RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 LEMD3Q9Y2U8 911 aa14.71□□□□□ -0.05
SQSTM1-203ENST00000422245 CA12O43570 354 aa14.7□□□□□ -0.06
SQSTM1-203ENST00000422245 CSF1RP07333 972 aa14.7□□□□□ -0.06
SQSTM1-203ENST00000422245 USP17L8P0C7I0 530 aa14.7□□□□□ -0.06
SQSTM1-203ENST00000422245 BRPF1P55201 1214 aaPredicted RBP14.7□□□□□ -0.06
SQSTM1-203ENST00000422245 HUNKP57058 714 aa14.7□□□□□ -0.06
SQSTM1-203ENST00000422245 COA1Q9GZY4 146 aa14.7□□□□□ -0.06
SQSTM1-203ENST00000422245 GBA2Q9HCG7 927 aaPredicted RBP14.7□□□□□ -0.06
SQSTM1-203ENST00000422245 SPINK5Q9NQ38 1064 aaPredicted RBP14.7□□□□□ -0.06
SQSTM1-203ENST00000422245 MYO3BQ8WXR4 1341 aa14.69□□□□□ -0.06
SQSTM1-203ENST00000422245 ZNF646O15015 1829 aaPredicted RBP14.69□□□□□ -0.06
SQSTM1-203ENST00000422245 AOC2O75106 756 aa14.69□□□□□ -0.06
SQSTM1-203ENST00000422245 NOGQ13253 232 aa14.69□□□□□ -0.06
SQSTM1-203ENST00000422245 BEND3Q5T5X7 828 aa14.69□□□□□ -0.06
SQSTM1-203ENST00000422245 MYOZ2Q9NPC6 264 aa14.69□□□□□ -0.06
SQSTM1-203ENST00000422245 ZNF804BA4D1E1 1349 aa14.68□□□□□ -0.06
SQSTM1-203ENST00000422245 PITPNM2Q9BZ72 1349 aa14.68□□□□□ -0.06
SQSTM1-203ENST00000422245 ANKRD18BA2A2Z9 1011 aa14.68□□□□□ -0.06
SQSTM1-203ENST00000422245 F6X3S4 739 aa14.68□□□□□ -0.06
SQSTM1-203ENST00000422245 STRIP1Q5VSL9 837 aa14.68□□□□□ -0.06
SQSTM1-203ENST00000422245 C2orf69Q8N8R5 385 aa14.68□□□□□ -0.06
SQSTM1-203ENST00000422245 ASTN2O75129 1339 aaPredicted RBP14.67□□□□□ -0.06
SQSTM1-203ENST00000422245 WTIPA6NIX2 430 aaPredicted RBP14.67□□□□□ -0.06
SQSTM1-203ENST00000422245 KCNJ4P48050 445 aa14.67□□□□□ -0.06
SQSTM1-203ENST00000422245 IFIT5Q13325 482 aaKnown RBP14.67□□□□□ -0.06
SQSTM1-203ENST00000422245 SCARF1Q14162 830 aa14.67□□□□□ -0.06
SQSTM1-203ENST00000422245 DACT2Q5SW24 774 aa14.67□□□□□ -0.06
SQSTM1-203ENST00000422245 ANGEL2Q5VTE6 544 aaKnown RBP14.67□□□□□ -0.06
SQSTM1-203ENST00000422245 RGMBQ6NW40 437 aa14.67□□□□□ -0.06
SQSTM1-203ENST00000422245 DLK2Q6UY11 383 aa14.67□□□□□ -0.06
SQSTM1-203ENST00000422245 CDCA5Q96FF9 252 aa14.67□□□□□ -0.06
SQSTM1-203ENST00000422245 ZNF521Q96K83 1311 aa14.66□□□□□ -0.06
SQSTM1-203ENST00000422245 A0A1B0GUL6 1792 aa14.66□□□□□ -0.06
SQSTM1-203ENST00000422245 MMP14P50281 582 aa14.66□□□□□ -0.06
SQSTM1-203ENST00000422245 CHRNDQ07001 517 aa14.66□□□□□ -0.06
SQSTM1-203ENST00000422245 OGFOD1Q8N543 542 aa14.66□□□□□ -0.06
SQSTM1-203ENST00000422245 FBXW7Q969H0 707 aa14.66□□□□□ -0.06
SQSTM1-203ENST00000422245 GRM8O00222 908 aa14.65□□□□□ -0.06
SQSTM1-203ENST00000422245 ALDH1L1O75891 902 aa14.65□□□□□ -0.06
SQSTM1-203ENST00000422245 KLRK1P26718 216 aa14.65□□□□□ -0.06
SQSTM1-203ENST00000422245 FOXO4P98177 505 aa14.65□□□□□ -0.06
SQSTM1-203ENST00000422245 TXNRD3Q86VQ6 643 aa14.65□□□□□ -0.06
SQSTM1-203ENST00000422245 CCDC102AQ96A19 550 aa14.65□□□□□ -0.06
SQSTM1-203ENST00000422245 CHMP3Q9Y3E7 222 aa14.65□□□□□ -0.06
SQSTM1-203ENST00000422245 PAPPA2Q9BXP8 1791 aa14.65□□□□□ -0.06
SQSTM1-203ENST00000422245 FKBP1BP68106 108 aa14.64□□□□□ -0.07
SQSTM1-203ENST00000422245 C15orf52Q6ZUT6 534 aaKnown RBP14.64□□□□□ -0.07
SQSTM1-203ENST00000422245 SRCIN1Q9C0H9 1055 aa14.64□□□□□ -0.07
SQSTM1-203ENST00000422245 FAM155AB1AL88 458 aaPredicted RBP14.63□□□□□ -0.07
SQSTM1-203ENST00000422245 ZNF157P51786 506 aaPredicted RBP14.63□□□□□ -0.07
SQSTM1-203ENST00000422245 CCDC57Q2TAC2 916 aa14.63□□□□□ -0.07
SQSTM1-203ENST00000422245 TAF7LQ5H9L4 462 aa14.63□□□□□ -0.07
SQSTM1-203ENST00000422245 TTLL5Q6EMB2 1281 aa14.63□□□□□ -0.07
SQSTM1-203ENST00000422245 LMBR1LQ6UX01 489 aa14.63□□□□□ -0.07
SQSTM1-203ENST00000422245 MXD3Q9BW11 206 aa14.63□□□□□ -0.07
SQSTM1-203ENST00000422245 C9orf78Q9NZ63 289 aaPredicted RBP14.63□□□□□ -0.07
SQSTM1-203ENST00000422245 HDAC9Q9UKV0 1011 aa14.63□□□□□ -0.07
SQSTM1-203ENST00000422245 SLC10A3P09131 477 aa14.62□□□□□ -0.07
SQSTM1-203ENST00000422245 SLC4A10Q6U841 1118 aa14.62□□□□□ -0.07
SQSTM1-203ENST00000422245 ZNF804AQ7Z570 1209 aa14.62□□□□□ -0.07
SQSTM1-203ENST00000422245 TSKSQ9UJT2 592 aa14.62□□□□□ -0.07
SQSTM1-203ENST00000422245 IRS2Q9Y4H2 1338 aa14.62□□□□□ -0.07
SQSTM1-203ENST00000422245 E9PSI1 815 aa14.61□□□□□ -0.07
SQSTM1-203ENST00000422245 WNT10BO00744 389 aa14.61□□□□□ -0.07
SQSTM1-203ENST00000422245 GTF2IP78347 998 aa14.61□□□□□ -0.07
SQSTM1-203ENST00000422245 NBPF9Q3BBW0 867 aa14.61□□□□□ -0.07
SQSTM1-203ENST00000422245 EPHA10Q5JZY3 1008 aa14.61□□□□□ -0.07
SQSTM1-203ENST00000422245 ABHD8Q96I13 439 aa14.61□□□□□ -0.07
SQSTM1-203ENST00000422245 ZIC5Q96T25 663 aa14.61□□□□□ -0.07
SQSTM1-203ENST00000422245 CD209Q9NNX6 404 aa14.61□□□□□ -0.07
SQSTM1-203ENST00000422245 SAGE1Q9NXZ1 904 aa14.61□□□□□ -0.07
SQSTM1-203ENST00000422245 TAF5LO75529 589 aa14.6□□□□□ -0.07
SQSTM1-203ENST00000422245 SASH1O94885 1247 aa14.6□□□□□ -0.07
SQSTM1-203ENST00000422245 LDHAL6AQ6ZMR3 332 aa14.6□□□□□ -0.07
SQSTM1-203ENST00000422245 APOBEC3FQ8IUX4 373 aaKnown RBP14.6□□□□□ -0.07
SQSTM1-203ENST00000422245 KIAA0825Q8IV33 1275 aa14.6□□□□□ -0.07
SQSTM1-203ENST00000422245 HELBQ8NG08 1087 aaPredicted RBP14.6□□□□□ -0.07
SQSTM1-203ENST00000422245 CNNM1Q9NRU3 951 aa14.6□□□□□ -0.07
SQSTM1-203ENST00000422245 AKAP11Q9UKA4 1901 aa14.6□□□□□ -0.07
SQSTM1-203ENST00000422245 PTPRCP08575 1304 aa14.6□□□□□ -0.07
SQSTM1-203ENST00000422245 IL1R1P14778 569 aa14.59□□□□□ -0.07
SQSTM1-203ENST00000422245 NF2P35240 595 aa14.59□□□□□ -0.07
SQSTM1-203ENST00000422245 KIF23Q02241 960 aaPredicted RBP14.59□□□□□ -0.07
SQSTM1-203ENST00000422245 RASAL3Q86YV0 1011 aa14.59□□□□□ -0.07
SQSTM1-203ENST00000422245 REM2Q8IYK8 340 aaPredicted RBP14.59□□□□□ -0.07
SQSTM1-203ENST00000422245 UTYO14607 1347 aa14.59□□□□□ -0.07
SQSTM1-203ENST00000422245 CASP8AP2Q9UKL3 1982 aa14.58□□□□□ -0.07
SQSTM1-203ENST00000422245 COL1A1P02452 1464 aaPredicted RBP14.58□□□□□ -0.08
SQSTM1-203ENST00000422245 ECM29Q5VYK3 1845 aa14.58□□□□□ -0.08
SQSTM1-203ENST00000422245 SNAP23O00161 211 aa14.58□□□□□ -0.08
SQSTM1-203ENST00000422245 FKBP1AP62942 108 aaKnown RBP14.58□□□□□ -0.08
SQSTM1-203ENST00000422245 MRPL50Q8N5N7 158 aaKnown RBP14.58□□□□□ -0.08
SQSTM1-203ENST00000422245 SUCLG2Q96I99 432 aa14.58□□□□□ -0.08
SQSTM1-203ENST00000422245 ZBED3Q96IU2 234 aaPredicted RBP14.58□□□□□ -0.08
SQSTM1-203ENST00000422245 ZNF594Q96JF6 807 aaPredicted RBP14.58□□□□□ -0.08
SQSTM1-203ENST00000422245 CERS5Q8N5B7 392 aa14.57□□□□□ -0.08
SQSTM1-203ENST00000422245 NBPF7P0C2Y1 421 aaPredicted RBP14.56□□□□□ -0.08
SQSTM1-203ENST00000422245 UBE4AQ14139 1066 aa14.56□□□□□ -0.08
SQSTM1-203ENST00000422245 TTLL12Q14166 644 aaPredicted RBP14.56□□□□□ -0.08
SQSTM1-203ENST00000422245 DLGAP5Q15398 846 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms