RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 WDR33Q9C0J8 1336 aaKnown RBP8.44□□□□□ -1.06
TVP23C-202ENST00000419890 ALS2Q96Q42 1657 aa8.43□□□□□ -1.06
TVP23C-202ENST00000419890 MARF1Q9Y4F3 1742 aaKnown RBP8.43□□□□□ -1.06
TVP23C-202ENST00000419890 SYCE3A1L190 88 aa8.43□□□□□ -1.06
TVP23C-202ENST00000419890 ZBTB7CA1YPR0 619 aa8.43□□□□□ -1.06
TVP23C-202ENST00000419890 IRF6O14896 467 aa8.43□□□□□ -1.06
TVP23C-202ENST00000419890 CCT4P50991 539 aaKnown RBP8.43□□□□□ -1.06
TVP23C-202ENST00000419890 SYCP1Q15431 976 aa8.43□□□□□ -1.06
TVP23C-202ENST00000419890 TSPYL6Q8N831 410 aa8.43□□□□□ -1.06
TVP23C-202ENST00000419890 TMX3Q96JJ7 454 aa8.43□□□□□ -1.06
TVP23C-202ENST00000419890 C1orf115Q9H7X2 142 aa8.43□□□□□ -1.06
TVP23C-202ENST00000419890 PRDM11Q9NQV5 511 aa8.43□□□□□ -1.06
TVP23C-202ENST00000419890 FAM13BQ9NYF5 915 aa8.43□□□□□ -1.06
TVP23C-202ENST00000419890 FAM181BA6NEQ2 426 aa8.42□□□□□ -1.06
TVP23C-202ENST00000419890 CHL1O00533 1208 aa8.42□□□□□ -1.06
TVP23C-202ENST00000419890 SH3BP2P78314 561 aa8.42□□□□□ -1.06
TVP23C-202ENST00000419890 FKBP5Q13451 457 aaPredicted RBP8.42□□□□□ -1.06
TVP23C-202ENST00000419890 CHRNA2Q15822 529 aa8.42□□□□□ -1.06
TVP23C-202ENST00000419890 CCDC183Q5T5S1 534 aa8.42□□□□□ -1.06
TVP23C-202ENST00000419890 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.42□□□□□ -1.066e-8■■■■□ 26.3
TVP23C-202ENST00000419890 ZGPATQ8N5A5 531 aaKnown RBP8.42□□□□□ -1.06
TVP23C-202ENST00000419890 EHBP1Q8NDI1 1231 aa8.42□□□□□ -1.06
TVP23C-202ENST00000419890 GJD4Q96KN9 370 aaPredicted RBP8.42□□□□□ -1.06
TVP23C-202ENST00000419890 NUDT12Q9BQG2 462 aa8.42□□□□□ -1.06
TVP23C-202ENST00000419890 GTPBP4Q9BZE4 634 aaKnown RBP8.42□□□□□ -1.06
TVP23C-202ENST00000419890 BTG4Q9NY30 223 aa8.42□□□□□ -1.06
TVP23C-202ENST00000419890 STAP2Q9UGK3 403 aa8.42□□□□□ -1.06
TVP23C-202ENST00000419890 USP25Q9UHP3 1055 aa8.42□□□□□ -1.06
TVP23C-202ENST00000419890 ATP6V1DQ9Y5K8 247 aa8.42□□□□□ -1.06
TVP23C-202ENST00000419890 TTC21BQ7Z4L5 1316 aa8.42□□□□□ -1.06
TVP23C-202ENST00000419890 RPAP1Q9BWH6 1393 aaPredicted RBP8.42□□□□□ -1.06
TVP23C-202ENST00000419890 USP6P35125 1406 aa8.42□□□□□ -1.06
TVP23C-202ENST00000419890 BCL9LQ86UU0 1499 aa8.42□□□□□ -1.06
TVP23C-202ENST00000419890 USP54Q70EL1 1684 aa8.41□□□□□ -1.06
TVP23C-202ENST00000419890 KIF20AO95235 890 aa8.41□□□□□ -1.06
TVP23C-202ENST00000419890 GCP02774 474 aa8.41□□□□□ -1.06
TVP23C-202ENST00000419890 PTMAP06454 111 aaKnown RBP8.41□□□□□ -1.06
TVP23C-202ENST00000419890 PDE1AP54750 535 aa8.41□□□□□ -1.06
TVP23C-202ENST00000419890 EVA1CP58658 441 aa8.41□□□□□ -1.06
TVP23C-202ENST00000419890 DMTNQ08495 405 aa8.41□□□□□ -1.06
TVP23C-202ENST00000419890 PKP1Q13835 747 aa8.41□□□□□ -1.06
TVP23C-202ENST00000419890 RETREG3Q86VR2 466 aa8.41□□□□□ -1.06
TVP23C-202ENST00000419890 C8orf58Q8NAV2 365 aa8.41□□□□□ -1.06
TVP23C-202ENST00000419890 ESYT1Q9BSJ8 1104 aa8.41□□□□□ -1.06
TVP23C-202ENST00000419890 DIAPH3Q9NSV4 1193 aa8.41□□□□□ -1.06
TVP23C-202ENST00000419890 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.41□□□□□ -1.06
TVP23C-202ENST00000419890 SLIT2O94813 1529 aa8.4□□□□□ -1.06
TVP23C-202ENST00000419890 OVOS2A0A0J9YW53 1432 aa8.4□□□□□ -1.06
TVP23C-202ENST00000419890 ATRNO75882 1429 aa8.4□□□□□ -1.06
TVP23C-202ENST00000419890 CRB1P82279 1406 aa8.4□□□□□ -1.06
TVP23C-202ENST00000419890 OVOS2Q6IE36 1432 aa8.4□□□□□ -1.06
TVP23C-202ENST00000419890 CCDC171Q6TFL3 1326 aa8.4□□□□□ -1.06
TVP23C-202ENST00000419890 TTC21AQ8NDW8 1320 aa8.4□□□□□ -1.06
TVP23C-202ENST00000419890 VPS72Q15906 364 aa8.4□□□□□ -1.06
TVP23C-202ENST00000419890 PHACTR3Q96KR7 559 aa8.4□□□□□ -1.06
TVP23C-202ENST00000419890 WASF2Q9Y6W5 498 aa8.4□□□□□ -1.06
TVP23C-202ENST00000419890 ABCA3Q99758 1704 aa8.4□□□□□ -1.07
TVP23C-202ENST00000419890 GOLGA6L6A8MZA4 724 aa8.39□□□□□ -1.07
TVP23C-202ENST00000419890 GNAI3P08754 354 aa8.39□□□□□ -1.07
TVP23C-202ENST00000419890 MX1P20591 662 aa8.39□□□□□ -1.07
TVP23C-202ENST00000419890 NEK4P51957 841 aa8.39□□□□□ -1.07
TVP23C-202ENST00000419890 UBE2HP62256 183 aa8.39□□□□□ -1.07
TVP23C-202ENST00000419890 ZFP42Q96MM3 310 aa8.39□□□□□ -1.07
TVP23C-202ENST00000419890 STRN4Q9NRL3 753 aa8.39□□□□□ -1.07
TVP23C-202ENST00000419890 FAM217BQ9NTX9 383 aaPredicted RBP8.39□□□□□ -1.07
TVP23C-202ENST00000419890 PCDHGC3Q9UN70 934 aa8.39□□□□□ -1.07
TVP23C-202ENST00000419890 GNAI2P04899 355 aa8.38□□□□□ -1.07
TVP23C-202ENST00000419890 RBM10P98175 930 aaKnown RBP8.38□□□□□ -1.07
TVP23C-202ENST00000419890 CHAF1AQ13111 956 aaPredicted RBP8.38□□□□□ -1.07
TVP23C-202ENST00000419890 NOLC1Q14978 699 aaKnown RBP eCLIP8.38□□□□□ -1.07
TVP23C-202ENST00000419890 TAF3Q5VWG9 929 aa8.38□□□□□ -1.07
TVP23C-202ENST00000419890 NME9Q86XW9 330 aa8.38□□□□□ -1.07
TVP23C-202ENST00000419890 AEBP1Q8IUX7 1158 aa8.38□□□□□ -1.07
TVP23C-202ENST00000419890 KCNH5Q8NCM2 988 aa8.38□□□□□ -1.07
TVP23C-202ENST00000419890 COG3Q96JB2 828 aa8.38□□□□□ -1.07
TVP23C-202ENST00000419890 BABAM1Q9NWV8 329 aa8.38□□□□□ -1.07
TVP23C-202ENST00000419890 KIF3AQ9Y496 699 aa8.38□□□□□ -1.07
TVP23C-202ENST00000419890 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.38□□□□□ -1.07
TVP23C-202ENST00000419890 COL14A1Q05707 1796 aaKnown RBP8.38□□□□□ -1.07
TVP23C-202ENST00000419890 KDRP35968 1356 aa8.37□□□□□ -1.07
TVP23C-202ENST00000419890 USP31Q70CQ4 1352 aa8.37□□□□□ -1.07
TVP23C-202ENST00000419890 PLCH1Q4KWH8 1693 aa8.37□□□□□ -1.07
TVP23C-202ENST00000419890 RAD50Q92878 1312 aa8.37□□□□□ -1.07
TVP23C-202ENST00000419890 HTATSF1O43719 755 aaKnown RBP8.37□□□□□ -1.07
TVP23C-202ENST00000419890 CHMLP26374 656 aa8.37□□□□□ -1.07
TVP23C-202ENST00000419890 HSPA4P34932 840 aa8.37□□□□□ -1.07
TVP23C-202ENST00000419890 FAM193AP78312 1265 aa8.37□□□□□ -1.07
TVP23C-202ENST00000419890 FEZ1Q99689 392 aa8.37□□□□□ -1.07
TVP23C-202ENST00000419890 FUCA2Q9BTY2 467 aa8.37□□□□□ -1.07
TVP23C-202ENST00000419890 LRRCC1Q9C099 1032 aa8.37□□□□□ -1.07
TVP23C-202ENST00000419890 TLL2Q9Y6L7 1015 aa8.37□□□□□ -1.07
TVP23C-202ENST00000419890 PEAK1Q9H792 1746 aa8.37□□□□□ -1.07
TVP23C-202ENST00000419890 TCHHQ07283 1943 aa8.37□□□□□ -1.07
TVP23C-202ENST00000419890 PHRF1Q9P1Y6 1649 aaKnown RBP8.36□□□□□ -1.07
TVP23C-202ENST00000419890 CTIFO43310 598 aaKnown RBP8.36□□□□□ -1.07
TVP23C-202ENST00000419890 RAB11FIP3O75154 756 aa8.36□□□□□ -1.07
TVP23C-202ENST00000419890 HMOX1P09601 288 aa8.36□□□□□ -1.07
TVP23C-202ENST00000419890 CCNYL3P0C7X3 344 aa8.36□□□□□ -1.07
TVP23C-202ENST00000419890 CREBRFQ8IUR6 639 aa8.36□□□□□ -1.07
TVP23C-202ENST00000419890 SEPT12Q8IYM1 358 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms