RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 OSBPL3Q9H4L5 887 aa3.51□□□□□ -1.85
MCF2-204ENST00000414978 NLRP2Q9NX02 1062 aa3.51□□□□□ -1.85
MCF2-204ENST00000414978 RALGAPBQ86X10 1494 aa3.51□□□□□ -1.85
MCF2-204ENST00000414978 ADGRB2O60241 1585 aa3.51□□□□□ -1.85
MCF2-204ENST00000414978 PDE6BP35913 854 aa3.51□□□□□ -1.85
MCF2-204ENST00000414978 ANAPC15P60006 121 aa3.51□□□□□ -1.85
MCF2-204ENST00000414978 DAB2P98082 770 aa3.51□□□□□ -1.85
MCF2-204ENST00000414978 PAK2Q13177 524 aa3.51□□□□□ -1.85
MCF2-204ENST00000414978 CNKSR1Q969H4 720 aa3.51□□□□□ -1.85
MCF2-204ENST00000414978 AGBL1Q96MI9 1066 aa3.51□□□□□ -1.85
MCF2-204ENST00000414978 ARHGAP35Q9NRY4 1499 aa3.51□□□□□ -1.85
MCF2-204ENST00000414978 MBD5Q9P267 1494 aa3.51□□□□□ -1.85
MCF2-204ENST00000414978 QSER1Q2KHR3 1735 aa3.51□□□□□ -1.85
MCF2-204ENST00000414978 ASXL1Q8IXJ9 1541 aa3.51□□□□□ -1.85
MCF2-204ENST00000414978 DHX29Q7Z478 1369 aaKnown RBP3.51□□□□□ -1.85
MCF2-204ENST00000414978 GNA15P30679 374 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 HS2ST1Q7LGA3 356 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 TMC4Q7Z404 712 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 SH3RF1Q7Z6J0 888 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 FILIP1Q7Z7B0 1213 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 SMC5Q8IY18 1101 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 HSH2DQ96JZ2 352 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 NPHS2Q9NP85 383 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 TSR3Q9UJK0 312 aaKnown RBP3.5□□□□□ -1.85
MCF2-204ENST00000414978 DDX41Q9UJV9 622 aaKnown RBP3.5□□□□□ -1.85
MCF2-204ENST00000414978 CASKIN1Q8WXD9 1431 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 SOWAHBA6NEL2 793 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 FAM86C2PA6NEL3 165 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 ZBTB24O43167 697 aaPredicted RBP3.5□□□□□ -1.85
MCF2-204ENST00000414978 KCNQ2O43526 872 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 CHMP4BP1P59074 171 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 SEPT6Q14141 434 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 ALDH16A1Q8IZ83 802 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 CMTR1Q8N1G2 835 aaKnown RBP3.5□□□□□ -1.85
MCF2-204ENST00000414978 THEMISQ8N1K5 641 aaPredicted RBP3.5□□□□□ -1.85
MCF2-204ENST00000414978 SP7Q8TDD2 431 aaPredicted RBP3.5□□□□□ -1.85
MCF2-204ENST00000414978 PRR14Q9BWN1 585 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 TRIM55Q9BYV6 548 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 GGNBP2Q9H3C7 697 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 C12orf49Q9H741 205 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 GPSM3Q9Y4H4 160 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 PTPROQ16827 1216 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 TREML1Q86YW5 311 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 JMYQ8N9B5 988 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 L3MBTL2Q969R5 705 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 RNPC3Q96LT9 517 aaKnown RBP3.5□□□□□ -1.85
MCF2-204ENST00000414978 PCDH12Q9NPG4 1184 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 KBTBD4Q9NVX7 518 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 GABBR1Q9UBS5 961 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 PLCH1Q4KWH8 1693 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 PIK3R4Q99570 1358 aa3.5□□□□□ -1.85
MCF2-204ENST00000414978 POTECB2RU33 542 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 GADD45BO75293 160 aaPredicted RBP3.49□□□□□ -1.85
MCF2-204ENST00000414978 INHAP05111 366 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 ZNF157P51786 506 aaPredicted RBP3.49□□□□□ -1.85
MCF2-204ENST00000414978 MLECQ14165 292 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 CPLX3Q8WVH0 158 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 FAM129BQ96TA1 746 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 OSBPL7Q9BZF2 842 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 TTF2Q9UNY4 1162 aaKnown RBP3.49□□□□□ -1.85
MCF2-204ENST00000414978 EFR3BQ9Y2G0 817 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 A6NJY4 79 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 ESPNB1AK53 854 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 K7ELQ4 463 aaPredicted RBP3.49□□□□□ -1.85
MCF2-204ENST00000414978 MAFGO15525 162 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 FAM50AQ14320 339 aaKnown RBP3.49□□□□□ -1.85
MCF2-204ENST00000414978 KRT25Q7Z3Z0 450 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 IFT43Q96FT9 208 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 CHPF2Q9P2E5 772 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 KANSL3Q9P2N6 904 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 CHMP3Q9Y3E7 222 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 RPRD2Q5VT52 1461 aaKnown RBP3.49□□□□□ -1.85
MCF2-204ENST00000414978 TRPM2O94759 1503 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 USP32Q8NFA0 1604 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 TRPA1O75762 1119 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 ADD1P35611 737 aaKnown RBP3.49□□□□□ -1.85
MCF2-204ENST00000414978 GJA8P48165 433 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 NASPP49321 788 aaPredicted RBP3.49□□□□□ -1.85
MCF2-204ENST00000414978 PIP4K2BP78356 416 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 CRELD1Q96HD1 420 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 OSBPL2Q9H1P3 480 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 METTL5Q9NRN9 209 aaKnown RBP3.49□□□□□ -1.85
MCF2-204ENST00000414978 THSD7AQ9UPZ6 1657 aa3.49□□□□□ -1.85
MCF2-204ENST00000414978 GLI3P10071 1580 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 BLMP54132 1417 aaPredicted RBP3.48□□□□□ -1.85
MCF2-204ENST00000414978 BACH1O14867 736 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 USP17L7P0C7H9 530 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 IGFBP4P22692 258 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 IGBP1P78318 339 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 MAP3K10Q02779 954 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 HNRNPLLQ8WVV9 542 aaKnown RBP3.48□□□□□ -1.85
MCF2-204ENST00000414978 FAM163AQ96GL9 167 aaPredicted RBP3.48□□□□□ -1.85
MCF2-204ENST00000414978 PHACTR1Q9C0D0 580 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 ZNF408Q9H9D4 720 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 TLR6Q9Y2C9 796 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 AKAP2Q9Y2D5 859 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 MSRB2Q9Y3D2 182 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 TMEM131LA2VDJ0 1609 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 CCDC141Q6ZP82 1450 aa3.48□□□□□ -1.85
MCF2-204ENST00000414978 TLR3O15455 904 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms