RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 FTSJ3Q8IY81 847 aaKnown RBP12.61□□□□□ -0.39
TMEM248-202ENST00000413593 DZIP1LQ8IYY4 767 aaKnown RBP12.61□□□□□ -0.39
TMEM248-202ENST00000413593 KLHDC4Q8TBB5 520 aa12.61□□□□□ -0.39
TMEM248-202ENST00000413593 MROH5Q6ZUA9 1318 aa12.61□□□□□ -0.39
TMEM248-202ENST00000413593 IRS2Q9Y4H2 1338 aa12.61□□□□□ -0.39
TMEM248-202ENST00000413593 PLIN1O60240 522 aa12.6□□□□□ -0.39
TMEM248-202ENST00000413593 HSPA6P17066 643 aa12.6□□□□□ -0.39
TMEM248-202ENST00000413593 PTPN12Q05209 780 aaKnown RBP12.6□□□□□ -0.39
TMEM248-202ENST00000413593 LRRC24Q50LG9 513 aa12.6□□□□□ -0.39
TMEM248-202ENST00000413593 EAPPQ56P03 285 aaPredicted RBP12.6□□□□□ -0.39
TMEM248-202ENST00000413593 CHADLQ6NUI6 762 aa12.6□□□□□ -0.39
TMEM248-202ENST00000413593 C15orf52Q6ZUT6 534 aaKnown RBP12.6□□□□□ -0.39
TMEM248-202ENST00000413593 LDHDQ86WU2 507 aa12.6□□□□□ -0.39
TMEM248-202ENST00000413593 COA1Q9GZY4 146 aa12.6□□□□□ -0.39
TMEM248-202ENST00000413593 RCAN3Q9UKA8 241 aa12.6□□□□□ -0.39
TMEM248-202ENST00000413593 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
TMEM248-202ENST00000413593 VIL1P09327 827 aaKnown RBP12.59□□□□□ -0.39
TMEM248-202ENST00000413593 RPS12P25398 132 aaKnown RBP12.59□□□□□ -0.39
TMEM248-202ENST00000413593 DPF2Q92785 391 aa12.59□□□□□ -0.39
TMEM248-202ENST00000413593 SCN4AP35499 1836 aa12.59□□□□□ -0.39
TMEM248-202ENST00000413593 SPEF2Q9C093 1822 aa12.59□□□□□ -0.39
TMEM248-202ENST00000413593 SHTN1A0MZ66 631 aa12.58□□□□□ -0.4
TMEM248-202ENST00000413593 USP17L3A6NCW0 530 aa12.58□□□□□ -0.4
TMEM248-202ENST00000413593 USP17L4A6NCW7 530 aa12.58□□□□□ -0.4
TMEM248-202ENST00000413593 EYA2O00167 538 aa12.58□□□□□ -0.4
TMEM248-202ENST00000413593 GNAI2P04899 355 aa12.58□□□□□ -0.4
TMEM248-202ENST00000413593 MTX1Q13505 466 aa12.58□□□□□ -0.4
TMEM248-202ENST00000413593 UBE4AQ14139 1066 aa12.58□□□□□ -0.4
TMEM248-202ENST00000413593 METTL24Q5JXM2 366 aa12.58□□□□□ -0.4
TMEM248-202ENST00000413593 USP50Q70EL3 339 aaPredicted RBP12.58□□□□□ -0.4
TMEM248-202ENST00000413593 USP17L1Q7RTZ2 530 aa12.58□□□□□ -0.4
TMEM248-202ENST00000413593 ITPRIPQ8IWB1 547 aa12.58□□□□□ -0.4
TMEM248-202ENST00000413593 MICALL2Q8IY33 904 aa12.58□□□□□ -0.4
TMEM248-202ENST00000413593 VGLL2Q8N8G2 317 aa12.58□□□□□ -0.4
TMEM248-202ENST00000413593 CD209Q9NNX6 404 aa12.58□□□□□ -0.4
TMEM248-202ENST00000413593 ADARB2Q9NS39 739 aaKnown RBP12.58□□□□□ -0.4
TMEM248-202ENST00000413593 CNOT7Q9UIV1 285 aaKnown RBP12.58□□□□□ -0.4
TMEM248-202ENST00000413593 ZNF609O15014 1411 aa12.57□□□□□ -0.4
TMEM248-202ENST00000413593 PDE8BO95263 885 aa12.57□□□□□ -0.4
TMEM248-202ENST00000413593 RSBN1LQ6PCB5 846 aaPredicted RBP12.57□□□□□ -0.4
TMEM248-202ENST00000413593 ATG9AQ7Z3C6 839 aa12.57□□□□□ -0.4
TMEM248-202ENST00000413593 AGBL3Q8NEM8 1001 aa12.57□□□□□ -0.4
TMEM248-202ENST00000413593 PANK1Q8TE04 598 aa12.57□□□□□ -0.4
TMEM248-202ENST00000413593 YTHDC1Q96MU7 727 aaKnown RBP12.57□□□□□ -0.4
TMEM248-202ENST00000413593 FBXO3Q9UK99 471 aa12.57□□□□□ -0.4
TMEM248-202ENST00000413593 CLEC11AQ9Y240 323 aa12.57□□□□□ -0.4
TMEM248-202ENST00000413593 H7C1D1 291 aa12.56□□□□□ -0.4
TMEM248-202ENST00000413593 ZBTB7BO15156 539 aaPredicted RBP12.56□□□□□ -0.4
TMEM248-202ENST00000413593 SRGAP3O43295 1099 aa12.56□□□□□ -0.4
TMEM248-202ENST00000413593 CIAO1O76071 339 aa12.56□□□□□ -0.4
TMEM248-202ENST00000413593 MS4A1P11836 297 aa12.56□□□□□ -0.4
TMEM248-202ENST00000413593 DACT2Q5SW24 774 aa12.56□□□□□ -0.4
TMEM248-202ENST00000413593 STRIP1Q5VSL9 837 aa12.56□□□□□ -0.4
TMEM248-202ENST00000413593 ZNF804AQ7Z570 1209 aa12.56□□□□□ -0.4
TMEM248-202ENST00000413593 TRPM4Q8TD43 1214 aa12.56□□□□□ -0.4
TMEM248-202ENST00000413593 GMLQ99445 158 aa12.56□□□□□ -0.4
TMEM248-202ENST00000413593 SIL1Q9H173 461 aa12.56□□□□□ -0.4
TMEM248-202ENST00000413593 COPRSQ9NQ92 184 aa12.56□□□□□ -0.4
TMEM248-202ENST00000413593 PA2G4Q9UQ80 394 aaKnown RBP12.56□□□□□ -0.4
TMEM248-202ENST00000413593 ADAMTSL1Q8N6G6 1762 aa12.56□□□□□ -0.4
TMEM248-202ENST00000413593 ITGBL1O95965 494 aaPredicted RBP12.55□□□□□ -0.4
TMEM248-202ENST00000413593 IL1R1P14778 569 aa12.55□□□□□ -0.4
TMEM248-202ENST00000413593 APLP1P51693 650 aa12.55□□□□□ -0.4
TMEM248-202ENST00000413593 HIRAP54198 1017 aaPredicted RBP12.55□□□□□ -0.4
TMEM248-202ENST00000413593 MAP1SQ66K74 1059 aaPredicted RBP12.55□□□□□ -0.4
TMEM248-202ENST00000413593 SAMD7Q7Z3H4 446 aa12.55□□□□□ -0.4
TMEM248-202ENST00000413593 FBXW7Q969H0 707 aa12.55□□□□□ -0.4
TMEM248-202ENST00000413593 SCN9AQ15858 1988 aa12.55□□□□□ -0.4
TMEM248-202ENST00000413593 PNMA6EA0A0J9YXQ4 647 aa12.54□□□□□ -0.4
TMEM248-202ENST00000413593 EGFRP00533 1210 aa12.54□□□□□ -0.4
TMEM248-202ENST00000413593 ATXN8OSP0DMR3 200 aa12.54□□□□□ -0.4
TMEM248-202ENST00000413593 FGFR2P21802 821 aa12.54□□□□□ -0.4
TMEM248-202ENST00000413593 IL15P40933 162 aaPredicted RBP12.54□□□□□ -0.4
TMEM248-202ENST00000413593 GYG1P46976 350 aa12.54□□□□□ -0.4
TMEM248-202ENST00000413593 ZNF280AP59817 542 aaPredicted RBP12.54□□□□□ -0.4
TMEM248-202ENST00000413593 GTF2IP78347 998 aa12.54□□□□□ -0.4
TMEM248-202ENST00000413593 PUM3Q15397 648 aaKnown RBP12.54□□□□□ -0.4
TMEM248-202ENST00000413593 TTLL5Q6EMB2 1281 aa12.54□□□□□ -0.4
TMEM248-202ENST00000413593 CNTROBQ8N137 903 aa12.54□□□□□ -0.4
TMEM248-202ENST00000413593 FAM84BQ96KN1 310 aaPredicted RBP12.54□□□□□ -0.4
TMEM248-202ENST00000413593 MXD3Q9BW11 206 aa12.54□□□□□ -0.4
TMEM248-202ENST00000413593 MYO3BQ8WXR4 1341 aa12.54□□□□□ -0.4
TMEM248-202ENST00000413593 PASKQ96RG2 1323 aa12.54□□□□□ -0.4
TMEM248-202ENST00000413593 A0A1B0GUL6 1792 aa12.53□□□□□ -0.4
TMEM248-202ENST00000413593 USP17L8P0C7I0 530 aa12.53□□□□□ -0.4
TMEM248-202ENST00000413593 HIBADHP31937 336 aaKnown RBP12.53□□□□□ -0.4
TMEM248-202ENST00000413593 TBC1D10BQ4KMP7 808 aaPredicted RBP12.53□□□□□ -0.4
TMEM248-202ENST00000413593 FBXO33Q7Z6M2 555 aa12.53□□□□□ -0.4
TMEM248-202ENST00000413593 TDRD7Q8NHU6 1098 aaKnown RBP12.53□□□□□ -0.4
TMEM248-202ENST00000413593 ZC3H15Q8WU90 426 aaKnown RBP12.53□□□□□ -0.4
TMEM248-202ENST00000413593 C1orf115Q9H7X2 142 aa12.53□□□□□ -0.4
TMEM248-202ENST00000413593 CEP126Q9P2H0 1117 aa12.53□□□□□ -0.4
TMEM248-202ENST00000413593 PGAP2Q9UHJ9 254 aa12.53□□□□□ -0.4
TMEM248-202ENST00000413593 SASH1O94885 1247 aa12.52□□□□□ -0.41
TMEM248-202ENST00000413593 IFIT1P09914 478 aaKnown RBP12.52□□□□□ -0.41
TMEM248-202ENST00000413593 MVPQ14764 893 aaKnown RBP12.52□□□□□ -0.41
TMEM248-202ENST00000413593 KIF4BQ2VIQ3 1234 aa12.52□□□□□ -0.41
TMEM248-202ENST00000413593 RBM26Q5T8P6 1007 aaKnown RBP12.52□□□□□ -0.41
TMEM248-202ENST00000413593 CERS5Q8N5B7 392 aa12.52□□□□□ -0.41
TMEM248-202ENST00000413593 LPIN2Q92539 896 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms