RNA–Protein interactions for RNA: ENST00000414009.1

HPS1-205, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-205ENST00000414009 SRGAP3O43295 1099 aa18.35■□□□□ 0.53
HPS1-205ENST00000414009 WASHC4Q2M389 1173 aa18.35■□□□□ 0.53
HPS1-205ENST00000414009 SLC51AQ86UW1 340 aa18.35■□□□□ 0.53
HPS1-205ENST00000414009 NIM1KQ8IY84 436 aa18.35■□□□□ 0.53
HPS1-205ENST00000414009 ZC3H12CQ9C0D7 883 aaKnown RBP18.35■□□□□ 0.53
HPS1-205ENST00000414009 SNED1Q8TER0 1413 aa18.34■□□□□ 0.53
HPS1-205ENST00000414009 DICER1Q9UPY3 1922 aaKnown RBP18.34■□□□□ 0.53
HPS1-205ENST00000414009 CHRNDQ07001 517 aa18.34■□□□□ 0.53
HPS1-205ENST00000414009 AOC3Q16853 763 aa18.34■□□□□ 0.53
HPS1-205ENST00000414009 TBC1D16Q8TBP0 767 aa18.34■□□□□ 0.53
HPS1-205ENST00000414009 OTUD5Q96G74 571 aa18.34■□□□□ 0.53
HPS1-205ENST00000414009 LEMD3Q9Y2U8 911 aa18.34■□□□□ 0.53
HPS1-205ENST00000414009 MROH5Q6ZUA9 1318 aa18.33■□□□□ 0.53
HPS1-205ENST00000414009 C20orf194Q5TEA3 1177 aa18.33■□□□□ 0.52
HPS1-205ENST00000414009 DPY19L2Q6NUT2 758 aa18.33■□□□□ 0.52
HPS1-205ENST00000414009 C1orf115Q9H7X2 142 aa18.33■□□□□ 0.52
HPS1-205ENST00000414009 RIMBP2O15034 1052 aa18.32■□□□□ 0.52
HPS1-205ENST00000414009 PRELPP51888 382 aa18.32■□□□□ 0.52
HPS1-205ENST00000414009 KIAA2012Q0VF49 1180 aa18.32■□□□□ 0.52
HPS1-205ENST00000414009 MTX1Q13505 466 aa18.32■□□□□ 0.52
HPS1-205ENST00000414009 METTL24Q5JXM2 366 aa18.32■□□□□ 0.52
HPS1-205ENST00000414009 POLLQ9UGP5 575 aa18.32■□□□□ 0.52
HPS1-205ENST00000414009 PYGBP11216 843 aa18.31■□□□□ 0.52
HPS1-205ENST00000414009 EIF6P56537 245 aaKnown RBP18.31■□□□□ 0.52
HPS1-205ENST00000414009 HELBQ8NG08 1087 aaPredicted RBP18.31■□□□□ 0.52
HPS1-205ENST00000414009 KLHDC4Q8TBB5 520 aa18.31■□□□□ 0.52
HPS1-205ENST00000414009 PUS3Q9BZE2 481 aaKnown RBP18.31■□□□□ 0.52
HPS1-205ENST00000414009 SIL1Q9H173 461 aa18.31■□□□□ 0.52
HPS1-205ENST00000414009 TIAM2Q8IVF5 1701 aa18.31■□□□□ 0.52
HPS1-205ENST00000414009 ZNF804BA4D1E1 1349 aa18.3■□□□□ 0.52
HPS1-205ENST00000414009 KDM2BQ8NHM5 1336 aa18.3■□□□□ 0.52
HPS1-205ENST00000414009 EYA2O00167 538 aa18.3■□□□□ 0.52
HPS1-205ENST00000414009 RFX5P48382 616 aaPredicted RBP18.3■□□□□ 0.52
HPS1-205ENST00000414009 ATP8B2P98198 1209 aa18.3■□□□□ 0.52
HPS1-205ENST00000414009 PTPN12Q05209 780 aaKnown RBP18.3■□□□□ 0.52
HPS1-205ENST00000414009 IFNLR1Q8IU57 520 aaPredicted RBP18.3■□□□□ 0.52
HPS1-205ENST00000414009 TAF5LO75529 589 aa18.29■□□□□ 0.52
HPS1-205ENST00000414009 CIAO1O76071 339 aa18.29■□□□□ 0.52
HPS1-205ENST00000414009 LRRC24Q50LG9 513 aa18.29■□□□□ 0.52
HPS1-205ENST00000414009 COPRSQ9NQ92 184 aa18.29■□□□□ 0.52
HPS1-205ENST00000414009 RIPOR2Q9Y4F9 1068 aa18.29■□□□□ 0.52
HPS1-205ENST00000414009 SUPT16HQ9Y5B9 1047 aaKnown RBP18.29■□□□□ 0.52
HPS1-205ENST00000414009 DUOX1Q9NRD9 1551 aa18.29■□□□□ 0.52
HPS1-205ENST00000414009 POTEFA5A3E0 1075 aa18.28■□□□□ 0.52
HPS1-205ENST00000414009 HMMRO75330 724 aa18.28■□□□□ 0.52
HPS1-205ENST00000414009 POTEJP0CG39 1038 aa18.28■□□□□ 0.52
HPS1-205ENST00000414009 G3BP1Q13283 466 aaKnown RBP eCLIP18.28■□□□□ 0.52
HPS1-205ENST00000414009 ZNF526Q8TF50 670 aaPredicted RBP18.28■□□□□ 0.52
HPS1-205ENST00000414009 GPR101Q96P66 508 aaPredicted RBP18.28■□□□□ 0.52
HPS1-205ENST00000414009 ZBTB40Q9NUA8 1239 aa18.28■□□□□ 0.52
HPS1-205ENST00000414009 ZNRF3Q9ULT6 936 aa18.28■□□□□ 0.52
HPS1-205ENST00000414009 LTBP1Q14766 1721 aa18.28■□□□□ 0.52
HPS1-205ENST00000414009 UTRNP46939 3433 aa18.28■□□□□ 0.52
HPS1-205ENST00000414009 MED23Q9ULK4 1368 aa18.28■□□□□ 0.52
HPS1-205ENST00000414009 PNMA6EA0A0J9YXQ4 647 aa18.27■□□□□ 0.52
HPS1-205ENST00000414009 IL15P40933 162 aaPredicted RBP18.27■□□□□ 0.52
HPS1-205ENST00000414009 OS9Q13438 667 aaPredicted RBP18.27■□□□□ 0.52
HPS1-205ENST00000414009 UBE4AQ14139 1066 aa18.27■□□□□ 0.52
HPS1-205ENST00000414009 RPAP2Q8IXW5 612 aaPredicted RBP18.27■□□□□ 0.52
HPS1-205ENST00000414009 GPBP1L1Q9HC44 474 aaPredicted RBP18.27■□□□□ 0.52
HPS1-205ENST00000414009 CEP126Q9P2H0 1117 aa18.27■□□□□ 0.52
HPS1-205ENST00000414009 PA2G4Q9UQ80 394 aaKnown RBP18.27■□□□□ 0.52
HPS1-205ENST00000414009 GLTPD2A6NH11 291 aa18.26■□□□□ 0.51
HPS1-205ENST00000414009 FZD9O00144 591 aa18.26■□□□□ 0.51
HPS1-205ENST00000414009 DOK7Q18PE1 504 aa18.26■□□□□ 0.51
HPS1-205ENST00000414009 CEP85Q6P2H3 762 aa18.26■□□□□ 0.51
HPS1-205ENST00000414009 DBNDD1Q9H9R9 158 aa18.26■□□□□ 0.51
HPS1-205ENST00000414009 ECE2O60344 883 aa18.25■□□□□ 0.51
HPS1-205ENST00000414009 PDE8BO95263 885 aa18.25■□□□□ 0.51
HPS1-205ENST00000414009 TNIP1Q15025 636 aa18.25■□□□□ 0.51
HPS1-205ENST00000414009 ZNF804AQ7Z570 1209 aa18.25■□□□□ 0.51
HPS1-205ENST00000414009 SSH3Q8TE77 659 aa18.25■□□□□ 0.51
HPS1-205ENST00000414009 SURF6O75683 361 aaKnown RBP18.24■□□□□ 0.51
HPS1-205ENST00000414009 IFIT1P09914 478 aaKnown RBP18.24■□□□□ 0.51
HPS1-205ENST00000414009 PUM3Q15397 648 aaKnown RBP18.24■□□□□ 0.51
HPS1-205ENST00000414009 CIAPIN1Q6FI81 312 aa18.24■□□□□ 0.51
HPS1-205ENST00000414009 ZNF784Q8NCA9 323 aaPredicted RBP18.24■□□□□ 0.51
HPS1-205ENST00000414009 COA1Q9GZY4 146 aa18.24■□□□□ 0.51
HPS1-205ENST00000414009 GJA3Q9Y6H8 435 aa18.24■□□□□ 0.51
HPS1-205ENST00000414009 A0A1B0GUL6 1792 aa18.24■□□□□ 0.51
HPS1-205ENST00000414009 SLC5A1P13866 664 aa18.23■□□□□ 0.51
HPS1-205ENST00000414009 CAVIN4Q5BKX8 364 aa18.23■□□□□ 0.51
HPS1-205ENST00000414009 ATG9AQ7Z3C6 839 aa18.23■□□□□ 0.51
HPS1-205ENST00000414009 PODNQ7Z5L7 613 aa18.23■□□□□ 0.51
HPS1-205ENST00000414009 VPS37DQ86XT2 251 aa18.23■□□□□ 0.51
HPS1-205ENST00000414009 GPC2Q8N158 579 aa18.23■□□□□ 0.51
HPS1-205ENST00000414009 CRBNQ96SW2 442 aa18.23■□□□□ 0.51
HPS1-205ENST00000414009 ZNF541Q9H0D2 1346 aa18.23■□□□□ 0.51
HPS1-205ENST00000414009 WTIPA6NIX2 430 aaPredicted RBP18.22■□□□□ 0.51
HPS1-205ENST00000414009 SNAP23O00161 211 aa18.22■□□□□ 0.51
HPS1-205ENST00000414009 RAD17O75943 681 aa18.22■□□□□ 0.51
HPS1-205ENST00000414009 DDNO94850 711 aaPredicted RBP18.22■□□□□ 0.51
HPS1-205ENST00000414009 GSE1Q14687 1217 aa18.22■□□□□ 0.51
HPS1-205ENST00000414009 HSP90AB4PQ58FF6 505 aa18.22■□□□□ 0.51
HPS1-205ENST00000414009 C15orf52Q6ZUT6 534 aaKnown RBP18.22■□□□□ 0.51
HPS1-205ENST00000414009 AKAP2Q9Y2D5 859 aa18.22■□□□□ 0.51
HPS1-205ENST00000414009 COL4A5P29400 1685 aa18.22■□□□□ 0.51
HPS1-205ENST00000414009 ATP2B3Q16720 1220 aa18.21■□□□□ 0.51
HPS1-205ENST00000414009 VGLL2Q8N8G2 317 aa18.21■□□□□ 0.51
HPS1-205ENST00000414009 LPIN2Q92539 896 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms