RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 GPT2Q8TD30 523 aa17.25■□□□□ 0.35
HLA-DPA1-242ENST00000419277 GTF3C6Q969F1 213 aa17.25■□□□□ 0.35
HLA-DPA1-242ENST00000419277 ZMYM6O95789 1325 aa17.25■□□□□ 0.35
HLA-DPA1-242ENST00000419277 THSD7AQ9UPZ6 1657 aa17.24■□□□□ 0.35
HLA-DPA1-242ENST00000419277 HMGN5P82970 282 aaKnown RBP17.24■□□□□ 0.35
HLA-DPA1-242ENST00000419277 FAM43AQ8N2R8 423 aa17.24■□□□□ 0.35
HLA-DPA1-242ENST00000419277 BRPF3Q9ULD4 1205 aa17.24■□□□□ 0.35
HLA-DPA1-242ENST00000419277 ELP1O95163 1332 aa17.24■□□□□ 0.35
HLA-DPA1-242ENST00000419277 CNTNAP4Q9C0A0 1308 aa17.24■□□□□ 0.35
HLA-DPA1-242ENST00000419277 CAMTA2O94983 1202 aa17.24■□□□□ 0.35
HLA-DPA1-242ENST00000419277 LARGE1O95461 756 aa17.24■□□□□ 0.35
HLA-DPA1-242ENST00000419277 IMMTQ16891 758 aaKnown RBP17.24■□□□□ 0.35
HLA-DPA1-242ENST00000419277 MTMR6Q9Y217 621 aa17.24■□□□□ 0.35
HLA-DPA1-242ENST00000419277 CPA1P15085 419 aa17.23■□□□□ 0.35
HLA-DPA1-242ENST00000419277 FKBP4Q02790 459 aaKnown RBP eCLIP17.23■□□□□ 0.35
HLA-DPA1-242ENST00000419277 CCDC173Q0VFZ6 552 aa17.23■□□□□ 0.35
HLA-DPA1-242ENST00000419277 UBE3CQ15386 1083 aa17.23■□□□□ 0.35
HLA-DPA1-242ENST00000419277 LRSAM1Q6UWE0 723 aa17.23■□□□□ 0.35
HLA-DPA1-242ENST00000419277 TBC1D2BQ9UPU7 963 aa17.23■□□□□ 0.35
HLA-DPA1-242ENST00000419277 SPATA31A6Q5VVP1 1343 aa17.23■□□□□ 0.35
HLA-DPA1-242ENST00000419277 CARMIL3Q8ND23 1372 aa17.22■□□□□ 0.35
HLA-DPA1-242ENST00000419277 SLC5A1P13866 664 aa17.22■□□□□ 0.35
HLA-DPA1-242ENST00000419277 NASPP49321 788 aaPredicted RBP17.22■□□□□ 0.35
HLA-DPA1-242ENST00000419277 LARP1BQ659C4 914 aaKnown RBP17.22■□□□□ 0.35
HLA-DPA1-242ENST00000419277 COL24A1Q17RW2 1714 aa17.22■□□□□ 0.35
HLA-DPA1-242ENST00000419277 KRT85P78386 507 aa17.21■□□□□ 0.35
HLA-DPA1-242ENST00000419277 FGD1P98174 961 aa17.21■□□□□ 0.35
HLA-DPA1-242ENST00000419277 FAM184AQ8NB25 1140 aa17.21■□□□□ 0.35
HLA-DPA1-242ENST00000419277 ZNF274Q96GC6 653 aaPredicted RBP17.21■□□□□ 0.35
HLA-DPA1-242ENST00000419277 SEC62Q99442 399 aaKnown RBP17.21■□□□□ 0.35
HLA-DPA1-242ENST00000419277 CDC5LQ99459 802 aaKnown RBP17.21■□□□□ 0.35
HLA-DPA1-242ENST00000419277 PFKFB2O60825 505 aa17.21■□□□□ 0.35
HLA-DPA1-242ENST00000419277 FGFR2P21802 821 aa17.21■□□□□ 0.35
HLA-DPA1-242ENST00000419277 EVCP57679 992 aa17.21■□□□□ 0.35
HLA-DPA1-242ENST00000419277 ST3GAL1Q11201 340 aa17.21■□□□□ 0.35
HLA-DPA1-242ENST00000419277 MPHOSPH8Q99549 860 aa17.21■□□□□ 0.35
HLA-DPA1-242ENST00000419277 SCAND2PQ9GZW5 306 aaPredicted RBP17.21■□□□□ 0.35
HLA-DPA1-242ENST00000419277 CCDC9Q9Y3X0 531 aaKnown RBP17.21■□□□□ 0.35
HLA-DPA1-242ENST00000419277 BCL9LQ86UU0 1499 aa17.21■□□□□ 0.34
HLA-DPA1-242ENST00000419277 A0A1B0GUL6 1792 aa17.2■□□□□ 0.34
HLA-DPA1-242ENST00000419277 ADORA1P30542 326 aa17.2■□□□□ 0.34
HLA-DPA1-242ENST00000419277 IGHMBP2P38935 993 aaKnown RBP17.2■□□□□ 0.34
HLA-DPA1-242ENST00000419277 CCDC129Q6ZRS4 1044 aa17.2■□□□□ 0.34
HLA-DPA1-242ENST00000419277 Q6ZUG5 572 aa17.2■□□□□ 0.34
HLA-DPA1-242ENST00000419277 ZSCAN16Q9H4T2 348 aaPredicted RBP17.2■□□□□ 0.34
HLA-DPA1-242ENST00000419277 NDUFB9Q9Y6M9 179 aa17.2■□□□□ 0.34
HLA-DPA1-242ENST00000419277 MYH15Q9Y2K3 1946 aa17.2■□□□□ 0.34
HLA-DPA1-242ENST00000419277 E7EWF7 191 aa17.19■□□□□ 0.34
HLA-DPA1-242ENST00000419277 DHX16O60231 1041 aaKnown RBP17.19■□□□□ 0.34
HLA-DPA1-242ENST00000419277 NTSR2O95665 410 aa17.19■□□□□ 0.34
HLA-DPA1-242ENST00000419277 ADD2P35612 726 aa17.19■□□□□ 0.34
HLA-DPA1-242ENST00000419277 EXOSC10Q01780 885 aaKnown RBP17.19■□□□□ 0.34
HLA-DPA1-242ENST00000419277 RC3H1Q5TC82 1133 aaKnown RBP17.19■□□□□ 0.34
HLA-DPA1-242ENST00000419277 ATL3Q6DD88 541 aa17.19■□□□□ 0.34
HLA-DPA1-242ENST00000419277 USP48Q86UV5 1035 aa17.19■□□□□ 0.34
HLA-DPA1-242ENST00000419277 GAS2L3Q86XJ1 694 aa17.19■□□□□ 0.34
HLA-DPA1-242ENST00000419277 FNBP4Q8N3X1 1017 aaPredicted RBP17.19■□□□□ 0.34
HLA-DPA1-242ENST00000419277 CASZ1Q86V15 1759 aa17.19■□□□□ 0.34
HLA-DPA1-242ENST00000419277 MCAMP43121 646 aa17.18■□□□□ 0.34
HLA-DPA1-242ENST00000419277 ZAP70P43403 619 aa17.18■□□□□ 0.34
HLA-DPA1-242ENST00000419277 WASHC4Q2M389 1173 aa17.18■□□□□ 0.34
HLA-DPA1-242ENST00000419277 CCDC183Q5T5S1 534 aa17.18■□□□□ 0.34
HLA-DPA1-242ENST00000419277 TMED8Q6PL24 325 aaPredicted RBP17.18■□□□□ 0.34
HLA-DPA1-242ENST00000419277 SMARCC2Q8TAQ2 1214 aa17.18■□□□□ 0.34
HLA-DPA1-242ENST00000419277 OSBP2Q969R2 916 aa17.18■□□□□ 0.34
HLA-DPA1-242ENST00000419277 TMEM63CQ9P1W3 806 aa17.18■□□□□ 0.34
HLA-DPA1-242ENST00000419277 BTAF1O14981 1849 aa17.18■□□□□ 0.34
HLA-DPA1-242ENST00000419277 VPS37CA5D8V6 355 aaPredicted RBP17.18■□□□□ 0.34
HLA-DPA1-242ENST00000419277 ITPK1Q13572 414 aa17.18■□□□□ 0.34
HLA-DPA1-242ENST00000419277 FOXD4L5Q5VV16 416 aaPredicted RBP17.18■□□□□ 0.34
HLA-DPA1-242ENST00000419277 SUSD4Q5VX71 490 aa17.18■□□□□ 0.34
HLA-DPA1-242ENST00000419277 CCDC102BQ68D86 513 aa17.18■□□□□ 0.34
HLA-DPA1-242ENST00000419277 FOXD4L4Q8WXT5 416 aaPredicted RBP17.18■□□□□ 0.34
HLA-DPA1-242ENST00000419277 LY75O60449 1722 aa17.18■□□□□ 0.34
HLA-DPA1-242ENST00000419277 TIAM2Q8IVF5 1701 aa17.17■□□□□ 0.34
HLA-DPA1-242ENST00000419277 M0R2C6 588 aa17.17■□□□□ 0.34
HLA-DPA1-242ENST00000419277 ZBTB22O15209 634 aa17.17■□□□□ 0.34
HLA-DPA1-242ENST00000419277 IGSF3O75054 1194 aa17.17■□□□□ 0.34
HLA-DPA1-242ENST00000419277 NAA16Q6N069 864 aaPredicted RBP17.17■□□□□ 0.34
HLA-DPA1-242ENST00000419277 PPP1R9BQ96SB3 815 aa17.17■□□□□ 0.34
HLA-DPA1-242ENST00000419277 NIP7Q9Y221 180 aaKnown RBP eCLIP17.17■□□□□ 0.34
HLA-DPA1-242ENST00000419277 CHD4Q14839 1912 aa17.17■□□□□ 0.34
HLA-DPA1-242ENST00000419277 NUTM2BA6NNL0 878 aaPredicted RBP17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 NUTM2EB1AL46 878 aaPredicted RBP17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 GPAA1O43292 621 aa17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 MCM5P33992 734 aa17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 MAP3K12Q12852 859 aa17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 HS1BP3Q53T59 392 aa17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 NUTM2AQ8IVF1 878 aaPredicted RBP17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 NECAB1Q8N987 351 aa17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 NCOA7Q8NI08 942 aa17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 BRF1Q92994 677 aa17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 TRIM44Q96DX7 344 aaPredicted RBP17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 NYXQ9GZU5 481 aa17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 TAF6LQ9Y6J9 622 aa17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 GNAT2P19087 354 aa17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 HMGB2P26583 209 aaKnown RBP17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 TRDNQ13061 729 aa17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 ALX1Q15699 326 aa17.16■□□□□ 0.34
HLA-DPA1-242ENST00000419277 STOX1Q6ZVD7 989 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms