RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 TTC39AQ5SRH9 613 aa13.87□□□□□ -0.19
RFFL-205ENST00000415395 PPP1R9BQ96SB3 815 aa13.87□□□□□ -0.19
RFFL-205ENST00000415395 FOXD4L1Q9NU39 408 aa13.87□□□□□ -0.19
RFFL-205ENST00000415395 TFCP2L1Q9NZI6 479 aa13.87□□□□□ -0.19
RFFL-205ENST00000415395 MYH7P12883 1935 aa13.86□□□□□ -0.19
RFFL-205ENST00000415395 AKAP11Q9UKA4 1901 aa13.86□□□□□ -0.19
RFFL-205ENST00000415395 NPHP1O15259 732 aa13.86□□□□□ -0.19
RFFL-205ENST00000415395 SLC5A1P13866 664 aa13.86□□□□□ -0.19
RFFL-205ENST00000415395 HS1BP3Q53T59 392 aa13.86□□□□□ -0.19
RFFL-205ENST00000415395 KBTBD3Q8NAB2 608 aa13.86□□□□□ -0.19
RFFL-205ENST00000415395 IL17RAQ96F46 866 aa13.86□□□□□ -0.19
RFFL-205ENST00000415395 TAF1P21675 1872 aa13.85□□□□□ -0.19
RFFL-205ENST00000415395 ANAPC15P60006 121 aa13.85□□□□□ -0.19
RFFL-205ENST00000415395 ST5P78524 1137 aa13.85□□□□□ -0.19
RFFL-205ENST00000415395 ZNF827Q17R98 1081 aa13.85□□□□□ -0.19
RFFL-205ENST00000415395 LRRFIP1Q32MZ4 808 aaKnown RBP13.85□□□□□ -0.19
RFFL-205ENST00000415395 KIAA1211Q6ZU35 1233 aa13.85□□□□□ -0.19
RFFL-205ENST00000415395 C3orf67Q6ZVT6 689 aa13.85□□□□□ -0.19
RFFL-205ENST00000415395 UBE2Q2Q8WVN8 375 aa13.85□□□□□ -0.19
RFFL-205ENST00000415395 ANO2Q9NQ90 1003 aa13.85□□□□□ -0.19
RFFL-205ENST00000415395 PAG1Q9NWQ8 432 aa13.85□□□□□ -0.19
RFFL-205ENST00000415395 CYP2E1P05181 493 aaPredicted RBP13.84□□□□□ -0.19
RFFL-205ENST00000415395 TPM2P07951 284 aa13.84□□□□□ -0.19
RFFL-205ENST00000415395 UQCRFS1P1P0C7P4 283 aa13.84□□□□□ -0.19
RFFL-205ENST00000415395 ADORA1P30542 326 aa13.84□□□□□ -0.19
RFFL-205ENST00000415395 CWC27Q6UX04 472 aaKnown RBP13.84□□□□□ -0.19
RFFL-205ENST00000415395 NLGN1Q8N2Q7 840 aa13.84□□□□□ -0.19
RFFL-205ENST00000415395 DNAJC2Q99543 621 aaKnown RBP13.84□□□□□ -0.19
RFFL-205ENST00000415395 SERPINB2P05120 415 aa13.84□□□□□ -0.19
RFFL-205ENST00000415395 ARID4AP29374 1257 aaPredicted RBP13.84□□□□□ -0.19
RFFL-205ENST00000415395 CHRNDQ07001 517 aa13.84□□□□□ -0.19
RFFL-205ENST00000415395 MCTP1Q6DN14 999 aa13.84□□□□□ -0.19
RFFL-205ENST00000415395 PRR5LQ6MZQ0 368 aa13.84□□□□□ -0.19
RFFL-205ENST00000415395 DDX46Q7L014 1031 aaKnown RBP13.84□□□□□ -0.19
RFFL-205ENST00000415395 COL4A1P02462 1669 aa13.83□□□□□ -0.19
RFFL-205ENST00000415395 MED23Q9ULK4 1368 aa13.83□□□□□ -0.2
RFFL-205ENST00000415395 MBD3O95983 291 aa13.83□□□□□ -0.2
RFFL-205ENST00000415395 MSNP26038 577 aaKnown RBP13.83□□□□□ -0.2
RFFL-205ENST00000415395 RPS8P62241 208 aaKnown RBP13.83□□□□□ -0.2
RFFL-205ENST00000415395 UBE4AQ14139 1066 aa13.83□□□□□ -0.2
RFFL-205ENST00000415395 ZSCAN30Q86W11 494 aa13.83□□□□□ -0.2
RFFL-205ENST00000415395 GAS2L3Q86XJ1 694 aa13.83□□□□□ -0.2
RFFL-205ENST00000415395 CAMKK2Q96RR4 588 aa13.83□□□□□ -0.2
RFFL-205ENST00000415395 LSG1Q9H089 658 aaKnown RBP13.83□□□□□ -0.2
RFFL-205ENST00000415395 POLRMTO00411 1230 aaKnown RBP13.82□□□□□ -0.2
RFFL-205ENST00000415395 NMIQ13287 307 aaPredicted RBP13.82□□□□□ -0.2
RFFL-205ENST00000415395 TTF1Q15361 905 aaPredicted RBP13.82□□□□□ -0.2
RFFL-205ENST00000415395 CRY2Q49AN0 593 aa13.82□□□□□ -0.2
RFFL-205ENST00000415395 COL23A1Q86Y22 540 aaPredicted RBP13.82□□□□□ -0.2
RFFL-205ENST00000415395 ANKRD2Q9GZV1 360 aa13.82□□□□□ -0.2
RFFL-205ENST00000415395 DOCK2Q92608 1830 aa13.82□□□□□ -0.2
RFFL-205ENST00000415395 GOLIM4O00461 696 aa13.81□□□□□ -0.2
RFFL-205ENST00000415395 ZFYP08048 801 aaPredicted RBP13.81□□□□□ -0.2
RFFL-205ENST00000415395 HSPA4P34932 840 aa13.81□□□□□ -0.2
RFFL-205ENST00000415395 CCDC102BQ68D86 513 aa13.81□□□□□ -0.2
RFFL-205ENST00000415395 IL25Q9H293 177 aa13.81□□□□□ -0.2
RFFL-205ENST00000415395 MINPP1Q9UNW1 487 aa13.81□□□□□ -0.2
RFFL-205ENST00000415395 ZBTB22O15209 634 aa13.81□□□□□ -0.2
RFFL-205ENST00000415395 RRP9O43818 475 aaKnown RBP13.81□□□□□ -0.2
RFFL-205ENST00000415395 GRAPQ13588 217 aa13.81□□□□□ -0.2
RFFL-205ENST00000415395 HELBQ8NG08 1087 aaPredicted RBP13.81□□□□□ -0.2
RFFL-205ENST00000415395 GRAPLQ8TC17 118 aaPredicted RBP13.81□□□□□ -0.2
RFFL-205ENST00000415395 CELF1Q92879 486 aaKnown RBP13.81□□□□□ -0.2
RFFL-205ENST00000415395 EDC3Q96F86 508 aaKnown RBP13.81□□□□□ -0.2
RFFL-205ENST00000415395 HELLSQ9NRZ9 838 aa13.81□□□□□ -0.2
RFFL-205ENST00000415395 CCDC171Q6TFL3 1326 aa13.81□□□□□ -0.2
RFFL-205ENST00000415395 PNPLA7Q6ZV29 1317 aa13.81□□□□□ -0.2
RFFL-205ENST00000415395 ANKRD31Q8N7Z5 1873 aa13.8□□□□□ -0.2
RFFL-205ENST00000415395 A0A0D9SFI3 127 aa13.8□□□□□ -0.2
RFFL-205ENST00000415395 KLRG2A4D1S0 409 aaPredicted RBP13.8□□□□□ -0.2
RFFL-205ENST00000415395 NCLP19338 710 aaKnown RBP13.8□□□□□ -0.2
RFFL-205ENST00000415395 BAG6P46379 1132 aa13.8□□□□□ -0.2
RFFL-205ENST00000415395 DDR1Q08345 913 aa13.8□□□□□ -0.2
RFFL-205ENST00000415395 SF3B2Q13435 895 aaKnown RBP13.8□□□□□ -0.2
RFFL-205ENST00000415395 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.8□□□□□ -0.2
RFFL-205ENST00000415395 SYAP1Q96A49 352 aaPredicted RBP13.8□□□□□ -0.2
RFFL-205ENST00000415395 FAM227BQ96M60 508 aa13.8□□□□□ -0.2
RFFL-205ENST00000415395 LMBRD1Q9NUN5 540 aa13.8□□□□□ -0.2
RFFL-205ENST00000415395 TAF5LO75529 589 aa13.79□□□□□ -0.2
RFFL-205ENST00000415395 MCAMP43121 646 aa13.79□□□□□ -0.2
RFFL-205ENST00000415395 FKBP4Q02790 459 aaKnown RBP eCLIP13.79□□□□□ -0.2
RFFL-205ENST00000415395 MCMDC2Q4G0Z9 681 aa13.79□□□□□ -0.2
RFFL-205ENST00000415395 ZSCAN25Q6NSZ9 544 aa13.79□□□□□ -0.2
RFFL-205ENST00000415395 STK32BQ9NY57 414 aa13.79□□□□□ -0.2
RFFL-205ENST00000415395 MYH13Q9UKX3 1938 aa13.79□□□□□ -0.2
RFFL-205ENST00000415395 RNF113AO15541 343 aaKnown RBP13.78□□□□□ -0.2
RFFL-205ENST00000415395 PHKA1P46020 1223 aa13.78□□□□□ -0.2
RFFL-205ENST00000415395 TERF1P54274 439 aa13.78□□□□□ -0.2
RFFL-205ENST00000415395 EZH2Q15910 746 aaKnown RBP13.78□□□□□ -0.2
RFFL-205ENST00000415395 SLC15A2Q16348 729 aa13.78□□□□□ -0.2
RFFL-205ENST00000415395 ZSCAN23Q3MJ62 389 aa13.78□□□□□ -0.2
RFFL-205ENST00000415395 ZMYM1Q5SVZ6 1142 aa13.78□□□□□ -0.2
RFFL-205ENST00000415395 CAVIN1Q6NZI2 390 aaKnown RBP13.78□□□□□ -0.2
RFFL-205ENST00000415395 RPGRQ92834 1020 aaKnown RBP13.78□□□□□ -0.2
RFFL-205ENST00000415395 MAP4K1Q92918 833 aa13.78□□□□□ -0.2
RFFL-205ENST00000415395 INTS4Q96HW7 963 aaKnown RBP13.78□□□□□ -0.2
RFFL-205ENST00000415395 RBM17Q96I25 401 aaKnown RBP13.78□□□□□ -0.2
RFFL-205ENST00000415395 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.78□□□□□ -0.2
RFFL-205ENST00000415395 NDUFB9Q9Y6M9 179 aa13.78□□□□□ -0.2
RFFL-205ENST00000415395 ZNF804BA4D1E1 1349 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms