RNA–Protein interactions for RNA: ENST00000414461.6

RBFOX2-207, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-207ENST00000414461 UTP14AQ9BVJ6 771 aaKnown RBP9.72□□□□□ -0.85
RBFOX2-207ENST00000414461 BCL2L13Q9BXK5 485 aa9.72□□□□□ -0.85
RBFOX2-207ENST00000414461 TRMT112Q9UI30 125 aaKnown RBP9.72□□□□□ -0.85
RBFOX2-207ENST00000414461 TNRC6CQ9HCJ0 1690 aaKnown RBP9.72□□□□□ -0.85
RBFOX2-207ENST00000414461 PI4KAP2A4QPH2 592 aa9.71□□□□□ -0.85
RBFOX2-207ENST00000414461 BAG4O95429 457 aaKnown RBP9.71□□□□□ -0.85
RBFOX2-207ENST00000414461 HSPA6P17066 643 aa9.71□□□□□ -0.85
RBFOX2-207ENST00000414461 KCNA3P22001 575 aa9.71□□□□□ -0.85
RBFOX2-207ENST00000414461 NUBP1P53384 320 aa9.71□□□□□ -0.85
RBFOX2-207ENST00000414461 PI4KAP1Q8N8J0 262 aa9.71□□□□□ -0.85
RBFOX2-207ENST00000414461 NEXNQ0ZGT2 675 aa9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 KSR2Q6VAB6 950 aa9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 MYRIPQ8NFW9 859 aa9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 F6X3S4 739 aa9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 HCLS1P14317 486 aaPredicted RBP9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 HOXB1P14653 301 aaPredicted RBP9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 ZSCAN20P17040 1043 aaPredicted RBP9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 NUCB1Q02818 461 aa9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 FTSJ3Q8IY81 847 aaKnown RBP9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 ZNF710Q8N1W2 664 aa9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 SYNE4Q8N205 404 aa9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 TTLL6Q8N841 843 aa9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 PDCD7Q8N8D1 485 aaKnown RBP9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 JARID2Q92833 1246 aaPredicted RBP9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 RPGRQ92834 1020 aaKnown RBP9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 FAM89AQ96GI7 184 aa9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 ISCA1Q9BUE6 129 aa9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 METTL22Q9BUU2 404 aaPredicted RBP9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 SMC4Q9NTJ3 1288 aa9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 CACNA1SQ13698 1873 aa9.7□□□□□ -0.86
RBFOX2-207ENST00000414461 DLEC1Q9Y238 1755 aa9.69□□□□□ -0.86
RBFOX2-207ENST00000414461 SH3TC1Q8TE82 1336 aa9.69□□□□□ -0.86
RBFOX2-207ENST00000414461 BRCA1P38398 1863 aaKnown RBP9.69□□□□□ -0.86
RBFOX2-207ENST00000414461 RLBP1P12271 317 aa9.69□□□□□ -0.86
RBFOX2-207ENST00000414461 ZSCAN23Q3MJ62 389 aa9.69□□□□□ -0.86
RBFOX2-207ENST00000414461 ARHGAP27Q6ZUM4 889 aa9.69□□□□□ -0.86
RBFOX2-207ENST00000414461 MASTLQ96GX5 879 aa9.69□□□□□ -0.86
RBFOX2-207ENST00000414461 KIF3CO14782 793 aa9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 IPO8O15397 1037 aaKnown RBP9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 SRGNP10124 158 aa9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 CWF19L2Q2TBE0 894 aaKnown RBP9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 SLC4A10Q6U841 1118 aa9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 DNAAF4Q8WXU2 420 aa9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 SSH1Q8WYL5 1049 aa9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 GCC1Q96CN9 775 aa9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 CWC25Q9NXE8 425 aaPredicted RBP9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 C21orf2O43822 256 aa9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 MBD3O95983 291 aa9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 CYP2E1P05181 493 aaPredicted RBP9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 NPR1P16066 1061 aa9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 KIAA2012Q0VF49 1180 aa9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 MKRN3Q13064 507 aaKnown RBP9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 RABEP1Q15276 862 aa9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 UVSSAQ2YD98 709 aa9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 STYK1Q6J9G0 422 aa9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 PRPF40BQ6NWY9 871 aaKnown RBP9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 LRSAM1Q6UWE0 723 aa9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 MRPL50Q8N5N7 158 aaKnown RBP9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 CNKSR1Q969H4 720 aa9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 NLRP3Q96P20 1036 aa9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 KIF2CQ99661 725 aa9.68□□□□□ -0.86
RBFOX2-207ENST00000414461 IRS4O14654 1257 aaPredicted RBP9.67□□□□□ -0.86
RBFOX2-207ENST00000414461 IGKV5-2P06315 115 aa9.67□□□□□ -0.86
RBFOX2-207ENST00000414461 CCDC191Q8NCU4 936 aa9.67□□□□□ -0.86
RBFOX2-207ENST00000414461 LMBRD1Q9NUN5 540 aa9.67□□□□□ -0.86
RBFOX2-207ENST00000414461 ARFGEF1Q9Y6D6 1849 aa9.66□□□□□ -0.86
RBFOX2-207ENST00000414461 NEURL1BA8MQ27 555 aa9.66□□□□□ -0.86
RBFOX2-207ENST00000414461 RASSF7Q02833 373 aa9.66□□□□□ -0.86
RBFOX2-207ENST00000414461 ZBTB38Q8NAP3 1195 aaPredicted RBP9.66□□□□□ -0.86
RBFOX2-207ENST00000414461 FAM184AQ8NB25 1140 aa9.66□□□□□ -0.86
RBFOX2-207ENST00000414461 RBM17Q96I25 401 aaKnown RBP9.66□□□□□ -0.86
RBFOX2-207ENST00000414461 CCDC85AQ96PX6 553 aaPredicted RBP9.66□□□□□ -0.86
RBFOX2-207ENST00000414461 RIC1Q4ADV7 1423 aa9.66□□□□□ -0.86
RBFOX2-207ENST00000414461 DDX60Q8IY21 1712 aaKnown RBP9.65□□□□□ -0.86
RBFOX2-207ENST00000414461 BRPF1P55201 1214 aaPredicted RBP9.65□□□□□ -0.86
RBFOX2-207ENST00000414461 TRIM28Q13263 835 aaKnown RBP9.65□□□□□ -0.86
RBFOX2-207ENST00000414461 ALDH1L2Q3SY69 923 aa9.65□□□□□ -0.86
RBFOX2-207ENST00000414461 ATF7IPQ6VMQ6 1270 aa9.65□□□□□ -0.86
RBFOX2-207ENST00000414461 UBE3BQ7Z3V4 1068 aa9.65□□□□□ -0.86
RBFOX2-207ENST00000414461 CHD1LQ86WJ1 897 aa9.65□□□□□ -0.86
RBFOX2-207ENST00000414461 SYAP1Q96A49 352 aaPredicted RBP9.65□□□□□ -0.86
RBFOX2-207ENST00000414461 RBSNQ9H1K0 784 aa9.65□□□□□ -0.86
RBFOX2-207ENST00000414461 ZBTB40Q9NUA8 1239 aa9.65□□□□□ -0.86
RBFOX2-207ENST00000414461 CACNA1FO60840 1977 aa9.65□□□□□ -0.86
RBFOX2-207ENST00000414461 LAMB2P55268 1798 aa9.65□□□□□ -0.87
RBFOX2-207ENST00000414461 KLRG2A4D1S0 409 aaPredicted RBP9.65□□□□□ -0.87
RBFOX2-207ENST00000414461 PCCAP05165 728 aaPredicted RBP9.65□□□□□ -0.87
RBFOX2-207ENST00000414461 ALDH1B1P30837 517 aa9.65□□□□□ -0.87
RBFOX2-207ENST00000414461 DOK7Q18PE1 504 aa9.65□□□□□ -0.87
RBFOX2-207ENST00000414461 CRY2Q49AN0 593 aa9.65□□□□□ -0.87
RBFOX2-207ENST00000414461 SLC10A5Q5PT55 438 aa9.65□□□□□ -0.87
RBFOX2-207ENST00000414461 OLFM4Q6UX06 510 aa9.65□□□□□ -0.87
RBFOX2-207ENST00000414461 DDX46Q7L014 1031 aaKnown RBP9.65□□□□□ -0.87
RBFOX2-207ENST00000414461 FEZ1Q99689 392 aa9.65□□□□□ -0.87
RBFOX2-207ENST00000414461 SLX4Q8IY92 1834 aa9.64□□□□□ -0.87
RBFOX2-207ENST00000414461 PPEF1O14829 653 aaPredicted RBP9.64□□□□□ -0.87
RBFOX2-207ENST00000414461 TPM3P06753 285 aa9.64□□□□□ -0.87
RBFOX2-207ENST00000414461 FAM193AP78312 1265 aa9.64□□□□□ -0.87
RBFOX2-207ENST00000414461 GCKRQ14397 625 aa9.64□□□□□ -0.87
RBFOX2-207ENST00000414461 CAVIN1Q6NZI2 390 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms