RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 JMYQ8N9B5 988 aa16.07■□□□□ 0.16
SSR4P1-201ENST00000415143 ANP32BQ92688 251 aaKnown RBP16.07■□□□□ 0.16
SSR4P1-201ENST00000415143 LMBRD1Q9NUN5 540 aa16.07■□□□□ 0.16
SSR4P1-201ENST00000415143 CD2APQ9Y5K6 639 aa16.07■□□□□ 0.16
SSR4P1-201ENST00000415143 ZNF609O15014 1411 aa16.06■□□□□ 0.16
SSR4P1-201ENST00000415143 A0A1B0GUL7 405 aa16.06■□□□□ 0.16
SSR4P1-201ENST00000415143 PDE8AO60658 829 aa16.06■□□□□ 0.16
SSR4P1-201ENST00000415143 PRIM1P49642 420 aaKnown RBP16.06■□□□□ 0.16
SSR4P1-201ENST00000415143 DZIP3Q86Y13 1208 aaKnown RBP16.06■□□□□ 0.16
SSR4P1-201ENST00000415143 DSCC1Q9BVC3 393 aa16.06■□□□□ 0.16
SSR4P1-201ENST00000415143 ZDHHC9Q9Y397 364 aa16.06■□□□□ 0.16
SSR4P1-201ENST00000415143 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.06■□□□□ 0.16
SSR4P1-201ENST00000415143 SPEF2Q9C093 1822 aa16.05■□□□□ 0.16
SSR4P1-201ENST00000415143 TJP1Q07157 1748 aa16.05■□□□□ 0.16
SSR4P1-201ENST00000415143 RPAP1Q9BWH6 1393 aaPredicted RBP16.05■□□□□ 0.16
SSR4P1-201ENST00000415143 RNF113AO15541 343 aaKnown RBP16.05■□□□□ 0.16
SSR4P1-201ENST00000415143 PRPF40AO75400 957 aaKnown RBP16.05■□□□□ 0.16
SSR4P1-201ENST00000415143 RPS6KB1P23443 525 aa16.05■□□□□ 0.16
SSR4P1-201ENST00000415143 COL23A1Q86Y22 540 aaPredicted RBP16.05■□□□□ 0.16
SSR4P1-201ENST00000415143 TRMT112Q9UI30 125 aaKnown RBP16.05■□□□□ 0.16
SSR4P1-201ENST00000415143 CTNNA3Q9UI47 895 aa16.05■□□□□ 0.16
SSR4P1-201ENST00000415143 GOLIM4O00461 696 aa16.04■□□□□ 0.16
SSR4P1-201ENST00000415143 CTSWP56202 376 aa16.04■□□□□ 0.16
SSR4P1-201ENST00000415143 TIMM10P62072 90 aa16.04■□□□□ 0.16
SSR4P1-201ENST00000415143 LRRC24Q50LG9 513 aa16.04■□□□□ 0.16
SSR4P1-201ENST00000415143 PARP10Q53GL7 1025 aa16.04■□□□□ 0.16
SSR4P1-201ENST00000415143 FAM89AQ96GI7 184 aa16.04■□□□□ 0.16
SSR4P1-201ENST00000415143 GRPEL1Q9HAV7 217 aa16.04■□□□□ 0.16
SSR4P1-201ENST00000415143 CCDC87Q9NVE4 849 aa16.04■□□□□ 0.16
SSR4P1-201ENST00000415143 LY75O60449 1722 aa16.03■□□□□ 0.16
SSR4P1-201ENST00000415143 IRS4O14654 1257 aaPredicted RBP16.03■□□□□ 0.16
SSR4P1-201ENST00000415143 STX6O43752 255 aa16.03■□□□□ 0.16
SSR4P1-201ENST00000415143 PHF14O94880 888 aa16.03■□□□□ 0.16
SSR4P1-201ENST00000415143 ZSCAN22P10073 491 aaPredicted RBP16.03■□□□□ 0.16
SSR4P1-201ENST00000415143 TTF1Q15361 905 aaPredicted RBP16.03■□□□□ 0.16
SSR4P1-201ENST00000415143 METTL24Q5JXM2 366 aa16.03■□□□□ 0.16
SSR4P1-201ENST00000415143 ZMYM1Q5SVZ6 1142 aa16.03■□□□□ 0.16
SSR4P1-201ENST00000415143 DDX46Q7L014 1031 aaKnown RBP16.03■□□□□ 0.16
SSR4P1-201ENST00000415143 ZNF594Q96JF6 807 aaPredicted RBP16.03■□□□□ 0.16
SSR4P1-201ENST00000415143 ZNF512BQ96KM6 892 aaPredicted RBP16.03■□□□□ 0.16
SSR4P1-201ENST00000415143 NEK1Q96PY6 1258 aa16.03■□□□□ 0.16
SSR4P1-201ENST00000415143 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.03■□□□□ 0.16
SSR4P1-201ENST00000415143 UQCRFS1P1P0C7P4 283 aa16.02■□□□□ 0.16
SSR4P1-201ENST00000415143 ZNF445P59923 1031 aa16.02■□□□□ 0.16
SSR4P1-201ENST00000415143 PKP1Q13835 747 aa16.02■□□□□ 0.16
SSR4P1-201ENST00000415143 ATP2B3Q16720 1220 aa16.02■□□□□ 0.16
SSR4P1-201ENST00000415143 ADCK5Q3MIX3 580 aa16.02■□□□□ 0.16
SSR4P1-201ENST00000415143 LDHAL6AQ6ZMR3 332 aa16.02■□□□□ 0.16
SSR4P1-201ENST00000415143 ZNF34Q8IZ26 560 aa16.02■□□□□ 0.16
SSR4P1-201ENST00000415143 TTLL11Q8NHH1 800 aa16.02■□□□□ 0.16
SSR4P1-201ENST00000415143 XAGE2Q96GT9 111 aa16.02■□□□□ 0.16
SSR4P1-201ENST00000415143 CNNM1Q9NRU3 951 aa16.02■□□□□ 0.16
SSR4P1-201ENST00000415143 ZNF652Q9Y2D9 606 aa16.02■□□□□ 0.16
SSR4P1-201ENST00000415143 ZBTB1Q9Y2K1 713 aa16.02■□□□□ 0.16
SSR4P1-201ENST00000415143 KIF3AQ9Y496 699 aa16.02■□□□□ 0.16
SSR4P1-201ENST00000415143 RGL2O15211 777 aa16.01■□□□□ 0.15
SSR4P1-201ENST00000415143 ITGA6P23229 1130 aa16.01■□□□□ 0.15
SSR4P1-201ENST00000415143 ATP6V1AP38606 617 aa16.01■□□□□ 0.15
SSR4P1-201ENST00000415143 CCDC83Q8IWF9 413 aa16.01■□□□□ 0.15
SSR4P1-201ENST00000415143 MROH5Q6ZUA9 1318 aa16■□□□□ 0.15
SSR4P1-201ENST00000415143 LETM1O95202 739 aaPredicted RBP16■□□□□ 0.15
SSR4P1-201ENST00000415143 XRCC6P12956 609 aaKnown RBP eCLIP16■□□□□ 0.15
SSR4P1-201ENST00000415143 GPTP24298 496 aa16■□□□□ 0.15
SSR4P1-201ENST00000415143 GJB2P29033 226 aa16■□□□□ 0.15
SSR4P1-201ENST00000415143 EIF5P55010 431 aaKnown RBP16■□□□□ 0.15
SSR4P1-201ENST00000415143 FGD1P98174 961 aa16■□□□□ 0.15
SSR4P1-201ENST00000415143 HLFQ16534 295 aa16■□□□□ 0.15
SSR4P1-201ENST00000415143 ZNF589Q86UQ0 364 aaPredicted RBP16■□□□□ 0.15
SSR4P1-201ENST00000415143 UTP14AQ9BVJ6 771 aaKnown RBP16■□□□□ 0.15
SSR4P1-201ENST00000415143 PUS3Q9BZE2 481 aaKnown RBP16■□□□□ 0.15
SSR4P1-201ENST00000415143 NMRK2Q9NPI5 230 aa16■□□□□ 0.15
SSR4P1-201ENST00000415143 SYT1P21579 422 aa15.99■□□□□ 0.15
SSR4P1-201ENST00000415143 TMEM87AQ8NBN3 555 aa15.99■□□□□ 0.15
SSR4P1-201ENST00000415143 EDC3Q96F86 508 aaKnown RBP15.99■□□□□ 0.15
SSR4P1-201ENST00000415143 RIPOR2Q9Y4F9 1068 aa15.99■□□□□ 0.15
SSR4P1-201ENST00000415143 LOC102724428A0A0B4J2F2 783 aa15.98■□□□□ 0.15
SSR4P1-201ENST00000415143 F13A1P00488 732 aa15.98■□□□□ 0.15
SSR4P1-201ENST00000415143 SIK1P57059 783 aa15.98■□□□□ 0.15
SSR4P1-201ENST00000415143 FKBP4Q02790 459 aaKnown RBP eCLIP15.98■□□□□ 0.15
SSR4P1-201ENST00000415143 CAVIN1Q6NZI2 390 aaKnown RBP15.98■□□□□ 0.15
SSR4P1-201ENST00000415143 SLC4A9Q96Q91 983 aa15.98■□□□□ 0.15
SSR4P1-201ENST00000415143 CCNL1Q9UK58 526 aaPredicted RBP15.98■□□□□ 0.15
SSR4P1-201ENST00000415143 CPA1P15085 419 aa15.97■□□□□ 0.15
SSR4P1-201ENST00000415143 ME3Q16798 604 aa15.97■□□□□ 0.15
SSR4P1-201ENST00000415143 FOXD4L5Q5VV16 416 aaPredicted RBP15.97■□□□□ 0.15
SSR4P1-201ENST00000415143 LARP1BQ659C4 914 aaKnown RBP15.97■□□□□ 0.15
SSR4P1-201ENST00000415143 DHX32Q7L7V1 743 aaKnown RBP15.97■□□□□ 0.15
SSR4P1-201ENST00000415143 RBM46Q8TBY0 533 aaKnown RBP15.97■□□□□ 0.15
SSR4P1-201ENST00000415143 FOXD4L4Q8WXT5 416 aaPredicted RBP15.97■□□□□ 0.15
SSR4P1-201ENST00000415143 LLPHQ9BRT6 129 aaKnown RBP15.97■□□□□ 0.15
SSR4P1-201ENST00000415143 BRPF3Q9ULD4 1205 aa15.97■□□□□ 0.15
SSR4P1-201ENST00000415143 TPCN1Q9ULQ1 816 aa15.97■□□□□ 0.15
SSR4P1-201ENST00000415143 TBC1D2BQ9UPU7 963 aa15.97■□□□□ 0.15
SSR4P1-201ENST00000415143 ANKRD36CQ5JPF3 1778 aa15.97■□□□□ 0.15
SSR4P1-201ENST00000415143 CICQ96RK0 1608 aaPredicted RBP15.97■□□□□ 0.15
SSR4P1-201ENST00000415143 PDE8BO95263 885 aa15.96■□□□□ 0.15
SSR4P1-201ENST00000415143 SLC5A1P13866 664 aa15.96■□□□□ 0.15
SSR4P1-201ENST00000415143 CRKLP46109 303 aaKnown RBP15.96■□□□□ 0.15
SSR4P1-201ENST00000415143 PUM3Q15397 648 aaKnown RBP15.96■□□□□ 0.15
SSR4P1-201ENST00000415143 IMMTQ16891 758 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms