RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 MROH5Q6ZUA9 1318 aa12.06□□□□□ -0.48
HERC3-204ENST00000422770 GNAI2P04899 355 aa12.05□□□□□ -0.48
HERC3-204ENST00000422770 MS4A1P11836 297 aa12.05□□□□□ -0.48
HERC3-204ENST00000422770 SCNN1DP51172 638 aa12.05□□□□□ -0.48
HERC3-204ENST00000422770 IRX6P78412 446 aaPredicted RBP12.05□□□□□ -0.48
HERC3-204ENST00000422770 ZNF804AQ7Z570 1209 aa12.05□□□□□ -0.48
HERC3-204ENST00000422770 PNMA8AQ86V59 439 aaPredicted RBP12.05□□□□□ -0.48
HERC3-204ENST00000422770 TXNRD3Q86VQ6 643 aa12.05□□□□□ -0.48
HERC3-204ENST00000422770 GPRC5DQ9NZD1 345 aa12.05□□□□□ -0.48
HERC3-204ENST00000422770 ZNF646O15015 1829 aaPredicted RBP12.04□□□□□ -0.48
HERC3-204ENST00000422770 USP17L3A6NCW0 530 aa12.04□□□□□ -0.48
HERC3-204ENST00000422770 USP17L4A6NCW7 530 aa12.04□□□□□ -0.48
HERC3-204ENST00000422770 H7C1D1 291 aa12.04□□□□□ -0.48
HERC3-204ENST00000422770 SRGAP3O43295 1099 aa12.04□□□□□ -0.48
HERC3-204ENST00000422770 RLBP1P12271 317 aa12.04□□□□□ -0.48
HERC3-204ENST00000422770 FSTL1Q12841 308 aa12.04□□□□□ -0.48
HERC3-204ENST00000422770 RBM26Q5T8P6 1007 aaKnown RBP12.04□□□□□ -0.48
HERC3-204ENST00000422770 CHADLQ6NUI6 762 aa12.04□□□□□ -0.48
HERC3-204ENST00000422770 USP17L1Q7RTZ2 530 aa12.04□□□□□ -0.48
HERC3-204ENST00000422770 LDHDQ86WU2 507 aa12.04□□□□□ -0.48
HERC3-204ENST00000422770 VPS37DQ86XT2 251 aa12.04□□□□□ -0.48
HERC3-204ENST00000422770 MICALL2Q8IY33 904 aa12.04□□□□□ -0.48
HERC3-204ENST00000422770 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.04□□□□□ -0.48
HERC3-204ENST00000422770 COA1Q9GZY4 146 aa12.04□□□□□ -0.48
HERC3-204ENST00000422770 C1orf115Q9H7X2 142 aa12.04□□□□□ -0.48
HERC3-204ENST00000422770 PA2G4Q9UQ80 394 aaKnown RBP12.04□□□□□ -0.48
HERC3-204ENST00000422770 SHTN1A0MZ66 631 aa12.03□□□□□ -0.48
HERC3-204ENST00000422770 EYA2O00167 538 aa12.03□□□□□ -0.48
HERC3-204ENST00000422770 PODNQ7Z5L7 613 aa12.03□□□□□ -0.48
HERC3-204ENST00000422770 CNOT7Q9UIV1 285 aaKnown RBP12.03□□□□□ -0.48
HERC3-204ENST00000422770 RIPOR2Q9Y4F9 1068 aa12.03□□□□□ -0.48
HERC3-204ENST00000422770 ADAMTSL1Q8N6G6 1762 aa12.02□□□□□ -0.48
HERC3-204ENST00000422770 FRAT2O75474 233 aaPredicted RBP12.02□□□□□ -0.49
HERC3-204ENST00000422770 GYG1P46976 350 aa12.02□□□□□ -0.49
HERC3-204ENST00000422770 RFX5P48382 616 aaPredicted RBP12.02□□□□□ -0.49
HERC3-204ENST00000422770 GTF2IP78347 998 aa12.02□□□□□ -0.49
HERC3-204ENST00000422770 PTPN12Q05209 780 aaKnown RBP12.02□□□□□ -0.49
HERC3-204ENST00000422770 UBE4AQ14139 1066 aa12.02□□□□□ -0.49
HERC3-204ENST00000422770 MAP1SQ66K74 1059 aaPredicted RBP12.02□□□□□ -0.49
HERC3-204ENST00000422770 ADARB2Q9NS39 739 aaKnown RBP12.02□□□□□ -0.49
HERC3-204ENST00000422770 JAG2Q9Y219 1238 aa12.02□□□□□ -0.49
HERC3-204ENST00000422770 ARAP2Q8WZ64 1704 aa12.02□□□□□ -0.49
HERC3-204ENST00000422770 POLR2AP24928 1970 aaKnown RBP12.01□□□□□ -0.49
HERC3-204ENST00000422770 SLC5A1P13866 664 aa12.01□□□□□ -0.49
HERC3-204ENST00000422770 RPS12P25398 132 aaKnown RBP12.01□□□□□ -0.49
HERC3-204ENST00000422770 OS9Q13438 667 aaPredicted RBP12.01□□□□□ -0.49
HERC3-204ENST00000422770 TBC1D10BQ4KMP7 808 aaPredicted RBP12.01□□□□□ -0.49
HERC3-204ENST00000422770 TTLL5Q6EMB2 1281 aa12.01□□□□□ -0.49
HERC3-204ENST00000422770 RSBN1LQ6PCB5 846 aaPredicted RBP12.01□□□□□ -0.49
HERC3-204ENST00000422770 USP50Q70EL3 339 aaPredicted RBP12.01□□□□□ -0.49
HERC3-204ENST00000422770 SAMD7Q7Z3H4 446 aa12.01□□□□□ -0.49
HERC3-204ENST00000422770 TRPM4Q8TD43 1214 aa12.01□□□□□ -0.49
HERC3-204ENST00000422770 MXD3Q9BW11 206 aa12.01□□□□□ -0.49
HERC3-204ENST00000422770 CD209Q9NNX6 404 aa12.01□□□□□ -0.49
HERC3-204ENST00000422770 CEP126Q9P2H0 1117 aa12.01□□□□□ -0.49
HERC3-204ENST00000422770 IQSEC3Q9UPP2 1182 aaPredicted RBP12.01□□□□□ -0.49
HERC3-204ENST00000422770 COG6Q9Y2V7 657 aa12.01□□□□□ -0.49
HERC3-204ENST00000422770 TRPM7Q96QT4 1865 aa12.01□□□□□ -0.49
HERC3-204ENST00000422770 F8W031 263 aaPredicted RBP12□□□□□ -0.49
HERC3-204ENST00000422770 PDE8BO95263 885 aa12□□□□□ -0.49
HERC3-204ENST00000422770 VIL1P09327 827 aaKnown RBP12□□□□□ -0.49
HERC3-204ENST00000422770 IFIT1P09914 478 aaKnown RBP12□□□□□ -0.49
HERC3-204ENST00000422770 HIBADHP31937 336 aaKnown RBP12□□□□□ -0.49
HERC3-204ENST00000422770 APLP1P51693 650 aa12□□□□□ -0.49
HERC3-204ENST00000422770 CHAF1AQ13111 956 aaPredicted RBP12□□□□□ -0.49
HERC3-204ENST00000422770 PUM3Q15397 648 aaKnown RBP12□□□□□ -0.49
HERC3-204ENST00000422770 CAVIN4Q5BKX8 364 aa12□□□□□ -0.49
HERC3-204ENST00000422770 DPF2Q92785 391 aa12□□□□□ -0.49
HERC3-204ENST00000422770 PNMA6EA0A0J9YXQ4 647 aa11.99□□□□□ -0.49
HERC3-204ENST00000422770 USP17L8P0C7I0 530 aa11.99□□□□□ -0.49
HERC3-204ENST00000422770 IL15P40933 162 aaPredicted RBP11.99□□□□□ -0.49
HERC3-204ENST00000422770 G3BP1Q13283 466 aaKnown RBP eCLIP11.99□□□□□ -0.49
HERC3-204ENST00000422770 MVPQ14764 893 aaKnown RBP11.99□□□□□ -0.49
HERC3-204ENST00000422770 ATP2B3Q16720 1220 aa11.99□□□□□ -0.49
HERC3-204ENST00000422770 KIF4BQ2VIQ3 1234 aa11.99□□□□□ -0.49
HERC3-204ENST00000422770 STRIP1Q5VSL9 837 aa11.99□□□□□ -0.49
HERC3-204ENST00000422770 ATG9AQ7Z3C6 839 aa11.99□□□□□ -0.49
HERC3-204ENST00000422770 KIAA0825Q8IV33 1275 aa11.99□□□□□ -0.49
HERC3-204ENST00000422770 AGBL3Q8NEM8 1001 aa11.99□□□□□ -0.49
HERC3-204ENST00000422770 MYO3BQ8WXR4 1341 aa11.99□□□□□ -0.49
HERC3-204ENST00000422770 ECM29Q5VYK3 1845 aa11.99□□□□□ -0.49
HERC3-204ENST00000422770 CIAO1O76071 339 aa11.98□□□□□ -0.49
HERC3-204ENST00000422770 HTRA3P83110 453 aa11.98□□□□□ -0.49
HERC3-204ENST00000422770 DACT2Q5SW24 774 aa11.98□□□□□ -0.49
HERC3-204ENST00000422770 C15orf52Q6ZUT6 534 aaKnown RBP11.98□□□□□ -0.49
HERC3-204ENST00000422770 CNTROBQ8N137 903 aa11.98□□□□□ -0.49
HERC3-204ENST00000422770 OGFOD1Q8N543 542 aa11.98□□□□□ -0.49
HERC3-204ENST00000422770 VGLL2Q8N8G2 317 aa11.98□□□□□ -0.49
HERC3-204ENST00000422770 BCL11AQ9H165 835 aa11.98□□□□□ -0.49
HERC3-204ENST00000422770 COPRSQ9NQ92 184 aa11.98□□□□□ -0.49
HERC3-204ENST00000422770 HDAC9Q9UKV0 1011 aa11.98□□□□□ -0.49
HERC3-204ENST00000422770 DDX19BQ9UMR2 479 aa11.98□□□□□ -0.49
HERC3-204ENST00000422770 IRS2Q9Y4H2 1338 aa11.97□□□□□ -0.49
HERC3-204ENST00000422770 ZBTB7BO15156 539 aaPredicted RBP11.97□□□□□ -0.49
HERC3-204ENST00000422770 BCAMP50895 628 aa11.97□□□□□ -0.49
HERC3-204ENST00000422770 RBM5P52756 815 aaKnown RBP eCLIP11.97□□□□□ -0.49
HERC3-204ENST00000422770 TFCP2Q12800 502 aa11.97□□□□□ -0.49
HERC3-204ENST00000422770 MTX1Q13505 466 aa11.97□□□□□ -0.49
HERC3-204ENST00000422770 C20orf194Q5TEA3 1177 aa11.97□□□□□ -0.49
HERC3-204ENST00000422770 LPIN2Q92539 896 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms