RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 RILPL2Q969X0 211 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 ZSCAN31Q96LW9 406 aaPredicted RBP7.16□□□□□ -1.26
CHD2-202ENST00000420239 TNMDQ9H2S6 317 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 CLSTN2Q9H4D0 955 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 PRM3Q9NNZ6 103 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 HMX1Q9NP08 348 aaPredicted RBP7.16□□□□□ -1.26
CHD2-202ENST00000420239 SLC52A1Q9NWF4 448 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 CABP1Q9NZU7 370 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 PNMA3Q9UL41 463 aa7.16□□□□□ -1.26
CHD2-202ENST00000420239 C3P01024 1663 aa7.15□□□□□ -1.26
CHD2-202ENST00000420239 LOC102724159A0A0B4J2E5 919 aa7.15□□□□□ -1.26
CHD2-202ENST00000420239 CCDC69A6NI79 296 aa7.15□□□□□ -1.26
CHD2-202ENST00000420239 SGSM2O43147 1006 aa7.15□□□□□ -1.26
CHD2-202ENST00000420239 NEMFO60524 1076 aa7.15□□□□□ -1.26
CHD2-202ENST00000420239 SEC31AO94979 1220 aaKnown RBP7.15□□□□□ -1.26
CHD2-202ENST00000420239 CAVIN2O95810 425 aa7.15□□□□□ -1.26
CHD2-202ENST00000420239 CPA1P15085 419 aa7.15□□□□□ -1.26
CHD2-202ENST00000420239 PWP2Q15269 919 aaKnown RBP7.15□□□□□ -1.26
CHD2-202ENST00000420239 TMCO4Q5TGY1 634 aa7.15□□□□□ -1.26
CHD2-202ENST00000420239 SARM1Q6SZW1 724 aa7.15□□□□□ -1.26
CHD2-202ENST00000420239 CCDC83Q8IWF9 413 aa7.15□□□□□ -1.26
CHD2-202ENST00000420239 TATDN2Q93075 761 aa7.15□□□□□ -1.26
CHD2-202ENST00000420239 PRAM1Q96QH2 718 aa7.15□□□□□ -1.26
CHD2-202ENST00000420239 TM6SF1Q9BZW5 370 aa7.15□□□□□ -1.26
CHD2-202ENST00000420239 LSG1Q9H089 658 aaKnown RBP7.15□□□□□ -1.26
CHD2-202ENST00000420239 DACT1Q9NYF0 836 aa7.15□□□□□ -1.26
CHD2-202ENST00000420239 LHX6Q9UPM6 363 aa7.15□□□□□ -1.26
CHD2-202ENST00000420239 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.15□□□□□ -1.27
CHD2-202ENST00000420239 VPS37CA5D8V6 355 aaPredicted RBP7.15□□□□□ -1.27
CHD2-202ENST00000420239 FAM83GA6ND36 823 aa7.15□□□□□ -1.27
CHD2-202ENST00000420239 NBPF26B4DH59 902 aa7.15□□□□□ -1.27
CHD2-202ENST00000420239 PPP1R3GB7ZBB8 358 aa7.15□□□□□ -1.27
CHD2-202ENST00000420239 SMAPO00193 183 aa7.15□□□□□ -1.27
CHD2-202ENST00000420239 SASH3O75995 380 aa7.15□□□□□ -1.27
CHD2-202ENST00000420239 ZNF165P49910 485 aa7.15□□□□□ -1.27
CHD2-202ENST00000420239 GTF2A1P52655 376 aaPredicted RBP7.15□□□□□ -1.27
CHD2-202ENST00000420239 IQCB1Q15051 598 aa7.15□□□□□ -1.27
CHD2-202ENST00000420239 ZSCAN26Q16670 478 aa7.15□□□□□ -1.27
CHD2-202ENST00000420239 ARHGAP29Q52LW3 1261 aa7.15□□□□□ -1.27
CHD2-202ENST00000420239 ICE2Q659A1 982 aa7.15□□□□□ -1.27
CHD2-202ENST00000420239 FAM173BQ6P4H8 233 aa7.15□□□□□ -1.27
CHD2-202ENST00000420239 C11orf57Q6ZUT1 292 aaPredicted RBP7.15□□□□□ -1.27
CHD2-202ENST00000420239 RDH13Q8NBN7 331 aa7.15□□□□□ -1.27
CHD2-202ENST00000420239 SH2B1Q9NRF2 756 aaPredicted RBP7.15□□□□□ -1.27
CHD2-202ENST00000420239 ORC3Q9UBD5 711 aaPredicted RBP7.15□□□□□ -1.27
CHD2-202ENST00000420239 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.15□□□□□ -1.271e-8■■■■□ 19.7
CHD2-202ENST00000420239 USP16Q9Y5T5 823 aa7.15□□□□□ -1.27
CHD2-202ENST00000420239 EMILIN1Q9Y6C2 1016 aa7.15□□□□□ -1.27
CHD2-202ENST00000420239 FAM208AQ9UK61 1670 aaKnown RBP7.14□□□□□ -1.27
CHD2-202ENST00000420239 PXDNLA1KZ92 1463 aa7.14□□□□□ -1.27
CHD2-202ENST00000420239 GNAI3P08754 354 aa7.14□□□□□ -1.27
CHD2-202ENST00000420239 OAS2P29728 719 aaKnown RBP7.14□□□□□ -1.27
CHD2-202ENST00000420239 TPM4P67936 248 aa7.14□□□□□ -1.27
CHD2-202ENST00000420239 TEX35Q5T0J7 233 aa7.14□□□□□ -1.27
CHD2-202ENST00000420239 HDGFL1Q5TGJ6 251 aa7.14□□□□□ -1.27
CHD2-202ENST00000420239 PRPF38BQ5VTL8 546 aaKnown RBP7.14□□□□□ -1.27
CHD2-202ENST00000420239 SRLQ86TD4 932 aa7.14□□□□□ -1.27
CHD2-202ENST00000420239 REXO1L1PQ8IX06 675 aa7.14□□□□□ -1.27
CHD2-202ENST00000420239 PBXIP1Q96AQ6 731 aa7.14□□□□□ -1.27
CHD2-202ENST00000420239 SYTL4Q96C24 671 aaPredicted RBP7.14□□□□□ -1.27
CHD2-202ENST00000420239 MRFAP1L1Q96HT8 127 aa7.14□□□□□ -1.27
CHD2-202ENST00000420239 ZCCHC17Q9NP64 241 aaKnown RBP7.14□□□□□ -1.27
CHD2-202ENST00000420239 DDX19AQ9NUU7 478 aaKnown RBP7.14□□□□□ -1.27
CHD2-202ENST00000420239 NDUFB9Q9Y6M9 179 aa7.14□□□□□ -1.27
CHD2-202ENST00000420239 RIMBP3CA6NJZ7 1639 aa7.14□□□□□ -1.27
CHD2-202ENST00000420239 RIMBP3BA6NNM3 1639 aa7.14□□□□□ -1.27
CHD2-202ENST00000420239 RIMBP3Q9UFD9 1639 aa7.14□□□□□ -1.27
CHD2-202ENST00000420239 SPATA31D1Q6ZQQ2 1576 aa7.14□□□□□ -1.27
CHD2-202ENST00000420239 PLEKHG2Q9H7P9 1386 aa7.14□□□□□ -1.27
CHD2-202ENST00000420239 USP42Q9H9J4 1324 aaKnown RBP7.14□□□□□ -1.27
CHD2-202ENST00000420239 HOXA2O43364 376 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 HTATSF1O43719 755 aaKnown RBP7.13□□□□□ -1.27
CHD2-202ENST00000420239 RAB11FIP3O75154 756 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 RFX1P22670 979 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 FBLN1P23142 703 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 SNW1Q13573 536 aaKnown RBP7.13□□□□□ -1.27
CHD2-202ENST00000420239 SAFB2Q14151 953 aaKnown RBP eCLIP7.13□□□□□ -1.27
CHD2-202ENST00000420239 VPS53Q5VIR6 699 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 E4F1Q66K89 784 aaPredicted RBP7.13□□□□□ -1.27
CHD2-202ENST00000420239 CDC37L1Q7L3B6 337 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 HLA-CQ95604 372 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 PPP1R13BQ96KQ4 1090 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 HYPKQ9NX55 129 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 RRP15Q9Y3B9 282 aaKnown RBP7.13□□□□□ -1.27
CHD2-202ENST00000420239 NR1I2O75469 434 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 TBC1D8O95759 1140 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 GUCA2AQ02747 115 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 DCTN1Q14203 1278 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 DOK7Q18PE1 504 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 CTR9Q6PD62 1173 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 FERMT3Q86UX7 667 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 FBXO18Q8NFZ0 1043 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 ZBTB3Q9H5J0 574 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 PCDHGC3Q9UN70 934 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 MTMR7Q9Y216 660 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 LRRC37A3O60309 1634 aa7.13□□□□□ -1.27
CHD2-202ENST00000420239 SOS1Q07889 1333 aaPredicted RBP7.12□□□□□ -1.27
CHD2-202ENST00000420239 KIF2AO00139 706 aaPredicted RBP7.12□□□□□ -1.27
CHD2-202ENST00000420239 GUCY2CP25092 1073 aa7.12□□□□□ -1.27
CHD2-202ENST00000420239 KRT85P78386 507 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms