RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 USP17L8P0C7I0 530 aa23.37■■□□□ 1.33
VPS16-204ENST00000417508 FOXO4P98177 505 aa23.37■■□□□ 1.33
VPS16-204ENST00000417508 IFIT5Q13325 482 aaKnown RBP23.37■■□□□ 1.33
VPS16-204ENST00000417508 ZNF408Q9H9D4 720 aa23.37■■□□□ 1.33
VPS16-204ENST00000417508 SPEF2Q9C093 1822 aa23.37■■□□□ 1.33
VPS16-204ENST00000417508 WTIPA6NIX2 430 aaPredicted RBP23.36■■□□□ 1.33
VPS16-204ENST00000417508 GRM8O00222 908 aa23.36■■□□□ 1.33
VPS16-204ENST00000417508 STRIP1Q5VSL9 837 aa23.36■■□□□ 1.33
VPS16-204ENST00000417508 BEGAINQ9BUH8 593 aa23.36■■□□□ 1.33
VPS16-204ENST00000417508 C9orf78Q9NZ63 289 aaPredicted RBP23.36■■□□□ 1.33
VPS16-204ENST00000417508 MYO3BQ8WXR4 1341 aa23.35■■□□□ 1.33
VPS16-204ENST00000417508 E9PSI1 815 aa23.35■■□□□ 1.33
VPS16-204ENST00000417508 SULF1Q8IWU6 871 aa23.35■■□□□ 1.33
VPS16-204ENST00000417508 SRCIN1Q9C0H9 1055 aa23.35■■□□□ 1.33
VPS16-204ENST00000417508 CHRNDQ07001 517 aa23.34■■□□□ 1.33
VPS16-204ENST00000417508 C2orf69Q8N8R5 385 aa23.34■■□□□ 1.33
VPS16-204ENST00000417508 MYOZ2Q9NPC6 264 aa23.34■■□□□ 1.33
VPS16-204ENST00000417508 KCNJ4P48050 445 aa23.33■■□□□ 1.33
VPS16-204ENST00000417508 GRM1Q13255 1194 aa23.33■■□□□ 1.33
VPS16-204ENST00000417508 SCARF1Q14162 830 aa23.33■■□□□ 1.33
VPS16-204ENST00000417508 DACT2Q5SW24 774 aa23.33■■□□□ 1.33
VPS16-204ENST00000417508 LMBR1LQ6UX01 489 aa23.33■■□□□ 1.33
VPS16-204ENST00000417508 OGFOD1Q8N543 542 aa23.33■■□□□ 1.33
VPS16-204ENST00000417508 CCDC57Q2TAC2 916 aa23.32■■□□□ 1.32
VPS16-204ENST00000417508 SLC4A10Q6U841 1118 aa23.32■■□□□ 1.32
VPS16-204ENST00000417508 C15orf52Q6ZUT6 534 aaKnown RBP23.32■■□□□ 1.32
VPS16-204ENST00000417508 TXNRD3Q86VQ6 643 aa23.32■■□□□ 1.32
VPS16-204ENST00000417508 GBA2Q9HCG7 927 aaPredicted RBP23.32■■□□□ 1.32
VPS16-204ENST00000417508 GGA3Q9NZ52 723 aa23.32■■□□□ 1.32
VPS16-204ENST00000417508 CHMP3Q9Y3E7 222 aa23.32■■□□□ 1.32
VPS16-204ENST00000417508 PITPNM2Q9BZ72 1349 aa23.32■■□□□ 1.32
VPS16-204ENST00000417508 THSD7BQ9C0I4 1608 aa23.31■■□□□ 1.32
VPS16-204ENST00000417508 LBX1P52954 281 aa23.31■■□□□ 1.32
VPS16-204ENST00000417508 HUNKP57058 714 aa23.31■■□□□ 1.32
VPS16-204ENST00000417508 TTLL5Q6EMB2 1281 aa23.31■■□□□ 1.32
VPS16-204ENST00000417508 ADM5C9JUS6 153 aa23.29■■□□□ 1.32
VPS16-204ENST00000417508 CA12O43570 354 aa23.29■■□□□ 1.32
VPS16-204ENST00000417508 HSPA8P11142 646 aaKnown RBP23.29■■□□□ 1.32
VPS16-204ENST00000417508 SLFN5Q08AF3 891 aa23.29■■□□□ 1.32
VPS16-204ENST00000417508 NOGQ13253 232 aa23.29■■□□□ 1.32
VPS16-204ENST00000417508 TAF7LQ5H9L4 462 aa23.29■■□□□ 1.32
VPS16-204ENST00000417508 ANGEL2Q5VTE6 544 aaKnown RBP23.29■■□□□ 1.32
VPS16-204ENST00000417508 LDHAL6AQ6ZMR3 332 aa23.29■■□□□ 1.32
VPS16-204ENST00000417508 MRPL50Q8N5N7 158 aaKnown RBP23.29■■□□□ 1.32
VPS16-204ENST00000417508 PTPRCP08575 1304 aa23.29■■□□□ 1.32
VPS16-204ENST00000417508 AOC2O75106 756 aa23.28■■□□□ 1.32
VPS16-204ENST00000417508 BRPF1P55201 1214 aaPredicted RBP23.28■■□□□ 1.32
VPS16-204ENST00000417508 EPHA10Q5JZY3 1008 aa23.28■■□□□ 1.32
VPS16-204ENST00000417508 RGMBQ6NW40 437 aa23.28■■□□□ 1.32
VPS16-204ENST00000417508 DLK2Q6UY11 383 aa23.28■■□□□ 1.32
VPS16-204ENST00000417508 FBXW7Q969H0 707 aa23.28■■□□□ 1.32
VPS16-204ENST00000417508 CCDC102AQ96A19 550 aa23.28■■□□□ 1.32
VPS16-204ENST00000417508 CD209Q9NNX6 404 aa23.28■■□□□ 1.32
VPS16-204ENST00000417508 HDAC9Q9UKV0 1011 aa23.27■■□□□ 1.32
VPS16-204ENST00000417508 UTYO14607 1347 aa23.27■■□□□ 1.32
VPS16-204ENST00000417508 TAF5LO75529 589 aa23.26■■□□□ 1.31
VPS16-204ENST00000417508 FKBP1BP68106 108 aa23.26■■□□□ 1.31
VPS16-204ENST00000417508 CDCA5Q96FF9 252 aa23.26■■□□□ 1.31
VPS16-204ENST00000417508 CNNM1Q9NRU3 951 aa23.26■■□□□ 1.31
VPS16-204ENST00000417508 ASTN2O75129 1339 aaPredicted RBP23.26■■□□□ 1.31
VPS16-204ENST00000417508 CCER2I3L3R5 266 aa23.25■■□□□ 1.31
VPS16-204ENST00000417508 KLRK1P26718 216 aa23.25■■□□□ 1.31
VPS16-204ENST00000417508 GTF2IP78347 998 aa23.25■■□□□ 1.31
VPS16-204ENST00000417508 ALDH1L2Q3SY69 923 aa23.25■■□□□ 1.31
VPS16-204ENST00000417508 ZNF804AQ7Z570 1209 aa23.25■■□□□ 1.31
VPS16-204ENST00000417508 HELBQ8NG08 1087 aaPredicted RBP23.25■■□□□ 1.31
VPS16-204ENST00000417508 IRS2Q9Y4H2 1338 aa23.25■■□□□ 1.31
VPS16-204ENST00000417508 MXD3Q9BW11 206 aa23.24■■□□□ 1.31
VPS16-204ENST00000417508 WNT10BO00744 389 aa23.23■■□□□ 1.31
VPS16-204ENST00000417508 NBPF7P0C2Y1 421 aaPredicted RBP23.23■■□□□ 1.31
VPS16-204ENST00000417508 IL1R1P14778 569 aa23.23■■□□□ 1.31
VPS16-204ENST00000417508 NBPF9Q3BBW0 867 aa23.23■■□□□ 1.31
VPS16-204ENST00000417508 SSH1Q8WYL5 1049 aa23.23■■□□□ 1.31
VPS16-204ENST00000417508 SUCLG2Q96I99 432 aa23.23■■□□□ 1.31
VPS16-204ENST00000417508 ZNF594Q96JF6 807 aaPredicted RBP23.23■■□□□ 1.31
VPS16-204ENST00000417508 ZNF646O15015 1829 aaPredicted RBP23.22■■□□□ 1.31
VPS16-204ENST00000417508 CT47B1P0C2W7 299 aaPredicted RBP23.22■■□□□ 1.31
VPS16-204ENST00000417508 ZNF157P51786 506 aaPredicted RBP23.22■■□□□ 1.31
VPS16-204ENST00000417508 FKBP1AP62942 108 aaKnown RBP23.22■■□□□ 1.31
VPS16-204ENST00000417508 UBE4AQ14139 1066 aa23.22■■□□□ 1.31
VPS16-204ENST00000417508 TRMT2AQ8IZ69 625 aaKnown RBP23.22■■□□□ 1.31
VPS16-204ENST00000417508 KAZALD1Q96I82 304 aa23.22■■□□□ 1.31
VPS16-204ENST00000417508 SNAP23O00161 211 aa23.21■■□□□ 1.31
VPS16-204ENST00000417508 RABL6Q3YEC7 729 aaPredicted RBP23.21■■□□□ 1.31
VPS16-204ENST00000417508 FAM155AB1AL88 458 aaPredicted RBP23.2■■□□□ 1.3
VPS16-204ENST00000417508 PLIN1O60240 522 aa23.2■■□□□ 1.3
VPS16-204ENST00000417508 CAPN15O75808 1086 aa23.2■■□□□ 1.3
VPS16-204ENST00000417508 KIAA0825Q8IV33 1275 aa23.2■■□□□ 1.3
VPS16-204ENST00000417508 REM2Q8IYK8 340 aaPredicted RBP23.2■■□□□ 1.3
VPS16-204ENST00000417508 MROH5Q6ZUA9 1318 aa23.19■■□□□ 1.3
VPS16-204ENST00000417508 SASH1O94885 1247 aa23.19■■□□□ 1.3
VPS16-204ENST00000417508 MTMR14Q8NCE2 650 aa23.19■■□□□ 1.3
VPS16-204ENST00000417508 ZBED3Q96IU2 234 aaPredicted RBP23.19■■□□□ 1.3
VPS16-204ENST00000417508 A0A1B0GUL6 1792 aa23.19■■□□□ 1.3
VPS16-204ENST00000417508 NF2P35240 595 aa23.18■■□□□ 1.3
VPS16-204ENST00000417508 APOBEC3FQ8IUX4 373 aaKnown RBP23.18■■□□□ 1.3
VPS16-204ENST00000417508 CDCA7LQ96GN5 454 aa23.18■■□□□ 1.3
VPS16-204ENST00000417508 BICC1Q9H694 974 aaKnown RBP23.18■■□□□ 1.3
VPS16-204ENST00000417508 RIPOR2Q9Y4F9 1068 aa23.18■■□□□ 1.3
VPS16-204ENST00000417508 SLC10A3P09131 477 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms