RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 C1orf53Q5VUE5 145 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 MSL1Q68DK7 614 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 CLEC4GQ6UXB4 293 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 SND1Q7KZF4 910 aaKnown RBP eCLIP4.72□□□□□ -1.652e-6■□□□□ 10
SF3B1-203ENST00000414174 SCG3Q8WXD2 468 aaKnown RBP4.72□□□□□ -1.65
SF3B1-203ENST00000414174 MKL1Q969V6 931 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 EVI5LQ96CN4 794 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 TRIM44Q96DX7 344 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-203ENST00000414174 KCNH4Q9UQ05 1017 aa4.72□□□□□ -1.65
SF3B1-203ENST00000414174 ATAD2Q6PL18 1390 aa4.71□□□□□ -1.66
SF3B1-203ENST00000414174 FAM196BA6NMK8 535 aa4.71□□□□□ -1.66
SF3B1-203ENST00000414174 EIF3JO75822 258 aaKnown RBP4.71□□□□□ -1.66
SF3B1-203ENST00000414174 RGS9O75916 674 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-203ENST00000414174 LMOD1P29536 600 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-203ENST00000414174 RAB44Q7Z6P3 723 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-203ENST00000414174 ALDH16A1Q8IZ83 802 aa4.71□□□□□ -1.66
SF3B1-203ENST00000414174 TMEM130Q8N3G9 435 aa4.71□□□□□ -1.66
SF3B1-203ENST00000414174 STAG2Q8N3U4 1231 aa4.71□□□□□ -1.66
SF3B1-203ENST00000414174 NUDT8Q8WV74 236 aa4.71□□□□□ -1.66
SF3B1-203ENST00000414174 SUSD3Q96L08 255 aa4.71□□□□□ -1.66
SF3B1-203ENST00000414174 METTL14Q9HCE5 456 aaKnown RBP4.71□□□□□ -1.66
SF3B1-203ENST00000414174 JADE2Q9NQC1 790 aa4.71□□□□□ -1.66
SF3B1-203ENST00000414174 ANKIB1Q9P2G1 1089 aa4.71□□□□□ -1.66
SF3B1-203ENST00000414174 BCS1LQ9Y276 419 aa4.71□□□□□ -1.66
SF3B1-203ENST00000414174 CREB3O43889 395 aa4.7□□□□□ -1.66
SF3B1-203ENST00000414174 SETDB1Q15047 1291 aa4.7□□□□□ -1.66
SF3B1-203ENST00000414174 WDR78Q5VTH9 848 aa4.7□□□□□ -1.66
SF3B1-203ENST00000414174 PSAPL1Q6NUJ1 521 aa4.7□□□□□ -1.66
SF3B1-203ENST00000414174 INTS5Q6P9B9 1019 aaKnown RBP4.7□□□□□ -1.66
SF3B1-203ENST00000414174 GIMAP6Q6P9H5 292 aa4.7□□□□□ -1.66
SF3B1-203ENST00000414174 ZNF662Q6ZS27 426 aa4.7□□□□□ -1.66
SF3B1-203ENST00000414174 ANKMY2Q8IV38 441 aa4.7□□□□□ -1.66
SF3B1-203ENST00000414174 ANP32BQ92688 251 aaKnown RBP4.7□□□□□ -1.66
SF3B1-203ENST00000414174 TSPAN18Q96SJ8 248 aa4.7□□□□□ -1.66
SF3B1-203ENST00000414174 MAF1Q9H063 256 aa4.7□□□□□ -1.66
SF3B1-203ENST00000414174 BRD7Q9NPI1 651 aa4.7□□□□□ -1.66
SF3B1-203ENST00000414174 NOP58Q9Y2X3 529 aaKnown RBP4.7□□□□□ -1.66
SF3B1-203ENST00000414174 NUB1Q9Y5A7 615 aa4.7□□□□□ -1.66
SF3B1-203ENST00000414174 PTCD1O75127 700 aaKnown RBP4.69□□□□□ -1.66
SF3B1-203ENST00000414174 PEX14O75381 377 aa4.69□□□□□ -1.66
SF3B1-203ENST00000414174 MAP4K4O95819 1239 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-203ENST00000414174 ZFYVE27Q5T4F4 411 aa4.69□□□□□ -1.66
SF3B1-203ENST00000414174 LARP1Q6PKG0 1096 aaKnown RBP4.69□□□□□ -1.66
SF3B1-203ENST00000414174 BHMTQ93088 406 aa4.69□□□□□ -1.66
SF3B1-203ENST00000414174 MRRFQ96E11 262 aaKnown RBP4.69□□□□□ -1.66
SF3B1-203ENST00000414174 CEP63Q96MT8 703 aa4.69□□□□□ -1.66
SF3B1-203ENST00000414174 KRTAP4-5Q9BYR2 181 aa4.69□□□□□ -1.66
SF3B1-203ENST00000414174 UBE2OQ9C0C9 1292 aaKnown RBP4.69□□□□□ -1.66
SF3B1-203ENST00000414174 DMGDHQ9UI17 866 aaKnown RBP4.69□□□□□ -1.66
SF3B1-203ENST00000414174 SH3BP1Q9Y3L3 701 aa4.69□□□□□ -1.66
SF3B1-203ENST00000414174 DLL1O00548 723 aa4.68□□□□□ -1.66
SF3B1-203ENST00000414174 ADAMTS4O75173 837 aa4.68□□□□□ -1.66
SF3B1-203ENST00000414174 ZRANB2O95218 330 aaKnown RBP eCLIP4.68□□□□□ -1.66
SF3B1-203ENST00000414174 IGLV1-40P01703 118 aa4.68□□□□□ -1.66
SF3B1-203ENST00000414174 SPINK2P20155 84 aa4.68□□□□□ -1.66
SF3B1-203ENST00000414174 IGFBP4P22692 258 aa4.68□□□□□ -1.66
SF3B1-203ENST00000414174 WEE1P30291 646 aa4.68□□□□□ -1.66
SF3B1-203ENST00000414174 SRPK2P78362 688 aaKnown RBP4.68□□□□□ -1.66
SF3B1-203ENST00000414174 GRIK5Q16478 980 aa4.68□□□□□ -1.66
SF3B1-203ENST00000414174 PCSK7Q16549 785 aa4.68□□□□□ -1.66
SF3B1-203ENST00000414174 CDCA8Q53HL2 280 aa4.68□□□□□ -1.66
SF3B1-203ENST00000414174 BTLAQ7Z6A9 289 aa4.68□□□□□ -1.66
SF3B1-203ENST00000414174 CXorf38Q8TB03 319 aa4.68□□□□□ -1.66
SF3B1-203ENST00000414174 CHMP7Q8WUX9 453 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-203ENST00000414174 TTC9Q92623 222 aa4.68□□□□□ -1.66
SF3B1-203ENST00000414174 NGLY1Q96IV0 654 aa4.68□□□□□ -1.66
SF3B1-203ENST00000414174 AKTIPQ9H8T0 292 aa4.68□□□□□ -1.66
SF3B1-203ENST00000414174 QTRT2Q9H974 415 aaKnown RBP4.68□□□□□ -1.66
SF3B1-203ENST00000414174 ZMIZ1Q9ULJ6 1067 aa4.68□□□□□ -1.66
SF3B1-203ENST00000414174 HDAC5Q9UQL6 1122 aa4.68□□□□□ -1.66
SF3B1-203ENST00000414174 CCDC194A0A1B0GVG4 234 aa4.67□□□□□ -1.66
SF3B1-203ENST00000414174 GOLIM4O00461 696 aa4.67□□□□□ -1.66
SF3B1-203ENST00000414174 SH3BP5O60239 455 aa4.67□□□□□ -1.66
SF3B1-203ENST00000414174 WNT11O96014 354 aa4.67□□□□□ -1.66
SF3B1-203ENST00000414174 SSFA2P28290 1259 aa4.67□□□□□ -1.66
SF3B1-203ENST00000414174 GRIK1P39086 918 aa4.67□□□□□ -1.66
SF3B1-203ENST00000414174 RTN1Q16799 776 aa4.67□□□□□ -1.66
SF3B1-203ENST00000414174 DTX1Q86Y01 620 aa4.67□□□□□ -1.66
SF3B1-203ENST00000414174 OTUD6BQ8N6M0 293 aa4.67□□□□□ -1.66
SF3B1-203ENST00000414174 VRTNQ9H8Y1 702 aa4.67□□□□□ -1.66
SF3B1-203ENST00000414174 DNAJB12Q9NXW2 375 aaKnown RBP4.67□□□□□ -1.66
SF3B1-203ENST00000414174 FRRS1LQ9P0K9 344 aa4.67□□□□□ -1.66
SF3B1-203ENST00000414174 ADGRE2Q9UHX3 823 aa4.67□□□□□ -1.66
SF3B1-203ENST00000414174 FEZ2Q9UHY8 353 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-203ENST00000414174 RAXQ9Y2V3 346 aa4.67□□□□□ -1.66
SF3B1-203ENST00000414174 RRP9O43818 475 aaKnown RBP4.66□□□□□ -1.66
SF3B1-203ENST00000414174 TGFB1P01137 390 aa4.66□□□□□ -1.66
SF3B1-203ENST00000414174 ZC3H6P61129 1189 aaKnown RBP4.66□□□□□ -1.66
SF3B1-203ENST00000414174 FAM69CQ0P6D2 419 aa4.66□□□□□ -1.66
SF3B1-203ENST00000414174 SF3A1Q15459 793 aaKnown RBP4.66□□□□□ -1.66
SF3B1-203ENST00000414174 NBPF9Q3BBW0 867 aa4.66□□□□□ -1.66
SF3B1-203ENST00000414174 IER5Q5VY09 327 aa4.66□□□□□ -1.66
SF3B1-203ENST00000414174 TXNDC2Q86VQ3 553 aa4.66□□□□□ -1.66
SF3B1-203ENST00000414174 POU5F2Q8N7G0 328 aa4.66□□□□□ -1.66
SF3B1-203ENST00000414174 STK32AQ8WU08 396 aa4.66□□□□□ -1.66
SF3B1-203ENST00000414174 HINFPQ9BQA5 517 aa4.66□□□□□ -1.66
SF3B1-203ENST00000414174 MRPL18Q9H0U6 180 aaKnown RBP4.66□□□□□ -1.66
SF3B1-203ENST00000414174 IGFLR1Q9H665 355 aa4.66□□□□□ -1.66
SF3B1-203ENST00000414174 KLK14Q9P0G3 267 aa4.66□□□□□ -1.66
SF3B1-203ENST00000414174 KLHL42Q9P2K6 505 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms