000423271 SSH1Q8WYL5 1049 aa19.24■□□□□ 0.67
USB1-202ENST00000423271 MXD3Q9BW11 206 aa19.24■□□□□ 0.67
USB1-202ENST00000423271 C9orf78Q9NZ63 289 aaPredicted RBP19.24■□□□□ 0.67
USB1-202ENST00000423271 GRM1Q13255 1194 aa19.23■□□□□ 0.67
USB1-202ENST00000423271 KRT26Q7Z3Y9 468 aa19.23■□□□□ 0.67
USB1-202ENST00000423271 HELBQ8NG08 1087 aaPredicted RBP19.23■□□□□ 0.67
USB1-202ENST00000423271 ZNF594Q96JF6 807 aaPredicted RBP19.23■□□□□ 0.67
USB1-202ENST00000423271 CAPNS2Q96L46 248 aa19.23■□□□□ 0.67
USB1-202ENST00000423271 COA1Q9GZY4 146 aa19.23■□□□□ 0.67
USB1-202ENST00000423271 GGA3Q9NZ52 723 aa19.23■□□□□ 0.67
USB1-202ENST00000423271 TAF5LO75529 589 aa19.22■□□□□ 0.67
USB1-202ENST00000423271 DACT2Q5SW24 774 aa19.22■□□□□ 0.67
USB1-202ENST00000423271 SAPCD2Q86UD0 394 aa19.22■□□□□ 0.67
USB1-202ENST00000423271 FBXW7Q969H0 707 aa19.22■□□□□ 0.67
USB1-202ENST00000423271 SUCLG2Q96I99 432 aa19.22■□□□□ 0.67
USB1-202ENST00000423271 IRS2Q9Y4H2 1338 aa19.22■□□□□ 0.67
USB1-202ENST00000423271 NBPF7P0C2Y1 421 aaPredicted RBP19.21■□□□□ 0.67
USB1-202ENST00000423271 USP17L8P0C7I0 530 aa19.21■□□□□ 0.67
USB1-202ENST00000423271 KCNJ4P48050 445 aa19.21■□□□□ 0.67
USB1-202ENST00000423271 DCPSQ96C86 337 aaKnown RBP19.21■□□□□ 0.67
USB1-202ENST00000423271 KAZALD1Q96I82 304 aa19.21■□□□□ 0.67
USB1-202ENST00000423271 WBP1LQ9NX94 342 aa19.21■□□□□ 0.67
USB1-202ENST00000423271 CCDC57Q2TAC2 916 aa19.2■□□□□ 0.66
USB1-202ENST00000423271 MYOZ2Q9NPC6 264 aa19.2■□□□□ 0.66
USB1-202ENST00000423271 PTPRCP08575 1304 aa19.2■□□□□ 0.66
USB1-202ENST00000423271 ECE1P42892 770 aa19.19■□□□□ 0.66
USB1-202ENST00000423271 SCARF1Q14162 830 aa19.19■□□□□ 0.66
USB1-202ENST00000423271 TAF7LQ5H9L4 462 aa19.19■□□□□ 0.66
USB1-202ENST00000423271 STRIP1Q5VSL9 837 aa19.19■□□□□ 0.66
USB1-202ENST00000423271 TRMT2AQ8IZ69 625 aaKnown RBP19.19■□□□□ 0.66
USB1-202ENST00000423271 AIDAQ96BJ3 306 aa19.19■□□□□ 0.66
USB1-202ENST00000423271 UTYO14607 1347 aa19.19■□□□□ 0.66
USB1-202ENST00000423271 AOC2O75106 756 aa19.18■□□□□ 0.66
USB1-202ENST00000423271 ANGEL2Q5VTE6 544 aaKnown RBP19.18■□□□□ 0.66
USB1-202ENST00000423271 LDHAL6AQ6ZMR3 332 aa19.17■□□□□ 0.66
USB1-202ENST00000423271 SULF1Q8IWU6 871 aa19.17■□□□□ 0.66
USB1-202ENST00000423271 TNS4Q8IZW8 715 aa19.17■□□□□ 0.66
USB1-202ENST00000423271 BICC1Q9H694 974 aaKnown RBP19.17■□□□□ 0.66
USB1-202ENST00000423271 CD209Q9NNX6 404 aa19.17■□□□□ 0.66
USB1-202ENST00000423271 CNNM1Q9NRU3 951 aa19.17■□□□□ 0.66
USB1-202ENST00000423271 PLIN1O60240 522 aa19.16■□□□□ 0.66
USB1-202ENST00000423271 CTCFP49711 727 aaPredicted RBP19.16■□□□□ 0.66
USB1-202ENST00000423271 GTF2IP78347 998 aa19.16■□□□□ 0.66
USB1-202ENST00000423271 MAP2K1Q02750 393 aaPredicted RBP19.16■□□□□ 0.66
USB1-202ENST00000423271 ALDH1L2Q3SY69 923 aa19.16■□□□□ 0.66
USB1-202ENST00000423271 TTLL5Q6EMB2 1281 aa19.16■□□□□ 0.66
USB1-202ENST00000423271 C15orf52Q6ZUT6 534 aaKnown RBP19.16■□□□□ 0.66
USB1-202ENST00000423271 HHIPL1Q96JK4 782 aa19.16■□□□□ 0.66
USB1-202ENST00000423271 PUS3Q9BZE2 481 aaKnown RBP19.16■□□□□ 0.66
USB1-202ENST00000423271 SMC4Q9NTJ3 1288 aa19.16■□□□□ 0.66
USB1-202ENST00000423271 SCAF8Q9UPN6 1271 aaKnown RBP19.16■□□□□ 0.66
USB1-202ENST00000423271 MYO3BQ8WXR4 1341 aa19.16■□□□□ 0.66
USB1-202ENST00000423271 HUNKP57058 714 aa19.15■□□□□ 0.66
USB1-202ENST00000423271 NBPF9Q3BBW0 867 aa19.15■□□□□ 0.66
USB1-202ENST00000423271 RABL6Q3YEC7 729 aaPredicted RBP19.15■□□□□ 0.66
USB1-202ENST00000423271 ANKRD44Q8N8A2 993 aa19.15■□□□□ 0.66
USB1-202ENST00000423271 CDCA5Q96FF9 252 aa19.15■□□□□ 0.66
USB1-202ENST00000423271 GBA2Q9HCG7 927 aaPredicted RBP19.15■□□□□ 0.66
USB1-202ENST00000423271 HSPA8P11142 646 aaKnown RBP19.14■□□□□ 0.65
USB1-202ENST00000423271 KIAA0825Q8IV33 1275 aa19.14■□□□□ 0.65
USB1-202ENST00000423271 SASH1O94885 1247 aa19.13■□□□□ 0.65
USB1-202ENST00000423271 LBX1P52954 281 aa19.13■□□□□ 0.65
USB1-202ENST00000423271 OGFOD1Q8N543 542 aa19.13■□□□□ 0.65
USB1-202ENST00000423271 CERS5Q8N5B7 392 aa19.13■□□□□ 0.65
USB1-202ENST00000423271 USP44Q9H0E7 712 aa19.13■□□□□ 0.65
USB1-202ENST00000423271 PITPNM2Q9BZ72 1349 aa19.13■□□□□ 0.65
USB1-202ENST00000423271 WNT10BO00744 389 aa19.12■□□□□ 0.65
USB1-202ENST00000423271 MAP2K2P36507 400 aa19.12■□□□□ 0.65
USB1-202ENST00000423271 ZNF804AQ7Z570 1209 aa19.12■□□□□ 0.65
USB1-202ENST00000423271 C2orf69Q8N8R5 385 aa19.12■□□□□ 0.65
USB1-202ENST00000423271 PRDM10Q9NQV6 1147 aa19.12■□□□□ 0.65
USB1-202ENST00000423271 JAG2Q9Y219 1238 aa19.12■□□□□ 0.65
USB1-202ENST00000423271 IL1R1P14778 569 aa19.11■□□□□ 0.65
USB1-202ENST00000423271 ZIC5Q96T25 663 aa19.11■□□□□ 0.65
USB1-202ENST00000423271 CT47B1P0C2W7 299 aaPredicted RBP19.1■□□□□ 0.65
USB1-202ENST00000423271 LRRC24Q50LG9 513 aa19.1■□□□□ 0.65
USB1-202ENST00000423271 KLHDC4Q8TBB5 520 aa19.1■□□□□ 0.65
USB1-202ENST00000423271 RIPOR2Q9Y4F9 1068 aa19.1■□□□□ 0.65
USB1-202ENST00000423271 FAM155AB1AL88 458 aaPredicted RBP19.09■□□□□ 0.65
USB1-202ENST00000423271 HNRNPUQ00839 825 aaKnown RBP eCLIP19.09■□□□□ 0.65
USB1-202ENST00000423271 PRAMEF18Q5VWM3 479 aa19.09■□□□□ 0.65
USB1-202ENST00000423271 RGMBQ6NW40 437 aa19.09■□□□□ 0.65
USB1-202ENST00000423271 ZBED3Q96IU2 234 aaPredicted RBP19.09■□□□□ 0.65
USB1-202ENST00000423271 TSKSQ9UJT2 592 aa19.09■□□□□ 0.65
USB1-202ENST00000423271 HDAC9Q9UKV0 1011 aa19.09■□□□□ 0.65
USB1-202ENST00000423271 NOB1Q9ULX3 412 aaKnown RBP19.09■□□□□ 0.65
USB1-202ENST00000423271 PAPPA2Q9BXP8 1791 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms