RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 MED23Q9ULK4 1368 aa16.33■□□□□ 0.2
CNN3-203ENST00000415017 C21orf2O43822 256 aa16.32■□□□□ 0.2
CNN3-203ENST00000415017 ADORA1P30542 326 aa16.32■□□□□ 0.2
CNN3-203ENST00000415017 TTC41PQ6P2S7 1318 aa16.32■□□□□ 0.2
CNN3-203ENST00000415017 FBXO33Q7Z6M2 555 aa16.32■□□□□ 0.2
CNN3-203ENST00000415017 XAGE2Q96GT9 111 aa16.32■□□□□ 0.2
CNN3-203ENST00000415017 DBNDD2Q9BQY9 259 aa16.32■□□□□ 0.2
CNN3-203ENST00000415017 CCDC8Q9H0W5 538 aaPredicted RBP16.32■□□□□ 0.2
CNN3-203ENST00000415017 NSFL1CQ9UNZ2 370 aaKnown RBP16.32■□□□□ 0.2
CNN3-203ENST00000415017 DICER1Q9UPY3 1922 aaKnown RBP16.32■□□□□ 0.2
CNN3-203ENST00000415017 CCDC88AQ3V6T2 1871 aa16.31■□□□□ 0.2
CNN3-203ENST00000415017 LTBP3Q9NS15 1303 aa16.31■□□□□ 0.2
CNN3-203ENST00000415017 SLC5A1P13866 664 aa16.31■□□□□ 0.2
CNN3-203ENST00000415017 PDE1AP54750 535 aa16.31■□□□□ 0.2
CNN3-203ENST00000415017 CCDC93Q567U6 631 aa16.31■□□□□ 0.2
CNN3-203ENST00000415017 TXNRD3Q86VQ6 643 aa16.31■□□□□ 0.2
CNN3-203ENST00000415017 SKAP1Q86WV1 359 aa16.31■□□□□ 0.2
CNN3-203ENST00000415017 RTKN2Q8IZC4 609 aa16.31■□□□□ 0.2
CNN3-203ENST00000415017 PI4K2BQ8TCG2 481 aa16.31■□□□□ 0.2
CNN3-203ENST00000415017 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.31■□□□□ 0.2
CNN3-203ENST00000415017 FAM84BQ96KN1 310 aaPredicted RBP16.31■□□□□ 0.2
CNN3-203ENST00000415017 VPS33BQ9H267 617 aa16.31■□□□□ 0.2
CNN3-203ENST00000415017 ANKIB1Q9P2G1 1089 aa16.31■□□□□ 0.2
CNN3-203ENST00000415017 GGA1Q9UJY5 639 aa16.31■□□□□ 0.2
CNN3-203ENST00000415017 IFIT2P09913 472 aaKnown RBP16.3■□□□□ 0.2
CNN3-203ENST00000415017 IFIT1P09914 478 aaKnown RBP16.3■□□□□ 0.2
CNN3-203ENST00000415017 ATP5JP18859 108 aa16.3■□□□□ 0.2
CNN3-203ENST00000415017 MX1P20591 662 aa16.3■□□□□ 0.2
CNN3-203ENST00000415017 KLRK1P26718 216 aa16.3■□□□□ 0.2
CNN3-203ENST00000415017 ARID4AP29374 1257 aaPredicted RBP16.3■□□□□ 0.2
CNN3-203ENST00000415017 DPP8Q6V1X1 898 aaPredicted RBP16.3■□□□□ 0.2
CNN3-203ENST00000415017 ECHDC1Q9NTX5 307 aa16.3■□□□□ 0.2
CNN3-203ENST00000415017 DOCK2Q92608 1830 aa16.29■□□□□ 0.2
CNN3-203ENST00000415017 KLHL34Q8N239 644 aa16.29■□□□□ 0.2
CNN3-203ENST00000415017 ZBTB47Q9UFB7 747 aaPredicted RBP16.29■□□□□ 0.2
CNN3-203ENST00000415017 SCN9AQ15858 1988 aa16.29■□□□□ 0.2
CNN3-203ENST00000415017 AK9Q5TCS8 1911 aa16.29■□□□□ 0.2
CNN3-203ENST00000415017 MYO5AQ9Y4I1 1855 aaKnown RBP16.29■□□□□ 0.2
CNN3-203ENST00000415017 UFL1O94874 794 aa16.28■□□□□ 0.2
CNN3-203ENST00000415017 FKBP4Q02790 459 aaKnown RBP eCLIP16.28■□□□□ 0.2
CNN3-203ENST00000415017 CCDC102BQ68D86 513 aa16.28■□□□□ 0.2
CNN3-203ENST00000415017 NEUROD6Q96NK8 337 aa16.28■□□□□ 0.2
CNN3-203ENST00000415017 TMX4Q9H1E5 349 aaPredicted RBP16.28■□□□□ 0.2
CNN3-203ENST00000415017 COL4A5P29400 1685 aa16.27■□□□□ 0.2
CNN3-203ENST00000415017 PDS5AQ29RF7 1337 aaKnown RBP16.27■□□□□ 0.2
CNN3-203ENST00000415017 NFKBIEO00221 500 aa16.27■□□□□ 0.2
CNN3-203ENST00000415017 PHKA1P46020 1223 aa16.27■□□□□ 0.2
CNN3-203ENST00000415017 KIAA2012Q0VF49 1180 aa16.27■□□□□ 0.2
CNN3-203ENST00000415017 SUPT20HQ8NEM7 779 aa16.27■□□□□ 0.2
CNN3-203ENST00000415017 BCS1LQ9Y276 419 aa16.27■□□□□ 0.2
CNN3-203ENST00000415017 MYH7P12883 1935 aa16.26■□□□□ 0.19
CNN3-203ENST00000415017 SEMA3EO15041 775 aa16.26■□□□□ 0.19
CNN3-203ENST00000415017 IL1R1P14778 569 aa16.26■□□□□ 0.19
CNN3-203ENST00000415017 GYG1P46976 350 aa16.26■□□□□ 0.19
CNN3-203ENST00000415017 KCNJ4P48050 445 aa16.26■□□□□ 0.19
CNN3-203ENST00000415017 BCAMP50895 628 aa16.26■□□□□ 0.19
CNN3-203ENST00000415017 TDRD7Q8NHU6 1098 aaKnown RBP16.26■□□□□ 0.19
CNN3-203ENST00000415017 COL1A1P02452 1464 aaPredicted RBP16.25■□□□□ 0.19
CNN3-203ENST00000415017 C6orf229H3BNL8 230 aa16.25■□□□□ 0.19
CNN3-203ENST00000415017 GLRX3O76003 335 aaKnown RBP16.25■□□□□ 0.19
CNN3-203ENST00000415017 YBX3P16989 372 aaKnown RBP eCLIP16.25■□□□□ 0.19
CNN3-203ENST00000415017 HIBADHP31937 336 aaKnown RBP16.25■□□□□ 0.19
CNN3-203ENST00000415017 CCDC158Q5M9N0 1113 aa16.25■□□□□ 0.19
CNN3-203ENST00000415017 TTC22Q5TAA0 569 aa16.25■□□□□ 0.19
CNN3-203ENST00000415017 GPR101Q96P66 508 aaPredicted RBP16.25■□□□□ 0.19
CNN3-203ENST00000415017 EYA3Q99504 573 aa16.25■□□□□ 0.19
CNN3-203ENST00000415017 ZNF219Q9P2Y4 722 aaPredicted RBP16.25■□□□□ 0.19
CNN3-203ENST00000415017 ERC2O15083 957 aa16.24■□□□□ 0.19
CNN3-203ENST00000415017 UQCRFS1P1P0C7P4 283 aa16.24■□□□□ 0.19
CNN3-203ENST00000415017 GSPT1P15170 499 aaKnown RBP16.24■□□□□ 0.19
CNN3-203ENST00000415017 MCAMP43121 646 aa16.24■□□□□ 0.19
CNN3-203ENST00000415017 PRELPP51888 382 aa16.24■□□□□ 0.19
CNN3-203ENST00000415017 SCARF1Q14162 830 aa16.24■□□□□ 0.19
CNN3-203ENST00000415017 WASHC4Q2M389 1173 aa16.24■□□□□ 0.19
CNN3-203ENST00000415017 CAVIN4Q5BKX8 364 aa16.24■□□□□ 0.19
CNN3-203ENST00000415017 GPATCH3Q96I76 525 aa16.24■□□□□ 0.19
CNN3-203ENST00000415017 HAUS7Q99871 368 aa16.24■□□□□ 0.19
CNN3-203ENST00000415017 ZC3H12CQ9C0D7 883 aaKnown RBP16.24■□□□□ 0.19
CNN3-203ENST00000415017 COA1Q9GZY4 146 aa16.24■□□□□ 0.19
CNN3-203ENST00000415017 CD209Q9NNX6 404 aa16.24■□□□□ 0.19
CNN3-203ENST00000415017 RASGRF1Q13972 1273 aa16.23■□□□□ 0.19
CNN3-203ENST00000415017 BMP2KLQ5H9B9 411 aa16.23■□□□□ 0.19
CNN3-203ENST00000415017 TSHZ3Q63HK5 1081 aa16.23■□□□□ 0.19
CNN3-203ENST00000415017 ZNF804AQ7Z570 1209 aa16.23■□□□□ 0.19
CNN3-203ENST00000415017 TICAM2Q86XR7 235 aa16.23■□□□□ 0.19
CNN3-203ENST00000415017 TAOK3Q9H2K8 898 aa16.23■□□□□ 0.19
CNN3-203ENST00000415017 HMG20BQ9P0W2 317 aa16.23■□□□□ 0.19
CNN3-203ENST00000415017 FAM205AQ6ZU69 1335 aa16.22■□□□□ 0.19
CNN3-203ENST00000415017 RGS3P49796 1198 aa16.22■□□□□ 0.19
CNN3-203ENST00000415017 TTC39AQ5SRH9 613 aa16.22■□□□□ 0.19
CNN3-203ENST00000415017 GORABQ5T7V8 394 aa16.22■□□□□ 0.19
CNN3-203ENST00000415017 PODNQ7Z5L7 613 aa16.22■□□□□ 0.19
CNN3-203ENST00000415017 GNL3LQ9NVN8 582 aaKnown RBP16.22■□□□□ 0.19
CNN3-203ENST00000415017 IARSP41252 1262 aaKnown RBP16.21■□□□□ 0.19
CNN3-203ENST00000415017 SPATA5Q8NB90 893 aa16.21■□□□□ 0.19
CNN3-203ENST00000415017 WWC3Q9ULE0 1092 aa16.21■□□□□ 0.19
CNN3-203ENST00000415017 SALL1Q9NSC2 1324 aa16.2■□□□□ 0.18
CNN3-203ENST00000415017 UTRNP46939 3433 aa16.2■□□□□ 0.18
CNN3-203ENST00000415017 IGSF3O75054 1194 aa16.2■□□□□ 0.18
CNN3-203ENST00000415017 AOC3Q16853 763 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms