RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 KAZALD1Q96I82 304 aa12.13□□□□□ -0.47
CTSA-205ENST00000419493 TRAF5O00463 557 aa12.12□□□□□ -0.47
CTSA-205ENST00000419493 KLRK1P26718 216 aa12.12□□□□□ -0.47
CTSA-205ENST00000419493 BRPF1P55201 1214 aaPredicted RBP12.12□□□□□ -0.47
CTSA-205ENST00000419493 FMR1Q06787 632 aaKnown RBP eCLIP12.12□□□□□ -0.47
CTSA-205ENST00000419493 KIF4BQ2VIQ3 1234 aa12.12□□□□□ -0.47
CTSA-205ENST00000419493 TTLL5Q6EMB2 1281 aa12.12□□□□□ -0.47
CTSA-205ENST00000419493 ZC3H15Q8WU90 426 aaKnown RBP12.12□□□□□ -0.47
CTSA-205ENST00000419493 DCPSQ96C86 337 aaKnown RBP12.12□□□□□ -0.47
CTSA-205ENST00000419493 GLIS2Q9BZE0 524 aaPredicted RBP12.12□□□□□ -0.47
CTSA-205ENST00000419493 PUS3Q9BZE2 481 aaKnown RBP12.12□□□□□ -0.47
CTSA-205ENST00000419493 ABT1Q9ULW3 272 aaKnown RBP12.12□□□□□ -0.47
CTSA-205ENST00000419493 HDAC5Q9UQL6 1122 aa12.12□□□□□ -0.47
CTSA-205ENST00000419493 BCAR3O75815 825 aa12.11□□□□□ -0.47
CTSA-205ENST00000419493 USP17L8P0C7I0 530 aa12.11□□□□□ -0.47
CTSA-205ENST00000419493 GTF2IP78347 998 aa12.11□□□□□ -0.47
CTSA-205ENST00000419493 RABL6Q3YEC7 729 aaPredicted RBP12.11□□□□□ -0.47
CTSA-205ENST00000419493 PAXIP1Q6ZW49 1069 aaPredicted RBP12.11□□□□□ -0.47
CTSA-205ENST00000419493 CDC37L1Q7L3B6 337 aa12.11□□□□□ -0.47
CTSA-205ENST00000419493 ZNF804AQ7Z570 1209 aa12.11□□□□□ -0.47
CTSA-205ENST00000419493 OGFOD1Q8N543 542 aa12.11□□□□□ -0.47
CTSA-205ENST00000419493 ARHGAP45Q92619 1136 aa12.11□□□□□ -0.47
CTSA-205ENST00000419493 MXD3Q9BW11 206 aa12.11□□□□□ -0.47
CTSA-205ENST00000419493 ZNF408Q9H9D4 720 aa12.11□□□□□ -0.47
CTSA-205ENST00000419493 CD209Q9NNX6 404 aa12.11□□□□□ -0.47
CTSA-205ENST00000419493 ADAMTSL1Q8N6G6 1762 aa12.1□□□□□ -0.47
CTSA-205ENST00000419493 EGFRP00533 1210 aa12.1□□□□□ -0.47
CTSA-205ENST00000419493 METTL24Q5JXM2 366 aa12.1□□□□□ -0.47
CTSA-205ENST00000419493 STRIP1Q5VSL9 837 aa12.1□□□□□ -0.47
CTSA-205ENST00000419493 USP48Q86UV5 1035 aa12.1□□□□□ -0.47
CTSA-205ENST00000419493 ANKRD44Q8N8A2 993 aa12.1□□□□□ -0.47
CTSA-205ENST00000419493 KLHDC4Q8TBB5 520 aa12.1□□□□□ -0.47
CTSA-205ENST00000419493 CLUAP1Q96AJ1 413 aa12.1□□□□□ -0.47
CTSA-205ENST00000419493 PGAP2Q9UHJ9 254 aa12.1□□□□□ -0.47
CTSA-205ENST00000419493 SCN9AQ15858 1988 aa12.1□□□□□ -0.47
CTSA-205ENST00000419493 MROH5Q6ZUA9 1318 aa12.1□□□□□ -0.47
CTSA-205ENST00000419493 CELF2O95319 508 aaKnown RBP12.09□□□□□ -0.47
CTSA-205ENST00000419493 GRM1Q13255 1194 aa12.09□□□□□ -0.47
CTSA-205ENST00000419493 UBE4AQ14139 1066 aa12.09□□□□□ -0.47
CTSA-205ENST00000419493 DEFB115Q30KQ5 88 aa12.09□□□□□ -0.47
CTSA-205ENST00000419493 LRRC24Q50LG9 513 aa12.09□□□□□ -0.47
CTSA-205ENST00000419493 KRT26Q7Z3Y9 468 aa12.09□□□□□ -0.47
CTSA-205ENST00000419493 VPS37DQ86XT2 251 aa12.09□□□□□ -0.47
CTSA-205ENST00000419493 MYOZ2Q9NPC6 264 aa12.09□□□□□ -0.47
CTSA-205ENST00000419493 HDAC9Q9UKV0 1011 aa12.09□□□□□ -0.47
CTSA-205ENST00000419493 RIPOR2Q9Y4F9 1068 aa12.09□□□□□ -0.47
CTSA-205ENST00000419493 MYO3BQ8WXR4 1341 aa12.09□□□□□ -0.47
CTSA-205ENST00000419493 FRAT2O75474 233 aaPredicted RBP12.08□□□□□ -0.48
CTSA-205ENST00000419493 TRIM27P14373 513 aa12.08□□□□□ -0.48
CTSA-205ENST00000419493 SCARF1Q14162 830 aa12.08□□□□□ -0.48
CTSA-205ENST00000419493 DACT2Q5SW24 774 aa12.08□□□□□ -0.48
CTSA-205ENST00000419493 INTS3Q68E01 1043 aaKnown RBP12.08□□□□□ -0.48
CTSA-205ENST00000419493 ATF7IPQ6VMQ6 1270 aa12.08□□□□□ -0.48
CTSA-205ENST00000419493 C15orf52Q6ZUT6 534 aaKnown RBP12.08□□□□□ -0.48
CTSA-205ENST00000419493 KIAA0825Q8IV33 1275 aa12.08□□□□□ -0.48
CTSA-205ENST00000419493 SULF1Q8IWU6 871 aa12.08□□□□□ -0.48
CTSA-205ENST00000419493 JMYQ8N9B5 988 aa12.08□□□□□ -0.48
CTSA-205ENST00000419493 MEIS3Q99687 375 aa12.08□□□□□ -0.48
CTSA-205ENST00000419493 LRRFIP2Q9Y608 721 aaKnown RBP12.08□□□□□ -0.48
CTSA-205ENST00000419493 ZBED9Q6R2W3 1325 aa12.08□□□□□ -0.48
CTSA-205ENST00000419493 F8W031 263 aaPredicted RBP12.07□□□□□ -0.48
CTSA-205ENST00000419493 GNAI3P08754 354 aa12.07□□□□□ -0.48
CTSA-205ENST00000419493 HIBADHP31937 336 aaKnown RBP12.07□□□□□ -0.48
CTSA-205ENST00000419493 GYG1P46976 350 aa12.07□□□□□ -0.48
CTSA-205ENST00000419493 ZNF280AP59817 542 aaPredicted RBP12.07□□□□□ -0.48
CTSA-205ENST00000419493 CAVIN4Q5BKX8 364 aa12.07□□□□□ -0.48
CTSA-205ENST00000419493 CST9Q5W186 159 aa12.07□□□□□ -0.48
CTSA-205ENST00000419493 ZKSCAN2Q63HK3 967 aa12.07□□□□□ -0.48
CTSA-205ENST00000419493 GMLQ99445 158 aa12.07□□□□□ -0.48
CTSA-205ENST00000419493 SIL1Q9H173 461 aa12.07□□□□□ -0.48
CTSA-205ENST00000419493 GGA3Q9NZ52 723 aa12.07□□□□□ -0.48
CTSA-205ENST00000419493 JAG2Q9Y219 1238 aa12.07□□□□□ -0.48
CTSA-205ENST00000419493 CNTNAP1P78357 1384 aa12.06□□□□□ -0.48
CTSA-205ENST00000419493 EYA2O00167 538 aa12.06□□□□□ -0.48
CTSA-205ENST00000419493 PDE8BO95263 885 aa12.06□□□□□ -0.48
CTSA-205ENST00000419493 VEGFBP49765 207 aa12.06□□□□□ -0.48
CTSA-205ENST00000419493 ANGEL2Q5VTE6 544 aaKnown RBP12.06□□□□□ -0.48
CTSA-205ENST00000419493 DLK2Q6UY11 383 aa12.06□□□□□ -0.48
CTSA-205ENST00000419493 TNNQ9UQP3 1299 aa12.06□□□□□ -0.48
CTSA-205ENST00000419493 ASTN2O75129 1339 aaPredicted RBP12.06□□□□□ -0.48
CTSA-205ENST00000419493 RASSF10A6NK89 507 aa12.05□□□□□ -0.48
CTSA-205ENST00000419493 ADM5C9JUS6 153 aa12.05□□□□□ -0.48
CTSA-205ENST00000419493 SASH1O94885 1247 aa12.05□□□□□ -0.48
CTSA-205ENST00000419493 IFIT1P09914 478 aaKnown RBP12.05□□□□□ -0.48
CTSA-205ENST00000419493 IL1R1P14778 569 aa12.05□□□□□ -0.48
CTSA-205ENST00000419493 RBM5P52756 815 aaKnown RBP eCLIP12.05□□□□□ -0.48
CTSA-205ENST00000419493 PTPN12Q05209 780 aaKnown RBP12.05□□□□□ -0.48
CTSA-205ENST00000419493 NBPF9Q3BBW0 867 aa12.05□□□□□ -0.48
CTSA-205ENST00000419493 FTSJ3Q8IY81 847 aaKnown RBP12.05□□□□□ -0.48
CTSA-205ENST00000419493 FAM84BQ96KN1 310 aaPredicted RBP12.05□□□□□ -0.48
CTSA-205ENST00000419493 IQSEC3Q9UPP2 1182 aaPredicted RBP12.05□□□□□ -0.48
CTSA-205ENST00000419493 ECE1P42892 770 aa12.04□□□□□ -0.48
CTSA-205ENST00000419493 RFX5P48382 616 aaPredicted RBP12.04□□□□□ -0.48
CTSA-205ENST00000419493 MMP14P50281 582 aa12.04□□□□□ -0.48
CTSA-205ENST00000419493 PUM3Q15397 648 aaKnown RBP12.04□□□□□ -0.48
CTSA-205ENST00000419493 TMEM57Q8N5G2 664 aa12.04□□□□□ -0.48
CTSA-205ENST00000419493 C2orf69Q8N8R5 385 aa12.04□□□□□ -0.48
CTSA-205ENST00000419493 CEP126Q9P2H0 1117 aa12.04□□□□□ -0.48
CTSA-205ENST00000419493 SCAF8Q9UPN6 1271 aaKnown RBP12.04□□□□□ -0.48
CTSA-205ENST00000419493 TLL2Q9Y6L7 1015 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms