RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 GPHNQ9NQX3 736 aaPredicted RBP13.51□□□□□ -0.25
DDR1-232ENST00000418800 ETF1P62495 437 aaKnown RBP13.51□□□□□ -0.25
DDR1-232ENST00000418800 SUCLG2Q96I99 432 aa13.51□□□□□ -0.25
DDR1-232ENST00000418800 HDAC5Q9UQL6 1122 aa13.51□□□□□ -0.25
DDR1-232ENST00000418800 COL3A1P02461 1466 aaPredicted RBP13.51□□□□□ -0.25
DDR1-232ENST00000418800 CTAGE5O15320 804 aa13.5□□□□□ -0.25
DDR1-232ENST00000418800 SCRN1Q12765 414 aa13.5□□□□□ -0.25
DDR1-232ENST00000418800 DESI2Q9BSY9 194 aa13.5□□□□□ -0.25
DDR1-232ENST00000418800 PDE11AQ9HCR9 933 aa13.5□□□□□ -0.25
DDR1-232ENST00000418800 CCZ1BP86790 482 aa13.5□□□□□ -0.25
DDR1-232ENST00000418800 CCZ1P86791 482 aaPredicted RBP13.5□□□□□ -0.25
DDR1-232ENST00000418800 FAM160A1Q05DH4 1040 aa13.5□□□□□ -0.25
DDR1-232ENST00000418800 PPP2R3AQ06190 1150 aa13.5□□□□□ -0.25
DDR1-232ENST00000418800 TOB2Q14106 344 aaPredicted RBP13.5□□□□□ -0.25
DDR1-232ENST00000418800 KRT32Q14532 448 aa13.5□□□□□ -0.25
DDR1-232ENST00000418800 NFXL1Q6ZNB6 911 aa13.5□□□□□ -0.25
DDR1-232ENST00000418800 RALYLQ86SE5 291 aaKnown RBP13.5□□□□□ -0.25
DDR1-232ENST00000418800 MAP4K1Q92918 833 aa13.5□□□□□ -0.25
DDR1-232ENST00000418800 HINFPQ9BQA5 517 aa13.5□□□□□ -0.25
DDR1-232ENST00000418800 ZSCAN16Q9H4T2 348 aaPredicted RBP13.5□□□□□ -0.25
DDR1-232ENST00000418800 ORC3Q9UBD5 711 aaPredicted RBP13.5□□□□□ -0.25
DDR1-232ENST00000418800 ADAM21Q9UKJ8 722 aa13.5□□□□□ -0.25
DDR1-232ENST00000418800 AGLP35573 1532 aa13.5□□□□□ -0.25
DDR1-232ENST00000418800 TTC41PQ6P2S7 1318 aa13.5□□□□□ -0.25
DDR1-232ENST00000418800 PRR36Q9H6K5 1346 aa13.5□□□□□ -0.25
DDR1-232ENST00000418800 NDUFA8P51970 172 aa13.5□□□□□ -0.25
DDR1-232ENST00000418800 E4F1Q66K89 784 aaPredicted RBP13.5□□□□□ -0.25
DDR1-232ENST00000418800 SSH2Q76I76 1423 aa13.49□□□□□ -0.25
DDR1-232ENST00000418800 SETD1BQ9UPS6 1966 aaKnown RBP13.49□□□□□ -0.25
DDR1-232ENST00000418800 SALL3Q9BXA9 1300 aa13.49□□□□□ -0.25
DDR1-232ENST00000418800 ZC3H6P61129 1189 aaKnown RBP13.49□□□□□ -0.25
DDR1-232ENST00000418800 DBF4Q9UBU7 674 aaPredicted RBP13.49□□□□□ -0.25
DDR1-232ENST00000418800 TIMM10P62072 90 aa13.49□□□□□ -0.25
DDR1-232ENST00000418800 PSME1Q06323 249 aa13.49□□□□□ -0.25
DDR1-232ENST00000418800 KIF4BQ2VIQ3 1234 aa13.49□□□□□ -0.25
DDR1-232ENST00000418800 CABLES1Q8TDN4 633 aa13.49□□□□□ -0.25
DDR1-232ENST00000418800 MRFAP1L1Q96HT8 127 aa13.49□□□□□ -0.25
DDR1-232ENST00000418800 DBNDD2Q9BQY9 259 aa13.49□□□□□ -0.25
DDR1-232ENST00000418800 JRKLQ9Y4A0 524 aa13.49□□□□□ -0.25
DDR1-232ENST00000418800 A0A1B0GUL7 405 aa13.48□□□□□ -0.25
DDR1-232ENST00000418800 GRM8O00222 908 aa13.48□□□□□ -0.25
DDR1-232ENST00000418800 CSB-PGBD3P0DP91 1061 aa13.48□□□□□ -0.25
DDR1-232ENST00000418800 ADKP55263 362 aaKnown RBP13.48□□□□□ -0.25
DDR1-232ENST00000418800 AKAP17AQ02040 695 aaKnown RBP13.48□□□□□ -0.25
DDR1-232ENST00000418800 TFCP2Q12800 502 aa13.48□□□□□ -0.25
DDR1-232ENST00000418800 BEND3Q5T5X7 828 aa13.48□□□□□ -0.25
DDR1-232ENST00000418800 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.48□□□□□ -0.25
DDR1-232ENST00000418800 EDC4Q6P2E9 1401 aaKnown RBP13.48□□□□□ -0.25
DDR1-232ENST00000418800 MROH2AA6NES4 1674 aa13.48□□□□□ -0.25
DDR1-232ENST00000418800 FANCCQ00597 558 aa13.48□□□□□ -0.25
DDR1-232ENST00000418800 CCDC150Q8NCX0 1101 aa13.48□□□□□ -0.25
DDR1-232ENST00000418800 TM6SF1Q9BZW5 370 aa13.48□□□□□ -0.25
DDR1-232ENST00000418800 PCDHA7Q9UN72 937 aa13.48□□□□□ -0.25
DDR1-232ENST00000418800 ADGRB2O60241 1585 aa13.48□□□□□ -0.25
DDR1-232ENST00000418800 ZC3H13Q5T200 1668 aaKnown RBP13.48□□□□□ -0.25
DDR1-232ENST00000418800 GOLGA8BA8MQT2 603 aa13.48□□□□□ -0.25
DDR1-232ENST00000418800 NYAP1Q6ZVC0 841 aa13.48□□□□□ -0.25
DDR1-232ENST00000418800 CENPHQ9H3R5 247 aa13.48□□□□□ -0.25
DDR1-232ENST00000418800 CYP21A2P08686 494 aa13.47□□□□□ -0.25
DDR1-232ENST00000418800 IQCB1Q15051 598 aa13.47□□□□□ -0.25
DDR1-232ENST00000418800 ICE2Q659A1 982 aa13.47□□□□□ -0.25
DDR1-232ENST00000418800 CLIC4Q9Y696 253 aa13.47□□□□□ -0.25
DDR1-232ENST00000418800 SPTLC2O15270 562 aa13.47□□□□□ -0.25
DDR1-232ENST00000418800 DNAJC21Q5F1R6 531 aaKnown RBP13.47□□□□□ -0.25
DDR1-232ENST00000418800 RRP12Q5JTH9 1297 aaKnown RBP13.47□□□□□ -0.25
DDR1-232ENST00000418800 EP400NLQ6ZTU2 488 aa13.47□□□□□ -0.25
DDR1-232ENST00000418800 SRCAPQ6ZRS2 3230 aa13.47□□□□□ -0.25
DDR1-232ENST00000418800 SASH1O94885 1247 aa13.46□□□□□ -0.25
DDR1-232ENST00000418800 FKBP15Q5T1M5 1219 aa13.46□□□□□ -0.25
DDR1-232ENST00000418800 RGS22Q8NE09 1264 aa13.46□□□□□ -0.25
DDR1-232ENST00000418800 KLF18A0A0U1RQI7 1052 aa13.46□□□□□ -0.25
DDR1-232ENST00000418800 ADGRB1O14514 1584 aa13.46□□□□□ -0.25
DDR1-232ENST00000418800 EIF3JO75822 258 aaKnown RBP13.46□□□□□ -0.25
DDR1-232ENST00000418800 CAVIN2O95810 425 aa13.46□□□□□ -0.25
DDR1-232ENST00000418800 RESTQ13127 1097 aa13.46□□□□□ -0.25
DDR1-232ENST00000418800 MTX1Q13505 466 aa13.46□□□□□ -0.25
DDR1-232ENST00000418800 TRMT44Q8IYL2 757 aaKnown RBP13.46□□□□□ -0.25
DDR1-232ENST00000418800 PARD6BQ9BYG5 372 aa13.46□□□□□ -0.25
DDR1-232ENST00000418800 FAN1Q9Y2M0 1017 aa13.46□□□□□ -0.25
DDR1-232ENST00000418800 AOX1Q06278 1338 aa13.46□□□□□ -0.26
DDR1-232ENST00000418800 ZSCAN12O43309 604 aa13.46□□□□□ -0.26
DDR1-232ENST00000418800 SYKP43405 635 aa13.46□□□□□ -0.26
DDR1-232ENST00000418800 STX17P56962 302 aa13.46□□□□□ -0.26
DDR1-232ENST00000418800 TRIM29Q14134 588 aa13.46□□□□□ -0.26
DDR1-232ENST00000418800 ZNF827Q17R98 1081 aa13.46□□□□□ -0.26
DDR1-232ENST00000418800 FOXR1Q6PIV2 292 aa13.46□□□□□ -0.26
DDR1-232ENST00000418800 U3KPZ7 1027 aaPredicted RBP13.46□□□□□ -0.26
DDR1-232ENST00000418800 ELP1O95163 1332 aa13.45□□□□□ -0.26
DDR1-232ENST00000418800 A0A0G2JLW4 131 aa13.45□□□□□ -0.26
DDR1-232ENST00000418800 CCP110O43303 1012 aa13.45□□□□□ -0.26
DDR1-232ENST00000418800 TAF5LO75529 589 aa13.45□□□□□ -0.26
DDR1-232ENST00000418800 ZNF202O95125 648 aa13.45□□□□□ -0.26
DDR1-232ENST00000418800 ARMCX5Q6P1M9 558 aa13.45□□□□□ -0.26
DDR1-232ENST00000418800 COPS6Q7L5N1 327 aa13.45□□□□□ -0.26
DDR1-232ENST00000418800 SUGCTQ9HAC7 445 aa13.45□□□□□ -0.26
DDR1-232ENST00000418800 TNRQ92752 1358 aa13.45□□□□□ -0.26
DDR1-232ENST00000418800 TPM1P09493 284 aa13.45□□□□□ -0.26
DDR1-232ENST00000418800 LRRFIP1Q32MZ4 808 aaKnown RBP13.45□□□□□ -0.26
DDR1-232ENST00000418800 LONRF3Q496Y0 759 aa13.45□□□□□ -0.26
DDR1-232ENST00000418800 CNNM3Q8NE01 707 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms