RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 GINS2Q9Y248 185 aa15.33■□□□□ 0.04
COL20A1-203ENST00000422202 AFG3L2Q9Y4W6 797 aa15.33■□□□□ 0.04
COL20A1-203ENST00000422202 SLC52A1Q9NWF4 448 aa15.32■□□□□ 0.04
COL20A1-203ENST00000422202 ZBTB43O43298 467 aa15.32■□□□□ 0.04
COL20A1-203ENST00000422202 ZSCAN30Q86W11 494 aa15.32■□□□□ 0.04
COL20A1-203ENST00000422202 LMBR1Q8WVP7 490 aa15.32■□□□□ 0.04
COL20A1-203ENST00000422202 DBF4Q9UBU7 674 aaPredicted RBP15.32■□□□□ 0.04
COL20A1-203ENST00000422202 MCM6Q14566 821 aa15.32■□□□□ 0.04
COL20A1-203ENST00000422202 ALG1Q9BT22 464 aa15.32■□□□□ 0.04
COL20A1-203ENST00000422202 RAB3GAP1Q15042 981 aa15.32■□□□□ 0.04
COL20A1-203ENST00000422202 JAKMIP2Q96AA8 810 aa15.32■□□□□ 0.04
COL20A1-203ENST00000422202 DDX19AQ9NUU7 478 aaKnown RBP15.32■□□□□ 0.04
COL20A1-203ENST00000422202 FEZ2Q9UHY8 353 aaPredicted RBP15.32■□□□□ 0.04
COL20A1-203ENST00000422202 HSPA1LP34931 641 aa15.32■□□□□ 0.04
COL20A1-203ENST00000422202 FLIIQ13045 1269 aa15.32■□□□□ 0.04
COL20A1-203ENST00000422202 GPR162Q16538 588 aa15.32■□□□□ 0.04
COL20A1-203ENST00000422202 NAA16Q6N069 864 aaPredicted RBP15.32■□□□□ 0.04
COL20A1-203ENST00000422202 FRMD4BQ9Y2L6 1034 aa15.32■□□□□ 0.04
COL20A1-203ENST00000422202 NEMFO60524 1076 aa15.31■□□□□ 0.04
COL20A1-203ENST00000422202 CCDC61Q9Y6R9 512 aa15.31■□□□□ 0.04
COL20A1-203ENST00000422202 ALDH3A1P30838 453 aa15.31■□□□□ 0.04
COL20A1-203ENST00000422202 TTC14Q96N46 770 aa15.31■□□□□ 0.04
COL20A1-203ENST00000422202 TTLL3Q9Y4R7 772 aa15.31■□□□□ 0.04
COL20A1-203ENST00000422202 NOP9Q86U38 636 aaKnown RBP15.31■□□□□ 0.04
COL20A1-203ENST00000422202 IFT81Q8WYA0 676 aa15.31■□□□□ 0.04
COL20A1-203ENST00000422202 FAM135AQ9P2D6 1515 aa15.31■□□□□ 0.04
COL20A1-203ENST00000422202 NEK11Q8NG66 645 aa15.31■□□□□ 0.04
COL20A1-203ENST00000422202 MAGEB6P1A0A0J9YX57 407 aa15.31■□□□□ 0.04
COL20A1-203ENST00000422202 ESR2Q92731 530 aa15.31■□□□□ 0.04
COL20A1-203ENST00000422202 MCM7P33993 719 aa15.3■□□□□ 0.04
COL20A1-203ENST00000422202 KRT28Q7Z3Y7 464 aa15.3■□□□□ 0.04
COL20A1-203ENST00000422202 MRRFQ96E11 262 aaKnown RBP15.3■□□□□ 0.04
COL20A1-203ENST00000422202 RRP9O43818 475 aaKnown RBP15.3■□□□□ 0.04
COL20A1-203ENST00000422202 ATXN8OSP0DMR3 200 aa15.3■□□□□ 0.04
COL20A1-203ENST00000422202 C9orf84Q5VXU9 1444 aa15.3■□□□□ 0.04
COL20A1-203ENST00000422202 FGD5Q6ZNL6 1462 aa15.3■□□□□ 0.04
COL20A1-203ENST00000422202 ITIH3Q06033 890 aa15.3■□□□□ 0.04
COL20A1-203ENST00000422202 PSMD6Q15008 389 aa15.3■□□□□ 0.04
COL20A1-203ENST00000422202 FNBP1Q96RU3 617 aa15.3■□□□□ 0.04
COL20A1-203ENST00000422202 TSHZ3Q63HK5 1081 aa15.3■□□□□ 0.04
COL20A1-203ENST00000422202 LRRC2Q9BYS8 371 aa15.3■□□□□ 0.04
COL20A1-203ENST00000422202 KIF3CO14782 793 aa15.3■□□□□ 0.04
COL20A1-203ENST00000422202 INF2Q27J81 1249 aa15.3■□□□□ 0.04
COL20A1-203ENST00000422202 UBLCP1Q8WVY7 318 aaPredicted RBP15.3■□□□□ 0.04
COL20A1-203ENST00000422202 ERICH3Q5RHP9 1530 aa15.29■□□□□ 0.04
COL20A1-203ENST00000422202 STX10O60499 249 aa15.29■□□□□ 0.04
COL20A1-203ENST00000422202 MARCKSP29966 332 aaPredicted RBP15.29■□□□□ 0.04
COL20A1-203ENST00000422202 WDR44Q5JSH3 913 aa15.29■□□□□ 0.04
COL20A1-203ENST00000422202 JAG2Q9Y219 1238 aa15.29■□□□□ 0.04
COL20A1-203ENST00000422202 KLF18A0A0U1RQI7 1052 aa15.29■□□□□ 0.04
COL20A1-203ENST00000422202 PSMA7O14818 248 aa15.29■□□□□ 0.04
COL20A1-203ENST00000422202 NLRP3Q96P20 1036 aa15.29■□□□□ 0.04
COL20A1-203ENST00000422202 ZC3H12CQ9C0D7 883 aaKnown RBP15.29■□□□□ 0.04
COL20A1-203ENST00000422202 CEP120Q8N960 986 aa15.29■□□□□ 0.04
COL20A1-203ENST00000422202 TMOD4Q9NZQ9 345 aa15.29■□□□□ 0.04
COL20A1-203ENST00000422202 TNNI2P48788 182 aa15.29■□□□□ 0.04
COL20A1-203ENST00000422202 UBXN1Q04323 297 aa15.29■□□□□ 0.04
COL20A1-203ENST00000422202 HECW1Q76N89 1606 aa15.29■□□□□ 0.04
COL20A1-203ENST00000422202 NOP56O00567 594 aaKnown RBP15.29■□□□□ 0.04
COL20A1-203ENST00000422202 TACC1O75410 805 aa15.29■□□□□ 0.04
COL20A1-203ENST00000422202 ERCC6LQ2NKX8 1250 aa15.29■□□□□ 0.04
COL20A1-203ENST00000422202 ANKFY1Q9P2R3 1169 aa15.29■□□□□ 0.04
COL20A1-203ENST00000422202 DNAJC21Q5F1R6 531 aaKnown RBP15.28■□□□□ 0.04
COL20A1-203ENST00000422202 CCDC170Q8IYT3 715 aa15.28■□□□□ 0.04
COL20A1-203ENST00000422202 BACH2Q9BYV9 841 aa15.28■□□□□ 0.04
COL20A1-203ENST00000422202 NYXQ9GZU5 481 aa15.28■□□□□ 0.04
COL20A1-203ENST00000422202 ZNF165P49910 485 aa15.28■□□□□ 0.04
COL20A1-203ENST00000422202 RAPGEF1Q13905 1077 aa15.28■□□□□ 0.04
COL20A1-203ENST00000422202 DIXDC1Q155Q3 683 aa15.28■□□□□ 0.04
COL20A1-203ENST00000422202 EAPPQ56P03 285 aaPredicted RBP15.28■□□□□ 0.04
COL20A1-203ENST00000422202 UQCRFS1P1P0C7P4 283 aa15.28■□□□□ 0.04
COL20A1-203ENST00000422202 HS2ST1Q7LGA3 356 aa15.28■□□□□ 0.04
COL20A1-203ENST00000422202 CNNM2Q9H8M5 875 aa15.28■□□□□ 0.04
COL20A1-203ENST00000422202 FAM204AQ9H8W3 233 aa15.28■□□□□ 0.04
COL20A1-203ENST00000422202 POLA1P09884 1462 aaPredicted RBP15.28■□□□□ 0.04
COL20A1-203ENST00000422202 ZEB2O60315 1214 aa15.28■□□□□ 0.04
COL20A1-203ENST00000422202 PLIN2Q99541 437 aa15.28■□□□□ 0.04
COL20A1-203ENST00000422202 KRT2P35908 639 aa15.28■□□□□ 0.04
COL20A1-203ENST00000422202 OPA1O60313 960 aa15.27■□□□□ 0.04
COL20A1-203ENST00000422202 CCDC110Q8TBZ0 833 aa15.27■□□□□ 0.04
COL20A1-203ENST00000422202 KIFAP3Q92845 792 aa15.27■□□□□ 0.04
COL20A1-203ENST00000422202 DHX58Q96C10 678 aa15.27■□□□□ 0.04
COL20A1-203ENST00000422202 HAUS2Q9NVX0 235 aa15.27■□□□□ 0.04
COL20A1-203ENST00000422202 STIM2Q9P246 746 aa15.27■□□□□ 0.04
COL20A1-203ENST00000422202 CIB2O75838 187 aa15.27■□□□□ 0.04
COL20A1-203ENST00000422202 STK10O94804 968 aaKnown RBP15.27■□□□□ 0.04
COL20A1-203ENST00000422202 FAM160A1Q05DH4 1040 aa15.27■□□□□ 0.04
COL20A1-203ENST00000422202 BIRC3Q13489 604 aa15.27■□□□□ 0.04
COL20A1-203ENST00000422202 CCDC121Q6ZUS5 278 aa15.27■□□□□ 0.04
COL20A1-203ENST00000422202 NIP7Q9Y221 180 aaKnown RBP eCLIP15.27■□□□□ 0.04
COL20A1-203ENST00000422202 NCOA2Q15596 1464 aa15.27■□□□□ 0.04
COL20A1-203ENST00000422202 CPLX4Q7Z7G2 160 aa15.27■□□□□ 0.04
COL20A1-203ENST00000422202 CEP57Q86XR8 500 aa15.27■□□□□ 0.04
COL20A1-203ENST00000422202 ANO3Q9BYT9 981 aa15.27■□□□□ 0.04
COL20A1-203ENST00000422202 RBM27Q9P2N5 1060 aaKnown RBP15.27■□□□□ 0.04
COL20A1-203ENST00000422202 PPME1Q9Y570 386 aa15.27■□□□□ 0.04
COL20A1-203ENST00000422202 AK9Q5TCS8 1911 aa15.27■□□□□ 0.03
COL20A1-203ENST00000422202 CCDC169A6NNP5 214 aa15.27■□□□□ 0.03
COL20A1-203ENST00000422202 CEP85LQ5SZL2 805 aa15.27■□□□□ 0.03
COL20A1-203ENST00000422202 AQRO60306 1485 aaKnown RBP eCLIP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms