RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 EIF4A1P60842 406 aaKnown RBP12.52□□□□□ -0.41
HCG27-202ENST00000414008 SH3BP2P78314 561 aa12.52□□□□□ -0.41
HCG27-202ENST00000414008 CALD1Q05682 793 aaKnown RBP12.52□□□□□ -0.41
HCG27-202ENST00000414008 CCDC27Q2M243 656 aa12.52□□□□□ -0.41
HCG27-202ENST00000414008 CYP4X1Q8N118 509 aa12.52□□□□□ -0.41
HCG27-202ENST00000414008 ZNF511Q8NB15 262 aa12.52□□□□□ -0.41
HCG27-202ENST00000414008 CCDC87Q9NVE4 849 aa12.52□□□□□ -0.41
HCG27-202ENST00000414008 TAF1LQ8IZX4 1826 aa12.52□□□□□ -0.41
HCG27-202ENST00000414008 EHBP1Q8NDI1 1231 aa12.51□□□□□ -0.41
HCG27-202ENST00000414008 USP16Q9Y5T5 823 aa12.51□□□□□ -0.41
HCG27-202ENST00000414008 PRAMEF22A3QJZ6 481 aa12.5□□□□□ -0.41
HCG27-202ENST00000414008 GIGYF1O75420 1035 aaPredicted RBP12.5□□□□□ -0.41
HCG27-202ENST00000414008 CANXP27824 592 aaKnown RBP12.5□□□□□ -0.41
HCG27-202ENST00000414008 RFC4P35249 363 aa12.5□□□□□ -0.41
HCG27-202ENST00000414008 Q6ZNB5 142 aa12.5□□□□□ -0.41
HCG27-202ENST00000414008 WWC1Q8IX03 1113 aa12.5□□□□□ -0.41
HCG27-202ENST00000414008 ZBTB1Q9Y2K1 713 aa12.5□□□□□ -0.41
HCG27-202ENST00000414008 UBR2Q8IWV8 1755 aa12.5□□□□□ -0.41
HCG27-202ENST00000414008 TTC24A2A3L6 582 aaPredicted RBP12.49□□□□□ -0.41
HCG27-202ENST00000414008 A1BGP04217 495 aa12.49□□□□□ -0.41
HCG27-202ENST00000414008 MRGPRX2Q96LB1 330 aa12.49□□□□□ -0.41
HCG27-202ENST00000414008 IFT57Q9NWB7 429 aa12.49□□□□□ -0.41
HCG27-202ENST00000414008 CASZ1Q86V15 1759 aa12.48□□□□□ -0.41
HCG27-202ENST00000414008 TJP1Q07157 1748 aa12.48□□□□□ -0.41
HCG27-202ENST00000414008 SOS1Q07889 1333 aaPredicted RBP12.48□□□□□ -0.41
HCG27-202ENST00000414008 ZNF853P0CG23 659 aa12.48□□□□□ -0.41
HCG27-202ENST00000414008 GNAI1P63096 354 aa12.48□□□□□ -0.41
HCG27-202ENST00000414008 NGEFQ8N5V2 710 aa12.48□□□□□ -0.41
HCG27-202ENST00000414008 COL5A3P25940 1745 aaPredicted RBP12.48□□□□□ -0.41
HCG27-202ENST00000414008 QSER1Q2KHR3 1735 aa12.48□□□□□ -0.41
HCG27-202ENST00000414008 CICQ96RK0 1608 aaPredicted RBP12.48□□□□□ -0.41
HCG27-202ENST00000414008 POLD1P28340 1107 aa12.47□□□□□ -0.41
HCG27-202ENST00000414008 IL6STP40189 918 aaPredicted RBP12.47□□□□□ -0.41
HCG27-202ENST00000414008 EIF5P55010 431 aaKnown RBP12.47□□□□□ -0.41
HCG27-202ENST00000414008 NR6A1Q15406 480 aa12.47□□□□□ -0.41
HCG27-202ENST00000414008 PKDCCQ504Y2 493 aa12.47□□□□□ -0.41
HCG27-202ENST00000414008 MSL1Q68DK7 614 aa12.47□□□□□ -0.41
HCG27-202ENST00000414008 NPM2Q86SE8 214 aaKnown RBP12.47□□□□□ -0.41
HCG27-202ENST00000414008 PNMA1Q8ND90 353 aa12.47□□□□□ -0.41
HCG27-202ENST00000414008 SNIP1Q8TAD8 396 aaKnown RBP12.47□□□□□ -0.41
HCG27-202ENST00000414008 MBIPQ9NS73 344 aa12.47□□□□□ -0.41
HCG27-202ENST00000414008 PPP1R1BQ9UD71 204 aaPredicted RBP12.47□□□□□ -0.41
HCG27-202ENST00000414008 MYH14Q7Z406 1995 aaKnown RBP12.47□□□□□ -0.41
HCG27-202ENST00000414008 UBR3Q6ZT12 1888 aa12.46□□□□□ -0.41
HCG27-202ENST00000414008 TUBGCP6Q96RT7 1819 aa12.46□□□□□ -0.41
HCG27-202ENST00000414008 A0A087WZG4 1122 aa12.46□□□□□ -0.41
HCG27-202ENST00000414008 AGERQ15109 404 aa12.46□□□□□ -0.41
HCG27-202ENST00000414008 WDR63Q8IWG1 891 aa12.46□□□□□ -0.41
HCG27-202ENST00000414008 BANK1Q8NDB2 785 aa12.46□□□□□ -0.41
HCG27-202ENST00000414008 GPKOWQ92917 476 aaPredicted RBP eCLIP12.46□□□□□ -0.41
HCG27-202ENST00000414008 TOR4AQ9NXH8 423 aa12.46□□□□□ -0.41
HCG27-202ENST00000414008 ZNF330Q9Y3S2 320 aaPredicted RBP12.46□□□□□ -0.41
HCG27-202ENST00000414008 IL16Q14005 1332 aa12.45□□□□□ -0.42
HCG27-202ENST00000414008 GYS1P13807 737 aa12.45□□□□□ -0.42
HCG27-202ENST00000414008 VARSP26640 1264 aaKnown RBP12.45□□□□□ -0.42
HCG27-202ENST00000414008 PIP4K2AP48426 406 aaPredicted RBP12.45□□□□□ -0.42
HCG27-202ENST00000414008 BPHLQ86WA6 291 aaPredicted RBP12.45□□□□□ -0.42
HCG27-202ENST00000414008 NLGN1Q8N2Q7 840 aa12.45□□□□□ -0.42
HCG27-202ENST00000414008 SRP68Q9UHB9 627 aaKnown RBP12.45□□□□□ -0.42
HCG27-202ENST00000414008 SRCAPQ6ZRS2 3230 aa12.45□□□□□ -0.42
HCG27-202ENST00000414008 KDM3BQ7LBC6 1761 aa12.45□□□□□ -0.42
HCG27-202ENST00000414008 COL15A1P39059 1388 aa12.44□□□□□ -0.42
HCG27-202ENST00000414008 USP42Q9H9J4 1324 aaKnown RBP12.44□□□□□ -0.42
HCG27-202ENST00000414008 FAM187AA6NFU0 413 aa12.44□□□□□ -0.42
HCG27-202ENST00000414008 EIF2S2P20042 333 aaKnown RBP12.44□□□□□ -0.42
HCG27-202ENST00000414008 KRT24Q2M2I5 525 aa12.44□□□□□ -0.42
HCG27-202ENST00000414008 NBPF10Q6P3W6 841 aaKnown RBP12.44□□□□□ -0.42
HCG27-202ENST00000414008 ERICH6Q7L0X2 663 aa12.44□□□□□ -0.42
HCG27-202ENST00000414008 NBPF15Q8N660 670 aa12.44□□□□□ -0.42
HCG27-202ENST00000414008 ARXQ96QS3 562 aa12.44□□□□□ -0.42
HCG27-202ENST00000414008 NARFQ9UHQ1 456 aa12.44□□□□□ -0.42
HCG27-202ENST00000414008 FKBPLQ9UIM3 349 aa12.44□□□□□ -0.42
HCG27-202ENST00000414008 LRP5O75197 1615 aa12.44□□□□□ -0.42
HCG27-202ENST00000414008 DGAT1O75907 488 aa12.43□□□□□ -0.42
HCG27-202ENST00000414008 DUSP27Q5VZP5 1158 aa12.43□□□□□ -0.42
HCG27-202ENST00000414008 USPL1Q5W0Q7 1092 aa12.43□□□□□ -0.42
HCG27-202ENST00000414008 TBC1D2BQ9UPU7 963 aa12.43□□□□□ -0.42
HCG27-202ENST00000414008 ERBB4Q15303 1308 aa12.42□□□□□ -0.42
HCG27-202ENST00000414008 ZC3H4Q9UPT8 1303 aaKnown RBP12.42□□□□□ -0.42
HCG27-202ENST00000414008 HOXB7P09629 217 aa12.42□□□□□ -0.42
HCG27-202ENST00000414008 DZIP3Q86Y13 1208 aaKnown RBP12.42□□□□□ -0.42
HCG27-202ENST00000414008 TSR2Q969E8 191 aaKnown RBP12.42□□□□□ -0.42
HCG27-202ENST00000414008 HMX1Q9NP08 348 aaPredicted RBP12.42□□□□□ -0.42
HCG27-202ENST00000414008 ELL2O00472 640 aaPredicted RBP12.41□□□□□ -0.42
HCG27-202ENST00000414008 MMP10P09238 476 aa12.41□□□□□ -0.42
HCG27-202ENST00000414008 MYL6BP14649 208 aa12.41□□□□□ -0.42
HCG27-202ENST00000414008 FAM174AQ8TBP5 190 aa12.41□□□□□ -0.42
HCG27-202ENST00000414008 FOXJ1Q92949 421 aa12.41□□□□□ -0.42
HCG27-202ENST00000414008 HDGFL1Q5TGJ6 251 aa12.4□□□□□ -0.42
HCG27-202ENST00000414008 C8orf58Q8NAV2 365 aa12.4□□□□□ -0.42
HCG27-202ENST00000414008 MYH16Q9H6N6 1097 aa12.4□□□□□ -0.42
HCG27-202ENST00000414008 ZNF521Q96K83 1311 aa12.39□□□□□ -0.43
HCG27-202ENST00000414008 APBB1O00213 710 aa12.39□□□□□ -0.43
HCG27-202ENST00000414008 SIAH2O43255 324 aa12.39□□□□□ -0.43
HCG27-202ENST00000414008 CAMTA2O94983 1202 aa12.39□□□□□ -0.43
HCG27-202ENST00000414008 ALDH1A1P00352 501 aa12.39□□□□□ -0.43
HCG27-202ENST00000414008 TM4SF1P30408 202 aa12.39□□□□□ -0.43
HCG27-202ENST00000414008 PDXDC2PQ6P474 469 aa12.39□□□□□ -0.43
HCG27-202ENST00000414008 CHMP4AQ9BY43 222 aa12.39□□□□□ -0.43
HCG27-202ENST00000414008 FHDC1Q9C0D6 1143 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms