RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 GPBP1L1Q9HC44 474 aaPredicted RBP25.62■■□□□ 1.69
HMGXB4-203ENST00000420166 CEP126Q9P2H0 1117 aa25.62■■□□□ 1.69
HMGXB4-203ENST00000420166 CXCL9Q07325 125 aa25.61■■□□□ 1.69
HMGXB4-203ENST00000420166 PUM3Q15397 648 aaKnown RBP25.6■■□□□ 1.69
HMGXB4-203ENST00000420166 GPC2Q8N158 579 aa25.6■■□□□ 1.69
HMGXB4-203ENST00000420166 COA1Q9GZY4 146 aa25.6■■□□□ 1.69
HMGXB4-203ENST00000420166 RAD17O75943 681 aa25.59■■□□□ 1.69
HMGXB4-203ENST00000420166 FGFR2P21802 821 aa25.59■■□□□ 1.69
HMGXB4-203ENST00000420166 G3BP1Q13283 466 aaKnown RBP eCLIP25.59■■□□□ 1.69
HMGXB4-203ENST00000420166 CIAPIN1Q6FI81 312 aa25.59■■□□□ 1.69
HMGXB4-203ENST00000420166 PODNQ7Z5L7 613 aa25.58■■□□□ 1.69
HMGXB4-203ENST00000420166 SIRT2Q8IXJ6 389 aa25.58■■□□□ 1.69
HMGXB4-203ENST00000420166 L3MBTL3Q96JM7 780 aaPredicted RBP25.58■■□□□ 1.69
HMGXB4-203ENST00000420166 NMRK2Q9NPI5 230 aa25.58■■□□□ 1.69
HMGXB4-203ENST00000420166 NOP58Q9Y2X3 529 aaKnown RBP25.58■■□□□ 1.69
HMGXB4-203ENST00000420166 GJA3Q9Y6H8 435 aa25.58■■□□□ 1.69
HMGXB4-203ENST00000420166 SURF6O75683 361 aaKnown RBP25.57■■□□□ 1.68
HMGXB4-203ENST00000420166 TNIP1Q15025 636 aa25.57■■□□□ 1.68
HMGXB4-203ENST00000420166 ZNF804AQ7Z570 1209 aa25.57■■□□□ 1.68
HMGXB4-203ENST00000420166 KCNQ5Q9NR82 932 aa25.57■■□□□ 1.68
HMGXB4-203ENST00000420166 SCN4AP35499 1836 aa25.56■■□□□ 1.68
HMGXB4-203ENST00000420166 HMMRO75330 724 aa25.56■■□□□ 1.68
HMGXB4-203ENST00000420166 ATP2B3Q16720 1220 aa25.56■■□□□ 1.68
HMGXB4-203ENST00000420166 ARAP2Q8WZ64 1704 aa25.56■■□□□ 1.68
HMGXB4-203ENST00000420166 ZNF646O15015 1829 aaPredicted RBP25.56■■□□□ 1.68
HMGXB4-203ENST00000420166 PSMD14O00487 310 aa25.55■■□□□ 1.68
HMGXB4-203ENST00000420166 IFIT1P09914 478 aaKnown RBP25.55■■□□□ 1.68
HMGXB4-203ENST00000420166 SLC5A1P13866 664 aa25.55■■□□□ 1.68
HMGXB4-203ENST00000420166 TFCP2Q12800 502 aa25.55■■□□□ 1.68
HMGXB4-203ENST00000420166 LPIN2Q92539 896 aa25.55■■□□□ 1.68
HMGXB4-203ENST00000420166 CD209Q9NNX6 404 aa25.55■■□□□ 1.68
HMGXB4-203ENST00000420166 GYG1P46976 350 aa25.54■■□□□ 1.68
HMGXB4-203ENST00000420166 OS9Q13438 667 aaPredicted RBP25.54■■□□□ 1.68
HMGXB4-203ENST00000420166 FAM84BQ96KN1 310 aaPredicted RBP25.54■■□□□ 1.68
HMGXB4-203ENST00000420166 RRAGCQ9HB90 399 aa25.54■■□□□ 1.68
HMGXB4-203ENST00000420166 POTECB2RU33 542 aa25.53■■□□□ 1.68
HMGXB4-203ENST00000420166 SASH1O94885 1247 aa25.53■■□□□ 1.68
HMGXB4-203ENST00000420166 IL1R1P14778 569 aa25.52■■□□□ 1.68
HMGXB4-203ENST00000420166 VEGFAP15692 232 aaPredicted RBP25.52■■□□□ 1.68
HMGXB4-203ENST00000420166 HIBADHP31937 336 aaKnown RBP25.52■■□□□ 1.68
HMGXB4-203ENST00000420166 CAVIN4Q5BKX8 364 aa25.52■■□□□ 1.68
HMGXB4-203ENST00000420166 FBXO33Q7Z6M2 555 aa25.52■■□□□ 1.68
HMGXB4-203ENST00000420166 EXOC6BQ9Y2D4 811 aa25.52■■□□□ 1.68
HMGXB4-203ENST00000420166 AKAP2Q9Y2D5 859 aa25.52■■□□□ 1.68
HMGXB4-203ENST00000420166 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.52■■□□□ 1.68
HMGXB4-203ENST00000420166 USP17L3A6NCW0 530 aa25.51■■□□□ 1.67
HMGXB4-203ENST00000420166 USP17L4A6NCW7 530 aa25.51■■□□□ 1.67
HMGXB4-203ENST00000420166 VIL1P09327 827 aaKnown RBP25.51■■□□□ 1.67
HMGXB4-203ENST00000420166 GMPSP49915 693 aaPredicted RBP25.51■■□□□ 1.67
HMGXB4-203ENST00000420166 USP17L1Q7RTZ2 530 aa25.51■■□□□ 1.67
HMGXB4-203ENST00000420166 ZNF609O15014 1411 aa25.51■■□□□ 1.67
HMGXB4-203ENST00000420166 IQCA1LA6NCM1 817 aa25.5■■□□□ 1.67
HMGXB4-203ENST00000420166 KIF3CO14782 793 aa25.5■■□□□ 1.67
HMGXB4-203ENST00000420166 SCNN1DP51172 638 aa25.5■■□□□ 1.67
HMGXB4-203ENST00000420166 HSP90AB4PQ58FF6 505 aa25.5■■□□□ 1.67
HMGXB4-203ENST00000420166 VPS37DQ86XT2 251 aa25.5■■□□□ 1.67
HMGXB4-203ENST00000420166 MYH13Q9UKX3 1938 aa25.49■■□□□ 1.67
HMGXB4-203ENST00000420166 A0A1B0GUL7 405 aa25.49■■□□□ 1.67
HMGXB4-203ENST00000420166 TDRD7Q8NHU6 1098 aaKnown RBP25.49■■□□□ 1.67
HMGXB4-203ENST00000420166 ZBTB12Q9Y330 459 aaPredicted RBP25.49■■□□□ 1.67
HMGXB4-203ENST00000420166 PCDHB15Q9Y5E8 787 aa25.49■■□□□ 1.67
HMGXB4-203ENST00000420166 RPS12P25398 132 aaKnown RBP25.48■■□□□ 1.67
HMGXB4-203ENST00000420166 LMOD1P29536 600 aaPredicted RBP25.48■■□□□ 1.67
HMGXB4-203ENST00000420166 BCAMP50895 628 aa25.48■■□□□ 1.67
HMGXB4-203ENST00000420166 TIMM10P62072 90 aa25.48■■□□□ 1.67
HMGXB4-203ENST00000420166 AAMPQ13685 434 aa25.48■■□□□ 1.67
HMGXB4-203ENST00000420166 DACT2Q5SW24 774 aa25.48■■□□□ 1.67
HMGXB4-203ENST00000420166 STRIP1Q5VSL9 837 aa25.48■■□□□ 1.67
HMGXB4-203ENST00000420166 ERC1Q8IUD2 1116 aa25.48■■□□□ 1.67
HMGXB4-203ENST00000420166 EXOC6Q8TAG9 804 aa25.48■■□□□ 1.67
HMGXB4-203ENST00000420166 FBXW7Q969H0 707 aa25.48■■□□□ 1.67
HMGXB4-203ENST00000420166 GPR108Q9NPR9 543 aa25.48■■□□□ 1.67
HMGXB4-203ENST00000420166 GPRC5DQ9NZD1 345 aa25.48■■□□□ 1.67
HMGXB4-203ENST00000420166 HACL1Q9UJ83 578 aa25.48■■□□□ 1.67
HMGXB4-203ENST00000420166 ADORA1P30542 326 aa25.47■■□□□ 1.67
HMGXB4-203ENST00000420166 GTF2IP78347 998 aa25.47■■□□□ 1.67
HMGXB4-203ENST00000420166 TTLL5Q6EMB2 1281 aa25.47■■□□□ 1.67
HMGXB4-203ENST00000420166 RSBN1LQ6PCB5 846 aaPredicted RBP25.47■■□□□ 1.67
HMGXB4-203ENST00000420166 DPF2Q92785 391 aa25.47■■□□□ 1.67
HMGXB4-203ENST00000420166 EPS15P42566 896 aa25.46■■□□□ 1.67
HMGXB4-203ENST00000420166 TAF1DQ9H5J8 278 aaPredicted RBP25.46■■□□□ 1.67
HMGXB4-203ENST00000420166 TNNI3KQ59H18 835 aa25.45■■□□□ 1.66
HMGXB4-203ENST00000420166 AGBL3Q8NEM8 1001 aa25.45■■□□□ 1.66
HMGXB4-203ENST00000420166 GMLQ99445 158 aa25.45■■□□□ 1.66
HMGXB4-203ENST00000420166 IQSEC3Q9UPP2 1182 aaPredicted RBP25.45■■□□□ 1.66
HMGXB4-203ENST00000420166 FPGT-TNNI3KV9GXZ4 949 aa25.45■■□□□ 1.66
HMGXB4-203ENST00000420166 FAM205AQ6ZU69 1335 aa25.44■■□□□ 1.66
HMGXB4-203ENST00000420166 EPHX2P34913 555 aa25.44■■□□□ 1.66
HMGXB4-203ENST00000420166 IRX6P78412 446 aaPredicted RBP25.44■■□□□ 1.66
HMGXB4-203ENST00000420166 XAGE2Q96GT9 111 aa25.44■■□□□ 1.66
HMGXB4-203ENST00000420166 NEUROD6Q96NK8 337 aa25.44■■□□□ 1.66
HMGXB4-203ENST00000420166 MXD3Q9BW11 206 aa25.44■■□□□ 1.66
HMGXB4-203ENST00000420166 MYO3BQ8WXR4 1341 aa25.43■■□□□ 1.66
HMGXB4-203ENST00000420166 RAB11FIP3O75154 756 aa25.43■■□□□ 1.66
HMGXB4-203ENST00000420166 PHKA1P46020 1223 aa25.43■■□□□ 1.66
HMGXB4-203ENST00000420166 MICALL2Q8IY33 904 aa25.43■■□□□ 1.66
HMGXB4-203ENST00000420166 C16orf71Q8IYS4 520 aaPredicted RBP25.43■■□□□ 1.66
HMGXB4-203ENST00000420166 RHPN1Q8TCX5 695 aa25.43■■□□□ 1.66
HMGXB4-203ENST00000420166 CNOT7Q9UIV1 285 aaKnown RBP25.43■■□□□ 1.66
HMGXB4-203ENST00000420166 APBB1O00213 710 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms