RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 PAPPA2Q9BXP8 1791 aa12.9□□□□□ -0.34
HDLBP-206ENST00000417540 CT47B1P0C2W7 299 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-206ENST00000417540 HSPA1AP0DMV8 641 aaKnown RBP12.9□□□□□ -0.34
HDLBP-206ENST00000417540 HSPA1BP0DMV9 641 aaKnown RBP12.9□□□□□ -0.34
HDLBP-206ENST00000417540 TBC1D10BQ4KMP7 808 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-206ENST00000417540 CLUAP1Q96AJ1 413 aa12.9□□□□□ -0.34
HDLBP-206ENST00000417540 MPHOSPH8Q99549 860 aa12.9□□□□□ -0.34
HDLBP-206ENST00000417540 GLIS2Q9BZE0 524 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-206ENST00000417540 VPS33BQ9H267 617 aa12.9□□□□□ -0.34
HDLBP-206ENST00000417540 CLEC11AQ9Y240 323 aa12.9□□□□□ -0.34
HDLBP-206ENST00000417540 LRRFIP2Q9Y608 721 aaKnown RBP12.9□□□□□ -0.34
HDLBP-206ENST00000417540 AOX1Q06278 1338 aa12.89□□□□□ -0.35
HDLBP-206ENST00000417540 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-206ENST00000417540 RLBP1P12271 317 aa12.89□□□□□ -0.35
HDLBP-206ENST00000417540 RFX5P48382 616 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-206ENST00000417540 TAF7LQ5H9L4 462 aa12.89□□□□□ -0.35
HDLBP-206ENST00000417540 FRAT1Q92837 279 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-206ENST00000417540 ADARB2Q9NS39 739 aaKnown RBP12.89□□□□□ -0.35
HDLBP-206ENST00000417540 ADM5C9JUS6 153 aa12.88□□□□□ -0.35
HDLBP-206ENST00000417540 PLIN1O60240 522 aa12.88□□□□□ -0.35
HDLBP-206ENST00000417540 BRPF1P55201 1214 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-206ENST00000417540 ZC3H12CQ9C0D7 883 aaKnown RBP12.88□□□□□ -0.35
HDLBP-206ENST00000417540 MKRN1Q9UHC7 482 aaKnown RBP12.88□□□□□ -0.35
HDLBP-206ENST00000417540 PA2G4Q9UQ80 394 aaKnown RBP12.88□□□□□ -0.35
HDLBP-206ENST00000417540 PCDHAC2Q9Y5I4 1007 aa12.88□□□□□ -0.35
HDLBP-206ENST00000417540 MAST2Q6P0Q8 1798 aa12.87□□□□□ -0.35
HDLBP-206ENST00000417540 KCNJ4P48050 445 aa12.87□□□□□ -0.35
HDLBP-206ENST00000417540 CCDC57Q2TAC2 916 aa12.87□□□□□ -0.35
HDLBP-206ENST00000417540 KIF4BQ2VIQ3 1234 aa12.87□□□□□ -0.35
HDLBP-206ENST00000417540 DACT2Q5SW24 774 aa12.87□□□□□ -0.35
HDLBP-206ENST00000417540 RSBN1LQ6PCB5 846 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-206ENST00000417540 CERS5Q8N5B7 392 aa12.87□□□□□ -0.35
HDLBP-206ENST00000417540 TMEM57Q8N5G2 664 aa12.87□□□□□ -0.35
HDLBP-206ENST00000417540 VGLL2Q8N8G2 317 aa12.87□□□□□ -0.35
HDLBP-206ENST00000417540 API5Q9BZZ5 524 aaKnown RBP12.87□□□□□ -0.35
HDLBP-206ENST00000417540 C1orf115Q9H7X2 142 aa12.87□□□□□ -0.35
HDLBP-206ENST00000417540 CNNM1Q9NRU3 951 aa12.87□□□□□ -0.35
HDLBP-206ENST00000417540 GGA3Q9NZ52 723 aa12.87□□□□□ -0.35
HDLBP-206ENST00000417540 CNOT7Q9UIV1 285 aaKnown RBP12.87□□□□□ -0.35
HDLBP-206ENST00000417540 SSC5DA1L4H1 1573 aa12.86□□□□□ -0.35
HDLBP-206ENST00000417540 CNTNAP1P78357 1384 aa12.86□□□□□ -0.35
HDLBP-206ENST00000417540 SASH1O94885 1247 aa12.86□□□□□ -0.35
HDLBP-206ENST00000417540 VIL1P09327 827 aaKnown RBP12.86□□□□□ -0.35
HDLBP-206ENST00000417540 TNIP1Q15025 636 aa12.86□□□□□ -0.35
HDLBP-206ENST00000417540 RBM26Q5T8P6 1007 aaKnown RBP12.86□□□□□ -0.35
HDLBP-206ENST00000417540 LDHAL6AQ6ZMR3 332 aa12.86□□□□□ -0.35
HDLBP-206ENST00000417540 USP50Q70EL3 339 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-206ENST00000417540 CNTROBQ8N137 903 aa12.86□□□□□ -0.35
HDLBP-206ENST00000417540 GMLQ99445 158 aa12.86□□□□□ -0.35
HDLBP-206ENST00000417540 SIL1Q9H173 461 aa12.86□□□□□ -0.35
HDLBP-206ENST00000417540 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-206ENST00000417540 MYO5AQ9Y4I1 1855 aaKnown RBP12.85□□□□□ -0.35
HDLBP-206ENST00000417540 UBTFL1P0CB47 393 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-206ENST00000417540 GYG1P46976 350 aa12.85□□□□□ -0.35
HDLBP-206ENST00000417540 ATF7IPQ6VMQ6 1270 aa12.85□□□□□ -0.35
HDLBP-206ENST00000417540 PNMA8AQ86V59 439 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-206ENST00000417540 IQSEC3Q9UPP2 1182 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-206ENST00000417540 LEMD3Q9Y2U8 911 aa12.85□□□□□ -0.35
HDLBP-206ENST00000417540 USP17L3A6NCW0 530 aa12.84□□□□□ -0.35
HDLBP-206ENST00000417540 USP17L4A6NCW7 530 aa12.84□□□□□ -0.35
HDLBP-206ENST00000417540 G3V3G9 751 aa12.84□□□□□ -0.35
HDLBP-206ENST00000417540 PTPN12Q05209 780 aaKnown RBP12.84□□□□□ -0.35
HDLBP-206ENST00000417540 GRIK5Q16478 980 aa12.84□□□□□ -0.35
HDLBP-206ENST00000417540 METTL24Q5JXM2 366 aa12.84□□□□□ -0.35
HDLBP-206ENST00000417540 DCAF8Q5TAQ9 597 aa12.84□□□□□ -0.35
HDLBP-206ENST00000417540 USP17L1Q7RTZ2 530 aa12.84□□□□□ -0.35
HDLBP-206ENST00000417540 ANKRD2Q9GZV1 360 aa12.84□□□□□ -0.35
HDLBP-206ENST00000417540 ZNF408Q9H9D4 720 aa12.84□□□□□ -0.35
HDLBP-206ENST00000417540 CD209Q9NNX6 404 aa12.84□□□□□ -0.35
HDLBP-206ENST00000417540 RIPOR2Q9Y4F9 1068 aa12.84□□□□□ -0.35
HDLBP-206ENST00000417540 RPS12P25398 132 aaKnown RBP12.83□□□□□ -0.36
HDLBP-206ENST00000417540 ZNF280AP59817 542 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-206ENST00000417540 GTF2IP78347 998 aa12.83□□□□□ -0.36
HDLBP-206ENST00000417540 INTS3Q68E01 1043 aaKnown RBP12.83□□□□□ -0.36
HDLBP-206ENST00000417540 ATG9AQ7Z3C6 839 aa12.83□□□□□ -0.36
HDLBP-206ENST00000417540 KIAA0825Q8IV33 1275 aa12.83□□□□□ -0.36
HDLBP-206ENST00000417540 COA1Q9GZY4 146 aa12.83□□□□□ -0.36
HDLBP-206ENST00000417540 CREBZFQ9NS37 354 aa12.83□□□□□ -0.36
HDLBP-206ENST00000417540 F8W031 263 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-206ENST00000417540 CST9Q5W186 159 aa12.82□□□□□ -0.36
HDLBP-206ENST00000417540 DPF2Q92785 391 aa12.82□□□□□ -0.36
HDLBP-206ENST00000417540 LAMB1P07942 1786 aa12.81□□□□□ -0.36
HDLBP-206ENST00000417540 PNMA6EA0A0J9YXQ4 647 aa12.81□□□□□ -0.36
HDLBP-206ENST00000417540 ADORA1P30542 326 aa12.81□□□□□ -0.36
HDLBP-206ENST00000417540 NBPF9Q3BBW0 867 aa12.81□□□□□ -0.36
HDLBP-206ENST00000417540 ANGEL2Q5VTE6 544 aaKnown RBP12.81□□□□□ -0.36
HDLBP-206ENST00000417540 ZKSCAN2Q63HK3 967 aa12.81□□□□□ -0.36
HDLBP-206ENST00000417540 C15orf52Q6ZUT6 534 aaKnown RBP12.81□□□□□ -0.36
HDLBP-206ENST00000417540 PODNQ7Z5L7 613 aa12.81□□□□□ -0.36
HDLBP-206ENST00000417540 PANK1Q8TE04 598 aa12.81□□□□□ -0.36
HDLBP-206ENST00000417540 MYOZ2Q9NPC6 264 aa12.81□□□□□ -0.36
HDLBP-206ENST00000417540 MROH5Q6ZUA9 1318 aa12.81□□□□□ -0.36
HDLBP-206ENST00000417540 DOCK2Q92608 1830 aa12.81□□□□□ -0.36
HDLBP-206ENST00000417540 TMEM88BA6NKF7 163 aa12.8□□□□□ -0.36
HDLBP-206ENST00000417540 H7C1D1 291 aa12.8□□□□□ -0.36
HDLBP-206ENST00000417540 EYA2O00167 538 aa12.8□□□□□ -0.36
HDLBP-206ENST00000417540 CELF2O95319 508 aaKnown RBP12.8□□□□□ -0.36
HDLBP-206ENST00000417540 IL1R1P14778 569 aa12.8□□□□□ -0.36
HDLBP-206ENST00000417540 FGFR2P21802 821 aa12.8□□□□□ -0.36
HDLBP-206ENST00000417540 CHAF1AQ13111 956 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms