RNA–Protein interactions for RNA: ENST00000422622.3

SSPN-202, Transcript of sarcospan, humanhuman

TSL 2 BASIC

Gene SSPN, Length 4,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-202ENST00000422622 GJD4Q96KN9 370 aaPredicted RBP11.85□□□□□ -0.51
SSPN-202ENST00000422622 NEK1Q96PY6 1258 aa11.85□□□□□ -0.51
SSPN-202ENST00000422622 C6orf229H3BNL8 230 aa11.85□□□□□ -0.51
SSPN-202ENST00000422622 LSG1Q9H089 658 aaKnown RBP11.85□□□□□ -0.51
SSPN-202ENST00000422622 GNL3LQ9NVN8 582 aaKnown RBP11.85□□□□□ -0.51
SSPN-202ENST00000422622 ATG9AQ7Z3C6 839 aa11.85□□□□□ -0.51
SSPN-202ENST00000422622 TRPC5Q9UL62 973 aaPredicted RBP11.85□□□□□ -0.51
SSPN-202ENST00000422622 THRAP3Q9Y2W1 955 aaKnown RBP11.85□□□□□ -0.51
SSPN-202ENST00000422622 RNF113AO15541 343 aaKnown RBP11.84□□□□□ -0.51
SSPN-202ENST00000422622 ATP2B1P20020 1258 aa11.84□□□□□ -0.51
SSPN-202ENST00000422622 GJB2P29033 226 aa11.84□□□□□ -0.51
SSPN-202ENST00000422622 HSPA4P34932 840 aa11.84□□□□□ -0.51
SSPN-202ENST00000422622 TMEM132AQ24JP5 1023 aa11.84□□□□□ -0.51
SSPN-202ENST00000422622 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.84□□□□□ -0.51
SSPN-202ENST00000422622 PES1O00541 588 aaKnown RBP11.84□□□□□ -0.51
SSPN-202ENST00000422622 APBA3O96018 575 aa11.84□□□□□ -0.51
SSPN-202ENST00000422622 MAP3K12Q12852 859 aa11.84□□□□□ -0.51
SSPN-202ENST00000422622 IMMTQ16891 758 aaKnown RBP11.84□□□□□ -0.51
SSPN-202ENST00000422622 GPR101Q96P66 508 aaPredicted RBP11.84□□□□□ -0.51
SSPN-202ENST00000422622 TBC1D9BQ66K14 1250 aa11.84□□□□□ -0.51
SSPN-202ENST00000422622 FAM173BQ6P4H8 233 aa11.84□□□□□ -0.51
SSPN-202ENST00000422622 Q6ZUG5 572 aa11.84□□□□□ -0.51
SSPN-202ENST00000422622 HOMER1Q86YM7 354 aa11.84□□□□□ -0.51
SSPN-202ENST00000422622 NUP133Q8WUM0 1156 aa11.84□□□□□ -0.51
SSPN-202ENST00000422622 NAPBQ9H115 298 aa11.84□□□□□ -0.51
SSPN-202ENST00000422622 ATP6V1DQ9Y5K8 247 aa11.84□□□□□ -0.51
SSPN-202ENST00000422622 JCADQ9P266 1359 aa11.83□□□□□ -0.52
SSPN-202ENST00000422622 F8W031 263 aaPredicted RBP11.83□□□□□ -0.52
SSPN-202ENST00000422622 ZNF213O14771 459 aa11.83□□□□□ -0.52
SSPN-202ENST00000422622 RFX5P48382 616 aaPredicted RBP11.83□□□□□ -0.52
SSPN-202ENST00000422622 CCDC102BQ68D86 513 aa11.83□□□□□ -0.52
SSPN-202ENST00000422622 SPC24Q8NBT2 197 aa11.83□□□□□ -0.52
SSPN-202ENST00000422622 TAF6LQ9Y6J9 622 aa11.83□□□□□ -0.52
SSPN-202ENST00000422622 UBN2Q6ZU65 1347 aa11.83□□□□□ -0.52
SSPN-202ENST00000422622 BAG4O95429 457 aaKnown RBP11.83□□□□□ -0.52
SSPN-202ENST00000422622 TPM4P67936 248 aa11.83□□□□□ -0.52
SSPN-202ENST00000422622 RBM27Q9P2N5 1060 aaKnown RBP11.83□□□□□ -0.52
SSPN-202ENST00000422622 U3KPZ7 1027 aaPredicted RBP11.83□□□□□ -0.52
SSPN-202ENST00000422622 TFIP11Q9UBB9 837 aaKnown RBP11.83□□□□□ -0.52
SSPN-202ENST00000422622 STRCP1A6NGW2 1772 aa11.82□□□□□ -0.52
SSPN-202ENST00000422622 CYP7A1P22680 504 aa11.82□□□□□ -0.52
SSPN-202ENST00000422622 APOBRQ0VD83 1088 aa11.82□□□□□ -0.52
SSPN-202ENST00000422622 PARP10Q53GL7 1025 aa11.82□□□□□ -0.52
SSPN-202ENST00000422622 CNBD1Q8NA66 436 aa11.82□□□□□ -0.52
SSPN-202ENST00000422622 ZNF622Q969S3 477 aaKnown RBP eCLIP11.82□□□□□ -0.52
SSPN-202ENST00000422622 AOX1Q06278 1338 aa11.82□□□□□ -0.52
SSPN-202ENST00000422622 RIMBP2O15034 1052 aa11.82□□□□□ -0.52
SSPN-202ENST00000422622 EIF5P55010 431 aaKnown RBP11.82□□□□□ -0.52
SSPN-202ENST00000422622 PUM3Q15397 648 aaKnown RBP11.82□□□□□ -0.52
SSPN-202ENST00000422622 INTS5Q6P9B9 1019 aaKnown RBP11.82□□□□□ -0.52
SSPN-202ENST00000422622 LRP10Q7Z4F1 713 aa11.82□□□□□ -0.52
SSPN-202ENST00000422622 HAUS7Q99871 368 aa11.82□□□□□ -0.52
SSPN-202ENST00000422622 ARMT1Q9H993 441 aa11.82□□□□□ -0.52
SSPN-202ENST00000422622 CWC22Q9HCG8 908 aaKnown RBP11.82□□□□□ -0.52
SSPN-202ENST00000422622 PRDM10Q9NQV6 1147 aa11.82□□□□□ -0.52
SSPN-202ENST00000422622 PDE8BO95263 885 aa11.82□□□□□ -0.52
SSPN-202ENST00000422622 CHRNDQ07001 517 aa11.82□□□□□ -0.52
SSPN-202ENST00000422622 ZKSCAN3Q9BRR0 538 aa11.82□□□□□ -0.52
SSPN-202ENST00000422622 NCOA5Q9HCD5 579 aaKnown RBP11.82□□□□□ -0.52
SSPN-202ENST00000422622 WTIPA6NIX2 430 aaPredicted RBP11.82□□□□□ -0.52
SSPN-202ENST00000422622 VPS72Q15906 364 aa11.82□□□□□ -0.52
SSPN-202ENST00000422622 RABL6Q3YEC7 729 aaPredicted RBP11.82□□□□□ -0.52
SSPN-202ENST00000422622 GPAA1O43292 621 aa11.81□□□□□ -0.52
SSPN-202ENST00000422622 MBD4O95243 580 aa11.81□□□□□ -0.52
SSPN-202ENST00000422622 LARGE1O95461 756 aa11.81□□□□□ -0.52
SSPN-202ENST00000422622 GOLGA6L1Q8N7Z2 621 aa11.81□□□□□ -0.52
SSPN-202ENST00000422622 ANAPC15P60006 121 aa11.81□□□□□ -0.52
SSPN-202ENST00000422622 ZSCAN25Q6NSZ9 544 aa11.81□□□□□ -0.52
SSPN-202ENST00000422622 KRT27Q7Z3Y8 459 aa11.81□□□□□ -0.52
SSPN-202ENST00000422622 MICU3Q86XE3 530 aa11.81□□□□□ -0.52
SSPN-202ENST00000422622 ARHGEF1Q92888 912 aaKnown RBP11.81□□□□□ -0.52
SSPN-202ENST00000422622 RGPD1P0DJD0 1748 aa11.81□□□□□ -0.52
SSPN-202ENST00000422622 A0A0G2JLW4 131 aa11.8□□□□□ -0.52
SSPN-202ENST00000422622 RUFY3Q7L099 469 aa11.8□□□□□ -0.52
SSPN-202ENST00000422622 CELF1Q92879 486 aaKnown RBP11.8□□□□□ -0.52
SSPN-202ENST00000422622 OSBP2Q969R2 916 aa11.8□□□□□ -0.52
SSPN-202ENST00000422622 CIZ1Q9ULV3 898 aaPredicted RBP11.8□□□□□ -0.52
SSPN-202ENST00000422622 ZNF532Q9HCE3 1301 aa11.8□□□□□ -0.52
SSPN-202ENST00000422622 COL15A1P39059 1388 aa11.8□□□□□ -0.52
SSPN-202ENST00000422622 SAMD1Q6SPF0 538 aaPredicted RBP11.8□□□□□ -0.52
SSPN-202ENST00000422622 SYNE3Q6ZMZ3 975 aa11.8□□□□□ -0.52
SSPN-202ENST00000422622 MCAMP43121 646 aa11.8□□□□□ -0.52
SSPN-202ENST00000422622 KRT32Q14532 448 aa11.8□□□□□ -0.52
SSPN-202ENST00000422622 LPIN2Q92539 896 aa11.8□□□□□ -0.52
SSPN-202ENST00000422622 PUS7LQ9H0K6 701 aaKnown RBP11.8□□□□□ -0.52
SSPN-202ENST00000422622 SLC4A4Q9Y6R1 1079 aa11.8□□□□□ -0.52
SSPN-202ENST00000422622 M0R2C6 588 aa11.79□□□□□ -0.52
SSPN-202ENST00000422622 PRDM1O75626 825 aa11.79□□□□□ -0.52
SSPN-202ENST00000422622 DZIP1Q86YF9 867 aaKnown RBP11.79□□□□□ -0.52
SSPN-202ENST00000422622 RASSF8Q8NHQ8 419 aa11.79□□□□□ -0.52
SSPN-202ENST00000422622 NOC3LQ8WTT2 800 aaKnown RBP11.79□□□□□ -0.52
SSPN-202ENST00000422622 CTNNA3Q9UI47 895 aa11.79□□□□□ -0.52
SSPN-202ENST00000422622 SALL3Q9BXA9 1300 aa11.79□□□□□ -0.52
SSPN-202ENST00000422622 RANBP6O60518 1105 aaKnown RBP11.79□□□□□ -0.52
SSPN-202ENST00000422622 CAMTA2O94983 1202 aa11.79□□□□□ -0.52
SSPN-202ENST00000422622 CASP7P55210 303 aa11.79□□□□□ -0.52
SSPN-202ENST00000422622 SPATA5Q8NB90 893 aa11.79□□□□□ -0.52
SSPN-202ENST00000422622 NOL10Q9BSC4 688 aaKnown RBP11.79□□□□□ -0.52
SSPN-202ENST00000422622 WDR33Q9C0J8 1336 aaKnown RBP11.79□□□□□ -0.52
SSPN-202ENST00000422622 ERICH2A1L162 156 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms