RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 KIAA1211Q6ZU35 1233 aa5.22□□□□□ -1.57
LINC00428-201ENST00000415620 BEND4Q6ZU67 534 aa5.22□□□□□ -1.57
LINC00428-201ENST00000415620 POU5F2Q8N7G0 328 aa5.22□□□□□ -1.57
LINC00428-201ENST00000415620 SPACA7Q96KW9 195 aa5.22□□□□□ -1.57
LINC00428-201ENST00000415620 KCNK4Q9NYG8 393 aa5.22□□□□□ -1.57
LINC00428-201ENST00000415620 PIM2Q9P1W9 311 aa5.22□□□□□ -1.57
LINC00428-201ENST00000415620 FSCN2O14926 492 aa5.21□□□□□ -1.58
LINC00428-201ENST00000415620 SMNDC1O75940 238 aaKnown RBP eCLIP5.21□□□□□ -1.58
LINC00428-201ENST00000415620 TRIP4Q15650 581 aaPredicted RBP5.21□□□□□ -1.58
LINC00428-201ENST00000415620 COX20Q5RI15 118 aa5.21□□□□□ -1.58
LINC00428-201ENST00000415620 CEP135Q66GS9 1140 aa5.21□□□□□ -1.58
LINC00428-201ENST00000415620 TXNDC11Q6PKC3 985 aa5.21□□□□□ -1.58
LINC00428-201ENST00000415620 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.21□□□□□ -1.58
LINC00428-201ENST00000415620 NLRP13Q86W25 1043 aa5.21□□□□□ -1.58
LINC00428-201ENST00000415620 PROSER2Q86WR7 435 aaPredicted RBP5.21□□□□□ -1.58
LINC00428-201ENST00000415620 LACRTQ9GZZ8 138 aa5.21□□□□□ -1.58
LINC00428-201ENST00000415620 VRTNQ9H8Y1 702 aa5.21□□□□□ -1.58
LINC00428-201ENST00000415620 ATG3Q9NT62 314 aa5.21□□□□□ -1.58
LINC00428-201ENST00000415620 HIF3AQ9Y2N7 669 aa5.21□□□□□ -1.58
LINC00428-201ENST00000415620 FAM177BA6PVY3 158 aa5.2□□□□□ -1.58
LINC00428-201ENST00000415620 CDC25BP30305 580 aa5.2□□□□□ -1.58
LINC00428-201ENST00000415620 HOXA10P31260 410 aaPredicted RBP5.2□□□□□ -1.58
LINC00428-201ENST00000415620 ANKRD34AQ69YU3 496 aa5.2□□□□□ -1.58
LINC00428-201ENST00000415620 ETFBKMTQ8IXQ9 262 aa5.2□□□□□ -1.58
LINC00428-201ENST00000415620 CLUAP1Q96AJ1 413 aa5.2□□□□□ -1.58
LINC00428-201ENST00000415620 FBXL18Q96ME1 805 aa5.2□□□□□ -1.58
LINC00428-201ENST00000415620 LEMD3Q9Y2U8 911 aa5.2□□□□□ -1.58
LINC00428-201ENST00000415620 HYAL2Q12891 473 aa5.19□□□□□ -1.58
LINC00428-201ENST00000415620 FAM26DQ5JW98 314 aa5.19□□□□□ -1.58
LINC00428-201ENST00000415620 COL13A1Q5TAT6 717 aaPredicted RBP5.19□□□□□ -1.58
LINC00428-201ENST00000415620 ADAMTSL4Q6UY14 1074 aa5.19□□□□□ -1.58
LINC00428-201ENST00000415620 OR13H1Q8NG92 308 aa5.19□□□□□ -1.58
LINC00428-201ENST00000415620 MFSD14AQ96MC6 490 aa5.19□□□□□ -1.58
LINC00428-201ENST00000415620 CARD10Q9BWT7 1032 aa5.19□□□□□ -1.58
LINC00428-201ENST00000415620 KRTAP4-2Q9BYR5 136 aa5.19□□□□□ -1.58
LINC00428-201ENST00000415620 JUNBP17275 347 aaPredicted RBP5.18□□□□□ -1.58
LINC00428-201ENST00000415620 FKBP5Q13451 457 aaPredicted RBP5.18□□□□□ -1.58
LINC00428-201ENST00000415620 CBLL1Q75N03 491 aa5.18□□□□□ -1.58
LINC00428-201ENST00000415620 TP53INP2Q8IXH6 220 aa5.18□□□□□ -1.58
LINC00428-201ENST00000415620 RNF208Q9H0X6 261 aa5.18□□□□□ -1.58
LINC00428-201ENST00000415620 SEC31BQ9NQW1 1179 aa5.18□□□□□ -1.58
LINC00428-201ENST00000415620 CCDC39Q9UFE4 941 aa5.18□□□□□ -1.58
LINC00428-201ENST00000415620 DDX3YO15523 660 aaKnown RBP5.17□□□□□ -1.58
LINC00428-201ENST00000415620 GAS2O43903 313 aaKnown RBP5.17□□□□□ -1.58
LINC00428-201ENST00000415620 KIF4AO95239 1232 aa5.17□□□□□ -1.58
LINC00428-201ENST00000415620 FOSL1P15407 271 aa5.17□□□□□ -1.58
LINC00428-201ENST00000415620 LMOD1P29536 600 aaPredicted RBP5.17□□□□□ -1.58
LINC00428-201ENST00000415620 PREPP48147 710 aa5.17□□□□□ -1.58
LINC00428-201ENST00000415620 ATP11AP98196 1134 aa5.17□□□□□ -1.58
LINC00428-201ENST00000415620 CPSF6Q16630 551 aaKnown RBP eCLIP5.17□□□□□ -1.58
LINC00428-201ENST00000415620 CFAP70Q5T0N1 1121 aa5.17□□□□□ -1.58
LINC00428-201ENST00000415620 FDX2Q6P4F2 183 aa5.17□□□□□ -1.58
LINC00428-201ENST00000415620 UBASH3BQ8TF42 649 aa5.17□□□□□ -1.58
LINC00428-201ENST00000415620 FOXD4L4Q8WXT5 416 aaPredicted RBP5.17□□□□□ -1.58
LINC00428-201ENST00000415620 OSBPL1AQ9BXW6 950 aa5.17□□□□□ -1.58
LINC00428-201ENST00000415620 PRNPP04156 253 aa5.16□□□□□ -1.58
LINC00428-201ENST00000415620 PTPRAP18433 802 aa5.16□□□□□ -1.58
LINC00428-201ENST00000415620 MAP4P27816 1152 aaKnown RBP5.16□□□□□ -1.58
LINC00428-201ENST00000415620 SCNN1AP37088 669 aa5.16□□□□□ -1.58
LINC00428-201ENST00000415620 OCLNQ16625 522 aa5.16□□□□□ -1.58
LINC00428-201ENST00000415620 TTC39BQ5VTQ0 682 aaPredicted RBP5.16□□□□□ -1.58
LINC00428-201ENST00000415620 CYB5RLQ6IPT4 315 aa5.16□□□□□ -1.58
LINC00428-201ENST00000415620 VSIG10LQ86VR7 867 aa5.16□□□□□ -1.58
LINC00428-201ENST00000415620 FAM200AQ8TCP9 573 aa5.16□□□□□ -1.58
LINC00428-201ENST00000415620 WNT8BQ93098 351 aa5.16□□□□□ -1.58
LINC00428-201ENST00000415620 COL26A1Q96A83 441 aa5.16□□□□□ -1.58
LINC00428-201ENST00000415620 KLHDC7BQ96G42 594 aa5.16□□□□□ -1.58
LINC00428-201ENST00000415620 CALR3Q96L12 384 aaKnown RBP5.16□□□□□ -1.58
LINC00428-201ENST00000415620 SAP130Q9H0E3 1048 aa5.16□□□□□ -1.58
LINC00428-201ENST00000415620 RASSF4Q9H2L5 321 aa5.16□□□□□ -1.58
LINC00428-201ENST00000415620 SH2B1Q9NRF2 756 aaPredicted RBP5.16□□□□□ -1.58
LINC00428-201ENST00000415620 FAM13BQ9NYF5 915 aa5.16□□□□□ -1.58
LINC00428-201ENST00000415620 SCRIBQ14160 1630 aa5.15□□□□□ -1.58
LINC00428-201ENST00000415620 UBAP1LF5GYI3 381 aa5.15□□□□□ -1.59
LINC00428-201ENST00000415620 TNFRSF10BO14763 440 aa5.15□□□□□ -1.59
LINC00428-201ENST00000415620 ADAM11O75078 769 aa5.15□□□□□ -1.59
LINC00428-201ENST00000415620 ITGB5P18084 799 aa5.15□□□□□ -1.59
LINC00428-201ENST00000415620 EPHA1P21709 976 aa5.15□□□□□ -1.59
LINC00428-201ENST00000415620 BRD2P25440 801 aaKnown RBP5.15□□□□□ -1.59
LINC00428-201ENST00000415620 CABP4P57796 275 aa5.15□□□□□ -1.59
LINC00428-201ENST00000415620 MSMPQ1L6U9 139 aa5.15□□□□□ -1.59
LINC00428-201ENST00000415620 SWI5Q1ZZU3 235 aa5.15□□□□□ -1.59
LINC00428-201ENST00000415620 FBXL6Q8N531 539 aa5.15□□□□□ -1.59
LINC00428-201ENST00000415620 PIK3R5Q8WYR1 880 aa5.15□□□□□ -1.59
LINC00428-201ENST00000415620 RUSC1Q9BVN2 902 aa5.15□□□□□ -1.59
LINC00428-201ENST00000415620 PBX4Q9BYU1 374 aa5.15□□□□□ -1.59
LINC00428-201ENST00000415620 ADAM19Q9H013 955 aa5.15□□□□□ -1.59
LINC00428-201ENST00000415620 FNDC3AQ9Y2H6 1198 aaKnown RBP5.15□□□□□ -1.59
LINC00428-201ENST00000415620 ERCC6L2Q5T890 1561 aa5.15□□□□□ -1.59
LINC00428-201ENST00000415620 ARAP1Q96P48 1450 aa5.14□□□□□ -1.59
LINC00428-201ENST00000415620 A6NJR5 290 aa5.14□□□□□ -1.59
LINC00428-201ENST00000415620 F13BP05160 661 aa5.14□□□□□ -1.59
LINC00428-201ENST00000415620 RXRBP28702 533 aa5.14□□□□□ -1.59
LINC00428-201ENST00000415620 PIP4K2BP78356 416 aa5.14□□□□□ -1.59
LINC00428-201ENST00000415620 FAM69CQ0P6D2 419 aa5.14□□□□□ -1.59
LINC00428-201ENST00000415620 C16orf46Q6P387 395 aa5.14□□□□□ -1.59
LINC00428-201ENST00000415620 AGBL5Q8NDL9 886 aa5.14□□□□□ -1.59
LINC00428-201ENST00000415620 METTL22Q9BUU2 404 aaPredicted RBP5.14□□□□□ -1.59
LINC00428-201ENST00000415620 OSGEPQ9NPF4 335 aa5.14□□□□□ -1.59
LINC00428-201ENST00000415620 BSDC1Q9NW68 430 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms