RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 TAF12Q16514 161 aa12.67□□□□□ -0.38
FN1-207ENST00000421182 MACROD2A1Z1Q3 448 aa12.67□□□□□ -0.38
FN1-207ENST00000421182 CCT2P78371 535 aaKnown RBP12.66□□□□□ -0.38
FN1-207ENST00000421182 MRPS9P82933 396 aaKnown RBP12.66□□□□□ -0.38
FN1-207ENST00000421182 CCDC14Q49A88 953 aa12.66□□□□□ -0.38
FN1-207ENST00000421182 COPS6Q7L5N1 327 aa12.66□□□□□ -0.38
FN1-207ENST00000421182 EDC4Q6P2E9 1401 aaKnown RBP12.66□□□□□ -0.38
FN1-207ENST00000421182 SNX16P57768 344 aa12.66□□□□□ -0.38
FN1-207ENST00000421182 SMC1AQ14683 1233 aaKnown RBP12.66□□□□□ -0.38
FN1-207ENST00000421182 HEATR3Q7Z4Q2 680 aa12.66□□□□□ -0.38
FN1-207ENST00000421182 BTG4Q9NY30 223 aa12.66□□□□□ -0.38
FN1-207ENST00000421182 SPAG1Q07617 926 aa12.66□□□□□ -0.38
FN1-207ENST00000421182 SELENOOQ9BVL4 669 aa12.66□□□□□ -0.38
FN1-207ENST00000421182 SLC5A4Q9NY91 659 aa12.66□□□□□ -0.38
FN1-207ENST00000421182 USP21Q9UK80 565 aa12.66□□□□□ -0.38
FN1-207ENST00000421182 BICDL2A1A5D9 508 aa12.66□□□□□ -0.38
FN1-207ENST00000421182 SMARCA5O60264 1052 aaPredicted RBP12.66□□□□□ -0.38
FN1-207ENST00000421182 PAG1Q9NWQ8 432 aa12.66□□□□□ -0.38
FN1-207ENST00000421182 UBE2HP62256 183 aa12.65□□□□□ -0.38
FN1-207ENST00000421182 LINS1Q8NG48 757 aa12.65□□□□□ -0.38
FN1-207ENST00000421182 GAS8O95995 478 aa12.65□□□□□ -0.38
FN1-207ENST00000421182 BIN2Q9UBW5 565 aaPredicted RBP12.65□□□□□ -0.38
FN1-207ENST00000421182 TBX22Q9Y458 520 aa12.65□□□□□ -0.38
FN1-207ENST00000421182 SLC8A3P57103 927 aa12.65□□□□□ -0.38
FN1-207ENST00000421182 IP6K1Q92551 441 aa12.65□□□□□ -0.38
FN1-207ENST00000421182 GOPCQ9HD26 462 aa12.65□□□□□ -0.38
FN1-207ENST00000421182 PPP1R2P41236 205 aa12.65□□□□□ -0.38
FN1-207ENST00000421182 WDR66Q8TBY9 1149 aa12.65□□□□□ -0.38
FN1-207ENST00000421182 CCDC87Q9NVE4 849 aa12.65□□□□□ -0.38
FN1-207ENST00000421182 UGGT1Q9NYU2 1555 aa12.65□□□□□ -0.38
FN1-207ENST00000421182 TET3O43151 1660 aa12.65□□□□□ -0.38
FN1-207ENST00000421182 GNPATO15228 680 aa12.65□□□□□ -0.38
FN1-207ENST00000421182 ZNF772Q68DY9 489 aaPredicted RBP12.65□□□□□ -0.38
FN1-207ENST00000421182 EFCAB6Q5THR3 1501 aa12.65□□□□□ -0.38
FN1-207ENST00000421182 HS2ST1Q7LGA3 356 aa12.64□□□□□ -0.39
FN1-207ENST00000421182 DISP1Q96F81 1524 aa12.64□□□□□ -0.39
FN1-207ENST00000421182 NSFL1CQ9UNZ2 370 aaKnown RBP12.64□□□□□ -0.39
FN1-207ENST00000421182 PSMA7O14818 248 aa12.64□□□□□ -0.39
FN1-207ENST00000421182 KCNA6P17658 529 aa12.64□□□□□ -0.39
FN1-207ENST00000421182 NOP2P46087 812 aaKnown RBP12.64□□□□□ -0.39
FN1-207ENST00000421182 GPHNQ9NQX3 736 aaPredicted RBP12.64□□□□□ -0.39
FN1-207ENST00000421182 MCM4P33991 863 aa12.64□□□□□ -0.39
FN1-207ENST00000421182 BAG6P46379 1132 aa12.64□□□□□ -0.39
FN1-207ENST00000421182 TUBB4BP68371 445 aa12.64□□□□□ -0.39
FN1-207ENST00000421182 KCNG1Q9UIX4 513 aa12.64□□□□□ -0.39
FN1-207ENST00000421182 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.64□□□□□ -0.394e-6■■■□□ 15.9
FN1-207ENST00000421182 ITSN1Q15811 1721 aa12.64□□□□□ -0.39
FN1-207ENST00000421182 PICALMQ13492 652 aa12.64□□□□□ -0.39
FN1-207ENST00000421182 BMS1Q14692 1282 aaKnown RBP12.64□□□□□ -0.39
FN1-207ENST00000421182 KIF4BQ2VIQ3 1234 aa12.64□□□□□ -0.39
FN1-207ENST00000421182 RASAL2Q9UJF2 1139 aa12.64□□□□□ -0.39
FN1-207ENST00000421182 YEATS2Q9ULM3 1422 aa12.64□□□□□ -0.39
FN1-207ENST00000421182 IRS4O14654 1257 aaPredicted RBP12.64□□□□□ -0.39
FN1-207ENST00000421182 IVNS1ABPQ9Y6Y0 642 aa12.64□□□□□ -0.39
FN1-207ENST00000421182 SYKP43405 635 aa12.64□□□□□ -0.39
FN1-207ENST00000421182 ARHGEF6Q15052 776 aa12.64□□□□□ -0.39
FN1-207ENST00000421182 NFATC2IPQ8NCF5 419 aa12.64□□□□□ -0.39
FN1-207ENST00000421182 TRIM47Q96LD4 638 aa12.64□□□□□ -0.39
FN1-207ENST00000421182 COL17A1Q9UMD9 1497 aaPredicted RBP12.63□□□□□ -0.39
FN1-207ENST00000421182 TTC22Q5TAA0 569 aa12.63□□□□□ -0.39
FN1-207ENST00000421182 GRM1Q13255 1194 aa12.63□□□□□ -0.39
FN1-207ENST00000421182 CCNL1Q9UK58 526 aaPredicted RBP12.63□□□□□ -0.39
FN1-207ENST00000421182 ABCA8O94911 1581 aa12.63□□□□□ -0.39
FN1-207ENST00000421182 SHTN1A0MZ66 631 aa12.63□□□□□ -0.39
FN1-207ENST00000421182 KRT2P35908 639 aa12.63□□□□□ -0.39
FN1-207ENST00000421182 HDAC1Q13547 482 aaPredicted RBP12.63□□□□□ -0.39
FN1-207ENST00000421182 SLC9C2Q5TAH2 1124 aa12.63□□□□□ -0.39
FN1-207ENST00000421182 CCDC102AQ96A19 550 aa12.63□□□□□ -0.39
FN1-207ENST00000421182 GCP02774 474 aa12.63□□□□□ -0.39
FN1-207ENST00000421182 CAMK4Q16566 473 aa12.63□□□□□ -0.39
FN1-207ENST00000421182 RHPN1Q8TCX5 695 aa12.63□□□□□ -0.39
FN1-207ENST00000421182 LMBR1Q8WVP7 490 aa12.63□□□□□ -0.39
FN1-207ENST00000421182 MCM9Q9NXL9 1143 aa12.63□□□□□ -0.39
FN1-207ENST00000421182 FAM13AO94988 1023 aa12.63□□□□□ -0.39
FN1-207ENST00000421182 KIAA1524Q8TCG1 905 aa12.63□□□□□ -0.39
FN1-207ENST00000421182 CDC42BPBQ9Y5S2 1711 aa12.63□□□□□ -0.39
FN1-207ENST00000421182 CCDC171Q6TFL3 1326 aa12.63□□□□□ -0.39
FN1-207ENST00000421182 GJB2P29033 226 aa12.63□□□□□ -0.39
FN1-207ENST00000421182 TCHPQ9BT92 498 aa12.63□□□□□ -0.39
FN1-207ENST00000421182 TCOF1Q13428 1488 aaKnown RBP12.63□□□□□ -0.39
FN1-207ENST00000421182 MICALCLQ6ZW33 695 aa12.62□□□□□ -0.39
FN1-207ENST00000421182 FAM107BQ9H098 131 aa12.62□□□□□ -0.39
FN1-207ENST00000421182 ATP2A1O14983 1001 aa12.62□□□□□ -0.39
FN1-207ENST00000421182 SMTNP53814 917 aa12.62□□□□□ -0.39
FN1-207ENST00000421182 FAM193AP78312 1265 aa12.62□□□□□ -0.39
FN1-207ENST00000421182 TCIRG1Q13488 830 aa12.62□□□□□ -0.39
FN1-207ENST00000421182 CCDC144CPQ8IYA2 1237 aa12.62□□□□□ -0.39
FN1-207ENST00000421182 HACE1Q8IYU2 909 aa12.62□□□□□ -0.39
FN1-207ENST00000421182 ALG1Q9BT22 464 aa12.62□□□□□ -0.39
FN1-207ENST00000421182 F8W031 263 aaPredicted RBP12.62□□□□□ -0.39
FN1-207ENST00000421182 CKAP4Q07065 602 aaKnown RBP12.62□□□□□ -0.39
FN1-207ENST00000421182 RBM26Q5T8P6 1007 aaKnown RBP12.62□□□□□ -0.39
FN1-207ENST00000421182 SLAIN2Q9P270 581 aa12.62□□□□□ -0.39
FN1-207ENST00000421182 DISP3Q9P2K9 1392 aa12.62□□□□□ -0.39
FN1-207ENST00000421182 CROCC2H7BZ55 1655 aa12.62□□□□□ -0.39
FN1-207ENST00000421182 CYLC1P35663 651 aaPredicted RBP12.62□□□□□ -0.39
FN1-207ENST00000421182 TNFAIP1Q13829 316 aa12.62□□□□□ -0.39
FN1-207ENST00000421182 KIAA0753Q2KHM9 967 aa12.62□□□□□ -0.39
FN1-207ENST00000421182 PNMA2Q9UL42 364 aa12.62□□□□□ -0.39
FN1-207ENST00000421182 SBNO1A3KN83 1393 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms