RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 SFI1A8K8P3 1242 aa6.54□□□□□ -1.36
VPS41-205ENST00000414632 U2SURPO15042 1029 aaKnown RBP6.54□□□□□ -1.36
VPS41-205ENST00000414632 CYP27B1O15528 508 aa6.54□□□□□ -1.36
VPS41-205ENST00000414632 PPP2R1AP30153 589 aa6.54□□□□□ -1.36
VPS41-205ENST00000414632 IL13P35225 146 aa6.54□□□□□ -1.36
VPS41-205ENST00000414632 C4orf48Q5BLP8 95 aa6.54□□□□□ -1.36
VPS41-205ENST00000414632 SULT6B1Q6IMI4 303 aa6.54□□□□□ -1.36
VPS41-205ENST00000414632 TPCN2Q8NHX9 752 aa6.54□□□□□ -1.36
VPS41-205ENST00000414632 C1orf216Q8TAB5 229 aa6.54□□□□□ -1.36
VPS41-205ENST00000414632 CAMKK2Q96RR4 588 aa6.54□□□□□ -1.36
VPS41-205ENST00000414632 IL21Q9HBE4 155 aa6.54□□□□□ -1.36
VPS41-205ENST00000414632 TAF1LQ8IZX4 1826 aa6.54□□□□□ -1.36
VPS41-205ENST00000414632 DLG5Q8TDM6 1919 aa6.54□□□□□ -1.36
VPS41-205ENST00000414632 PCDH11XQ9BZA7 1347 aa6.53□□□□□ -1.36
VPS41-205ENST00000414632 PCDH11YQ9BZA8 1340 aa6.53□□□□□ -1.36
VPS41-205ENST00000414632 C5P01031 1676 aa6.53□□□□□ -1.36
VPS41-205ENST00000414632 RBM47A0AV96 593 aaKnown RBP6.53□□□□□ -1.36
VPS41-205ENST00000414632 DIAPH1O60610 1272 aaKnown RBP6.53□□□□□ -1.36
VPS41-205ENST00000414632 MARSP56192 900 aaKnown RBP6.53□□□□□ -1.36
VPS41-205ENST00000414632 USP4Q13107 963 aa6.53□□□□□ -1.36
VPS41-205ENST00000414632 OCLNQ16625 522 aa6.53□□□□□ -1.36
VPS41-205ENST00000414632 TAS1R3Q7RTX0 852 aa6.53□□□□□ -1.36
VPS41-205ENST00000414632 NKX2-3Q8TAU0 364 aa6.53□□□□□ -1.36
VPS41-205ENST00000414632 SLC10A4Q96EP9 437 aa6.53□□□□□ -1.36
VPS41-205ENST00000414632 PCDHB11Q9Y5F2 797 aa6.53□□□□□ -1.36
VPS41-205ENST00000414632 BCL9O00512 1426 aa6.52□□□□□ -1.37
VPS41-205ENST00000414632 PAPPAQ13219 1627 aa6.52□□□□□ -1.37
VPS41-205ENST00000414632 ESPNB1AK53 854 aa6.52□□□□□ -1.37
VPS41-205ENST00000414632 S1PR4O95977 384 aa6.52□□□□□ -1.37
VPS41-205ENST00000414632 ERCC3P19447 782 aa6.52□□□□□ -1.37
VPS41-205ENST00000414632 PTPN5P54829 565 aa6.52□□□□□ -1.37
VPS41-205ENST00000414632 KCNQ4P56696 695 aa6.52□□□□□ -1.37
VPS41-205ENST00000414632 R3HDM1Q15032 1099 aaKnown RBP6.52□□□□□ -1.37
VPS41-205ENST00000414632 NBPF20Q3BBV1 942 aa6.52□□□□□ -1.37
VPS41-205ENST00000414632 ZNF530Q6P9A1 599 aaPredicted RBP6.52□□□□□ -1.37
VPS41-205ENST00000414632 MPRIPQ6WCQ1 1025 aa6.52□□□□□ -1.37
VPS41-205ENST00000414632 DNAJC14Q6Y2X3 702 aaPredicted RBP6.52□□□□□ -1.37
VPS41-205ENST00000414632 HINFPQ9BQA5 517 aa6.52□□□□□ -1.37
VPS41-205ENST00000414632 C1QTNF2Q9BXJ5 285 aa6.52□□□□□ -1.37
VPS41-205ENST00000414632 BIN2Q9UBW5 565 aaPredicted RBP6.52□□□□□ -1.37
VPS41-205ENST00000414632 SPG7Q9UQ90 795 aa6.52□□□□□ -1.37
VPS41-205ENST00000414632 FCF1Q9Y324 198 aaKnown RBP6.52□□□□□ -1.37
VPS41-205ENST00000414632 PARD3Q8TEW0 1356 aa6.52□□□□□ -1.37
VPS41-205ENST00000414632 CASZ1Q86V15 1759 aa6.52□□□□□ -1.37
VPS41-205ENST00000414632 UNCXA6NJT0 531 aa6.51□□□□□ -1.37
VPS41-205ENST00000414632 LGR5O75473 907 aa6.51□□□□□ -1.37
VPS41-205ENST00000414632 PHKG2P15735 406 aa6.51□□□□□ -1.37
VPS41-205ENST00000414632 NOM1Q5C9Z4 860 aaKnown RBP6.51□□□□□ -1.37
VPS41-205ENST00000414632 CFAP53Q96M91 514 aa6.51□□□□□ -1.37
VPS41-205ENST00000414632 CXXC1Q9P0U4 656 aaPredicted RBP6.51□□□□□ -1.37
VPS41-205ENST00000414632 KDRP35968 1356 aa6.51□□□□□ -1.37
VPS41-205ENST00000414632 SIPA1L3O60292 1781 aaPredicted RBP6.51□□□□□ -1.37
VPS41-205ENST00000414632 KDM6AO15550 1401 aaPredicted RBP6.5□□□□□ -1.37
VPS41-205ENST00000414632 ABL1P00519 1130 aa6.5□□□□□ -1.37
VPS41-205ENST00000414632 SH3BP2P78314 561 aa6.5□□□□□ -1.37
VPS41-205ENST00000414632 TXNRD1Q16881 649 aa6.5□□□□□ -1.37
VPS41-205ENST00000414632 PLEKHO1Q53GL0 409 aaPredicted RBP6.5□□□□□ -1.37
VPS41-205ENST00000414632 IFNL2Q8IZJ0 200 aa6.5□□□□□ -1.37
VPS41-205ENST00000414632 RNF166Q96A37 237 aaPredicted RBP6.5□□□□□ -1.37
VPS41-205ENST00000414632 QSER1Q2KHR3 1735 aa6.5□□□□□ -1.37
VPS41-205ENST00000414632 SRCAPQ6ZRS2 3230 aa6.5□□□□□ -1.37
VPS41-205ENST00000414632 PLSCR1O15162 318 aa6.49□□□□□ -1.37
VPS41-205ENST00000414632 U2AF1L5P0DN76 240 aaPredicted RBP6.49□□□□□ -1.37
VPS41-205ENST00000414632 RAB15P59190 212 aa6.49□□□□□ -1.37
VPS41-205ENST00000414632 U2AF1Q01081 240 aaKnown RBP eCLIP6.49□□□□□ -1.37
VPS41-205ENST00000414632 MTHFSDQ2M296 383 aaKnown RBP6.49□□□□□ -1.37
VPS41-205ENST00000414632 TRMT44Q8IYL2 757 aaKnown RBP6.49□□□□□ -1.37
VPS41-205ENST00000414632 ANO2Q9NQ90 1003 aa6.49□□□□□ -1.37
VPS41-205ENST00000414632 LRRC4BQ9NT99 713 aa6.49□□□□□ -1.37
VPS41-205ENST00000414632 EGFL7Q9UHF1 273 aa6.49□□□□□ -1.37
VPS41-205ENST00000414632 CDV3Q9UKY7 258 aaKnown RBP6.49□□□□□ -1.37
VPS41-205ENST00000414632 C4BP0C0L5 1744 aa6.49□□□□□ -1.37
VPS41-205ENST00000414632 COL5A3P25940 1745 aaPredicted RBP6.49□□□□□ -1.37
VPS41-205ENST00000414632 TJP1Q07157 1748 aa6.49□□□□□ -1.37
VPS41-205ENST00000414632 ADAMTS7Q9UKP4 1686 aa6.49□□□□□ -1.37
VPS41-205ENST00000414632 PALLDQ8WX93 1383 aa6.48□□□□□ -1.37
VPS41-205ENST00000414632 UBR3Q6ZT12 1888 aa6.48□□□□□ -1.37
VPS41-205ENST00000414632 PRKAR2BP31323 418 aa6.48□□□□□ -1.37
VPS41-205ENST00000414632 ZNF211Q13398 564 aaPredicted RBP6.48□□□□□ -1.37
VPS41-205ENST00000414632 ZNF827Q17R98 1081 aa6.48□□□□□ -1.37
VPS41-205ENST00000414632 AMOTQ4VCS5 1084 aa6.48□□□□□ -1.37
VPS41-205ENST00000414632 C1orf141Q5JVX7 400 aa6.48□□□□□ -1.37
VPS41-205ENST00000414632 TSEN2Q8NCE0 465 aaKnown RBP6.48□□□□□ -1.37
VPS41-205ENST00000414632 PIGBQ92521 554 aa6.48□□□□□ -1.37
VPS41-205ENST00000414632 PHACTR3Q96KR7 559 aa6.48□□□□□ -1.37
VPS41-205ENST00000414632 KCTD15Q96SI1 283 aaPredicted RBP6.48□□□□□ -1.37
VPS41-205ENST00000414632 PDGFDQ9GZP0 370 aaPredicted RBP6.48□□□□□ -1.37
VPS41-205ENST00000414632 TMOD3Q9NYL9 352 aa6.48□□□□□ -1.37
VPS41-205ENST00000414632 SEPT3Q9UH03 358 aa6.48□□□□□ -1.37
VPS41-205ENST00000414632 LRP5O75197 1615 aa6.47□□□□□ -1.37
VPS41-205ENST00000414632 UBR2Q8IWV8 1755 aa6.47□□□□□ -1.37
VPS41-205ENST00000414632 ICMTO60725 284 aa6.47□□□□□ -1.37
VPS41-205ENST00000414632 MYCP01106 439 aaPredicted RBP6.47□□□□□ -1.37
VPS41-205ENST00000414632 WEE1P30291 646 aa6.47□□□□□ -1.37
VPS41-205ENST00000414632 CABP4P57796 275 aa6.47□□□□□ -1.37
VPS41-205ENST00000414632 RALBP1Q15311 655 aa6.47□□□□□ -1.37
VPS41-205ENST00000414632 GTF3C2Q8WUA4 911 aaPredicted RBP6.47□□□□□ -1.37
VPS41-205ENST00000414632 LGR6Q9HBX8 967 aa6.47□□□□□ -1.37
VPS41-205ENST00000414632 STK32BQ9NY57 414 aa6.47□□□□□ -1.37
VPS41-205ENST00000414632 CCNL1Q9UK58 526 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms