RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 JARID2Q92833 1246 aaPredicted RBP10.15□□□□□ -0.78
HLA-DPA1-241ENST00000417724 METTL22Q9BUU2 404 aaPredicted RBP10.15□□□□□ -0.78
HLA-DPA1-241ENST00000417724 BSDC1Q9NW68 430 aaPredicted RBP10.15□□□□□ -0.78
HLA-DPA1-241ENST00000417724 ADAMTS8Q9UP79 889 aa10.15□□□□□ -0.78
HLA-DPA1-241ENST00000417724 SCAF8Q9UPN6 1271 aaKnown RBP10.15□□□□□ -0.78
HLA-DPA1-241ENST00000417724 MYBBP1AQ9BQG0 1328 aaKnown RBP10.14□□□□□ -0.79
HLA-DPA1-241ENST00000417724 WNT10BO00744 389 aa10.14□□□□□ -0.79
HLA-DPA1-241ENST00000417724 FKTNO75072 461 aa10.14□□□□□ -0.79
HLA-DPA1-241ENST00000417724 ALDH1A1P00352 501 aa10.14□□□□□ -0.79
HLA-DPA1-241ENST00000417724 ZNF853P0CG23 659 aa10.14□□□□□ -0.79
HLA-DPA1-241ENST00000417724 GNAI1P63096 354 aa10.14□□□□□ -0.79
HLA-DPA1-241ENST00000417724 DACT2Q5SW24 774 aa10.14□□□□□ -0.79
HLA-DPA1-241ENST00000417724 STRIP1Q5VSL9 837 aa10.14□□□□□ -0.79
HLA-DPA1-241ENST00000417724 ARMC9Q7Z3E5 817 aa10.14□□□□□ -0.79
HLA-DPA1-241ENST00000417724 CFHR5Q9BXR6 569 aa10.14□□□□□ -0.79
HLA-DPA1-241ENST00000417724 COA1Q9GZY4 146 aa10.14□□□□□ -0.79
HLA-DPA1-241ENST00000417724 MINPP1Q9UNW1 487 aa10.14□□□□□ -0.79
HLA-DPA1-241ENST00000417724 MED23Q9ULK4 1368 aa10.14□□□□□ -0.79
HLA-DPA1-241ENST00000417724 WTIPA6NIX2 430 aaPredicted RBP10.13□□□□□ -0.79
HLA-DPA1-241ENST00000417724 CCT4P50991 539 aaKnown RBP10.13□□□□□ -0.79
HLA-DPA1-241ENST00000417724 CTSWP56202 376 aa10.13□□□□□ -0.79
HLA-DPA1-241ENST00000417724 INHBEP58166 350 aa10.13□□□□□ -0.79
HLA-DPA1-241ENST00000417724 PTPN12Q05209 780 aaKnown RBP10.13□□□□□ -0.79
HLA-DPA1-241ENST00000417724 MKRN3Q13064 507 aaKnown RBP10.13□□□□□ -0.79
HLA-DPA1-241ENST00000417724 CCDC30Q5VVM6 783 aa10.13□□□□□ -0.79
HLA-DPA1-241ENST00000417724 APOBEC3FQ8IUX4 373 aaKnown RBP10.13□□□□□ -0.79
HLA-DPA1-241ENST00000417724 TTLL11Q8NHH1 800 aa10.13□□□□□ -0.79
HLA-DPA1-241ENST00000417724 FBXW7Q969H0 707 aa10.13□□□□□ -0.79
HLA-DPA1-241ENST00000417724 GCC1Q96CN9 775 aa10.13□□□□□ -0.79
HLA-DPA1-241ENST00000417724 IFT57Q9NWB7 429 aa10.13□□□□□ -0.79
HLA-DPA1-241ENST00000417724 LEMD3Q9Y2U8 911 aa10.13□□□□□ -0.79
HLA-DPA1-241ENST00000417724 MYH3P11055 1940 aa10.12□□□□□ -0.79
HLA-DPA1-241ENST00000417724 NEXNQ0ZGT2 675 aa10.12□□□□□ -0.79
HLA-DPA1-241ENST00000417724 LDLRAD1Q5T700 205 aa10.12□□□□□ -0.79
HLA-DPA1-241ENST00000417724 SPRYD7Q5W111 196 aa10.12□□□□□ -0.79
HLA-DPA1-241ENST00000417724 TTLL5Q6EMB2 1281 aa10.12□□□□□ -0.79
HLA-DPA1-241ENST00000417724 KSR2Q6VAB6 950 aa10.12□□□□□ -0.79
HLA-DPA1-241ENST00000417724 SLC10A4Q96EP9 437 aa10.12□□□□□ -0.79
HLA-DPA1-241ENST00000417724 MXD3Q9BW11 206 aa10.12□□□□□ -0.79
HLA-DPA1-241ENST00000417724 MAP3K2Q9Y2U5 619 aa10.12□□□□□ -0.79
HLA-DPA1-241ENST00000417724 SASH1O94885 1247 aa10.11□□□□□ -0.79
HLA-DPA1-241ENST00000417724 IGHMBP2P38935 993 aaKnown RBP10.11□□□□□ -0.79
HLA-DPA1-241ENST00000417724 PRKG1Q13976 671 aa10.11□□□□□ -0.79
HLA-DPA1-241ENST00000417724 INTS3Q68E01 1043 aaKnown RBP10.11□□□□□ -0.79
HLA-DPA1-241ENST00000417724 C8orf58Q8NAV2 365 aa10.11□□□□□ -0.79
HLA-DPA1-241ENST00000417724 ANKRD2Q9GZV1 360 aa10.11□□□□□ -0.79
HLA-DPA1-241ENST00000417724 GREM2Q9H772 168 aa10.11□□□□□ -0.79
HLA-DPA1-241ENST00000417724 ANGEL1Q9UNK9 670 aaKnown RBP10.11□□□□□ -0.79
HLA-DPA1-241ENST00000417724 PI4KAP2A4QPH2 592 aa10.1□□□□□ -0.79
HLA-DPA1-241ENST00000417724 MANSC4A6NHS7 340 aaPredicted RBP10.1□□□□□ -0.79
HLA-DPA1-241ENST00000417724 PPP1R12BO60237 982 aaPredicted RBP10.1□□□□□ -0.79
HLA-DPA1-241ENST00000417724 IGKV5-2P06315 115 aa10.1□□□□□ -0.79
HLA-DPA1-241ENST00000417724 TXNRD3Q86VQ6 643 aa10.1□□□□□ -0.79
HLA-DPA1-241ENST00000417724 KIAA0825Q8IV33 1275 aa10.1□□□□□ -0.79
HLA-DPA1-241ENST00000417724 PI4KAP1Q8N8J0 262 aa10.1□□□□□ -0.79
HLA-DPA1-241ENST00000417724 R3HDMLQ9H3Y0 253 aa10.1□□□□□ -0.79
HLA-DPA1-241ENST00000417724 SPEF2Q9C093 1822 aa10.1□□□□□ -0.79
HLA-DPA1-241ENST00000417724 ZNF804BA4D1E1 1349 aa10.09□□□□□ -0.79
HLA-DPA1-241ENST00000417724 UNCXA6NJT0 531 aa10.09□□□□□ -0.79
HLA-DPA1-241ENST00000417724 APAF1O14727 1248 aa10.09□□□□□ -0.79
HLA-DPA1-241ENST00000417724 ZBTB48P10074 688 aaPredicted RBP10.09□□□□□ -0.79
HLA-DPA1-241ENST00000417724 GTF2IP78347 998 aa10.09□□□□□ -0.79
HLA-DPA1-241ENST00000417724 DDX10Q13206 875 aaKnown RBP10.09□□□□□ -0.79
HLA-DPA1-241ENST00000417724 DLGAP5Q15398 846 aa10.09□□□□□ -0.79
HLA-DPA1-241ENST00000417724 UBE3BQ7Z3V4 1068 aa10.09□□□□□ -0.79
HLA-DPA1-241ENST00000417724 IFNL1Q8IU54 200 aa10.09□□□□□ -0.79
HLA-DPA1-241ENST00000417724 ZBED3Q96IU2 234 aaPredicted RBP10.09□□□□□ -0.79
HLA-DPA1-241ENST00000417724 MPHOSPH8Q99549 860 aa10.09□□□□□ -0.79
HLA-DPA1-241ENST00000417724 STK31Q9BXU1 1019 aa10.09□□□□□ -0.79
HLA-DPA1-241ENST00000417724 DEFB129Q9H1M3 183 aa10.09□□□□□ -0.79
HLA-DPA1-241ENST00000417724 TRIM17Q9Y577 477 aa10.09□□□□□ -0.79
HLA-DPA1-241ENST00000417724 KIAA0100Q14667 2235 aaKnown RBP10.09□□□□□ -0.79
HLA-DPA1-241ENST00000417724 NEURL1BA8MQ27 555 aa10.08□□□□□ -0.8
HLA-DPA1-241ENST00000417724 H7C1W4 665 aa10.08□□□□□ -0.8
HLA-DPA1-241ENST00000417724 MYO1BO43795 1136 aa10.08□□□□□ -0.8
HLA-DPA1-241ENST00000417724 KCNJ4P48050 445 aa10.08□□□□□ -0.8
HLA-DPA1-241ENST00000417724 MAP3K11Q16584 847 aa10.08□□□□□ -0.8
HLA-DPA1-241ENST00000417724 CWF19L2Q2TBE0 894 aaKnown RBP10.08□□□□□ -0.8
HLA-DPA1-241ENST00000417724 SUPT20HL1Q3ZLR7 823 aa10.08□□□□□ -0.8
HLA-DPA1-241ENST00000417724 OTUD7BQ6GQQ9 843 aa10.08□□□□□ -0.8
HLA-DPA1-241ENST00000417724 OTOP1Q7RTM1 612 aa10.08□□□□□ -0.8
HLA-DPA1-241ENST00000417724 PPP2R3BQ9Y5P8 575 aa10.08□□□□□ -0.8
HLA-DPA1-241ENST00000417724 ZNF646O15015 1829 aaPredicted RBP10.07□□□□□ -0.8
HLA-DPA1-241ENST00000417724 COL1A1P02452 1464 aaPredicted RBP10.07□□□□□ -0.8
HLA-DPA1-241ENST00000417724 ITGA6P23229 1130 aa10.07□□□□□ -0.8
HLA-DPA1-241ENST00000417724 MTMR14Q8NCE2 650 aa10.07□□□□□ -0.8
HLA-DPA1-241ENST00000417724 ERO1AQ96HE7 468 aa10.07□□□□□ -0.8
HLA-DPA1-241ENST00000417724 PLA2G12BQ9BX93 195 aa10.07□□□□□ -0.8
HLA-DPA1-241ENST00000417724 CD209Q9NNX6 404 aa10.07□□□□□ -0.8
HLA-DPA1-241ENST00000417724 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.07□□□□□ -0.8
HLA-DPA1-241ENST00000417724 KLRK1P26718 216 aa10.06□□□□□ -0.8
HLA-DPA1-241ENST00000417724 IREB2P48200 963 aaKnown RBP10.06□□□□□ -0.8
HLA-DPA1-241ENST00000417724 HABP4Q5JVS0 413 aaKnown RBP10.06□□□□□ -0.8
HLA-DPA1-241ENST00000417724 TSPYL6Q8N831 410 aa10.06□□□□□ -0.8
HLA-DPA1-241ENST00000417724 WNK4Q96J92 1243 aa10.06□□□□□ -0.8
HLA-DPA1-241ENST00000417724 CLMNQ96JQ2 1002 aa10.06□□□□□ -0.8
HLA-DPA1-241ENST00000417724 FZD1Q9UP38 647 aa10.06□□□□□ -0.8
HLA-DPA1-241ENST00000417724 PTPN22Q9Y2R2 807 aa10.06□□□□□ -0.8
HLA-DPA1-241ENST00000417724 POTEFA5A3E0 1075 aa10.05□□□□□ -0.8
HLA-DPA1-241ENST00000417724 IGF2BP3O00425 579 aaKnown RBP eCLIP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms