RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 GSDMDP57764 484 aa10.41□□□□□ -0.74
SIK3-202ENST00000413553 ZSCAN16Q9H4T2 348 aaPredicted RBP10.41□□□□□ -0.74
SIK3-202ENST00000413553 SLC52A2Q9HAB3 445 aa10.41□□□□□ -0.74
SIK3-202ENST00000413553 COL18A1P39060 1754 aa10.41□□□□□ -0.74
SIK3-202ENST00000413553 MYH15Q9Y2K3 1946 aa10.41□□□□□ -0.74
SIK3-202ENST00000413553 SMC2O95347 1197 aa10.41□□□□□ -0.74
SIK3-202ENST00000413553 ZRSR1Q15695 479 aaKnown RBP10.41□□□□□ -0.74
SIK3-202ENST00000413553 DHX40Q8IX18 779 aaKnown RBP10.41□□□□□ -0.74
SIK3-202ENST00000413553 GOLPH3LQ9H4A5 285 aa10.41□□□□□ -0.74
SIK3-202ENST00000413553 PCDH11XQ9BZA7 1347 aa10.41□□□□□ -0.74
SIK3-202ENST00000413553 PCDH11YQ9BZA8 1340 aa10.41□□□□□ -0.74
SIK3-202ENST00000413553 KAT6BQ8WYB5 2073 aa10.41□□□□□ -0.74
SIK3-202ENST00000413553 ADCY9O60503 1353 aa10.4□□□□□ -0.74
SIK3-202ENST00000413553 ZNF589Q86UQ0 364 aaPredicted RBP10.4□□□□□ -0.74
SIK3-202ENST00000413553 HOMER1Q86YM7 354 aa10.4□□□□□ -0.74
SIK3-202ENST00000413553 LRRN4CLQ8ND94 238 aa10.4□□□□□ -0.74
SIK3-202ENST00000413553 SIL1Q9H173 461 aa10.4□□□□□ -0.74
SIK3-202ENST00000413553 FAM53CQ9NYF3 392 aa10.4□□□□□ -0.74
SIK3-202ENST00000413553 GIGYF1O75420 1035 aaPredicted RBP10.4□□□□□ -0.74
SIK3-202ENST00000413553 ME1P48163 572 aa10.4□□□□□ -0.74
SIK3-202ENST00000413553 CLCN6P51797 869 aa10.4□□□□□ -0.74
SIK3-202ENST00000413553 ARHGAP29Q52LW3 1261 aa10.4□□□□□ -0.74
SIK3-202ENST00000413553 Q6ZUG5 572 aa10.4□□□□□ -0.74
SIK3-202ENST00000413553 TMC6Q7Z403 805 aa10.4□□□□□ -0.74
SIK3-202ENST00000413553 LRRC2Q9BYS8 371 aa10.4□□□□□ -0.74
SIK3-202ENST00000413553 NAT10Q9H0A0 1025 aaKnown RBP10.4□□□□□ -0.74
SIK3-202ENST00000413553 TLR7Q9NYK1 1049 aaKnown RBP10.4□□□□□ -0.74
SIK3-202ENST00000413553 A0A0G2JS52 829 aa10.39□□□□□ -0.75
SIK3-202ENST00000413553 NRDCO43847 1150 aa10.39□□□□□ -0.75
SIK3-202ENST00000413553 G3BP1Q13283 466 aaKnown RBP eCLIP10.39□□□□□ -0.75
SIK3-202ENST00000413553 ZNF790Q6PG37 636 aa10.39□□□□□ -0.75
SIK3-202ENST00000413553 FSIP1Q8NA03 581 aa10.39□□□□□ -0.75
SIK3-202ENST00000413553 EAF2Q96CJ1 260 aaPredicted RBP10.39□□□□□ -0.75
SIK3-202ENST00000413553 PPP1R13BQ96KQ4 1090 aa10.39□□□□□ -0.75
SIK3-202ENST00000413553 HMG20BQ9P0W2 317 aa10.39□□□□□ -0.75
SIK3-202ENST00000413553 NAP1L2Q9ULW6 460 aaPredicted RBP10.39□□□□□ -0.75
SIK3-202ENST00000413553 ABCC6O95255 1503 aa10.39□□□□□ -0.75
SIK3-202ENST00000413553 PPFIA3O75145 1194 aa10.39□□□□□ -0.75
SIK3-202ENST00000413553 FMNL2Q96PY5 1086 aa10.39□□□□□ -0.75
SIK3-202ENST00000413553 NEK1Q96PY6 1258 aa10.39□□□□□ -0.75
SIK3-202ENST00000413553 SDF4Q9BRK5 362 aa10.39□□□□□ -0.75
SIK3-202ENST00000413553 POLR3GO15318 223 aaPredicted RBP10.39□□□□□ -0.75
SIK3-202ENST00000413553 H2AFXP16104 143 aaPredicted RBP10.39□□□□□ -0.75
SIK3-202ENST00000413553 SFPQP23246 707 aaKnown RBP eCLIP10.39□□□□□ -0.75
SIK3-202ENST00000413553 CWF19L2Q2TBE0 894 aaKnown RBP10.39□□□□□ -0.75
SIK3-202ENST00000413553 E4F1Q66K89 784 aaPredicted RBP10.39□□□□□ -0.75
SIK3-202ENST00000413553 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.39□□□□□ -0.75
SIK3-202ENST00000413553 GUCY1B3Q02153 619 aa10.38□□□□□ -0.75
SIK3-202ENST00000413553 FAM160A1Q05DH4 1040 aa10.38□□□□□ -0.75
SIK3-202ENST00000413553 PDE4CQ08493 712 aa10.38□□□□□ -0.75
SIK3-202ENST00000413553 EDC3Q96F86 508 aaKnown RBP10.38□□□□□ -0.75
SIK3-202ENST00000413553 USP28Q96RU2 1077 aa10.38□□□□□ -0.75
SIK3-202ENST00000413553 ARGLU1Q9NWB6 273 aaPredicted RBP10.38□□□□□ -0.75
SIK3-202ENST00000413553 MAP3K2Q9Y2U5 619 aa10.38□□□□□ -0.75
SIK3-202ENST00000413553 PNMA6AP0CW24 399 aaPredicted RBP10.38□□□□□ -0.75
SIK3-202ENST00000413553 CYP2C19P33261 490 aa10.38□□□□□ -0.75
SIK3-202ENST00000413553 MTX1Q13505 466 aa10.38□□□□□ -0.75
SIK3-202ENST00000413553 KRT32Q14532 448 aa10.38□□□□□ -0.75
SIK3-202ENST00000413553 TMCO3Q6UWJ1 677 aa10.38□□□□□ -0.75
SIK3-202ENST00000413553 NBPF11Q86T75 865 aa10.38□□□□□ -0.75
SIK3-202ENST00000413553 CREBRFQ8IUR6 639 aa10.38□□□□□ -0.75
SIK3-202ENST00000413553 MNS1Q8NEH6 495 aa10.38□□□□□ -0.75
SIK3-202ENST00000413553 UBXN4Q92575 508 aa10.38□□□□□ -0.75
SIK3-202ENST00000413553 XPO4Q9C0E2 1151 aaKnown RBP10.38□□□□□ -0.75
SIK3-202ENST00000413553 ALDH8A1Q9H2A2 487 aaPredicted RBP10.38□□□□□ -0.75
SIK3-202ENST00000413553 IFNKQ9P0W0 207 aa10.38□□□□□ -0.75
SIK3-202ENST00000413553 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.38□□□□□ -0.755e-9■■□□□ 11.4
SIK3-202ENST00000413553 FHOD1Q9Y613 1164 aa10.38□□□□□ -0.75
SIK3-202ENST00000413553 LMO7Q8WWI1 1683 aa10.38□□□□□ -0.75
SIK3-202ENST00000413553 MED23Q9ULK4 1368 aa10.38□□□□□ -0.75
SIK3-202ENST00000413553 SASH1O94885 1247 aa10.37□□□□□ -0.75
SIK3-202ENST00000413553 HNRNPH2P55795 449 aaKnown RBP10.37□□□□□ -0.75
SIK3-202ENST00000413553 FAM193AP78312 1265 aa10.37□□□□□ -0.75
SIK3-202ENST00000413553 SCRN1Q12765 414 aa10.37□□□□□ -0.75
SIK3-202ENST00000413553 TEX35Q5T0J7 233 aa10.37□□□□□ -0.75
SIK3-202ENST00000413553 CCDC150Q8NCX0 1101 aa10.37□□□□□ -0.75
SIK3-202ENST00000413553 DNAJC2Q99543 621 aaKnown RBP10.37□□□□□ -0.75
SIK3-202ENST00000413553 L2HGDHQ9H9P8 463 aa10.37□□□□□ -0.75
SIK3-202ENST00000413553 DNAI1Q9UI46 699 aa10.37□□□□□ -0.75
SIK3-202ENST00000413553 AHDC1Q5TGY3 1603 aaPredicted RBP10.37□□□□□ -0.75
SIK3-202ENST00000413553 HOXB7P09629 217 aa10.37□□□□□ -0.75
SIK3-202ENST00000413553 NGLY1Q96IV0 654 aa10.37□□□□□ -0.75
SIK3-202ENST00000413553 IMPACTQ9P2X3 320 aa10.37□□□□□ -0.75
SIK3-202ENST00000413553 DBF4Q9UBU7 674 aaPredicted RBP10.37□□□□□ -0.75
SIK3-202ENST00000413553 OVOS2A0A0G2JMS6 1433 aa10.37□□□□□ -0.75
SIK3-202ENST00000413553 PHLPP1O60346 1717 aa10.37□□□□□ -0.75
SIK3-202ENST00000413553 PRAMEF22A3QJZ6 481 aa10.37□□□□□ -0.75
SIK3-202ENST00000413553 EXOC5O00471 708 aa10.37□□□□□ -0.75
SIK3-202ENST00000413553 ZNF396Q96N95 335 aaPredicted RBP10.37□□□□□ -0.75
SIK3-202ENST00000413553 C8orf37Q96NL8 207 aa10.37□□□□□ -0.75
SIK3-202ENST00000413553 OSBPL5Q9H0X9 879 aaPredicted RBP10.37□□□□□ -0.75
SIK3-202ENST00000413553 RCOR1Q9UKL0 485 aa10.37□□□□□ -0.75
SIK3-202ENST00000413553 BIN1O00499 593 aa10.36□□□□□ -0.75
SIK3-202ENST00000413553 KDM6AO15550 1401 aaPredicted RBP10.36□□□□□ -0.75
SIK3-202ENST00000413553 TAF5LO75529 589 aa10.36□□□□□ -0.75
SIK3-202ENST00000413553 ARMCX5Q6P1M9 558 aa10.36□□□□□ -0.75
SIK3-202ENST00000413553 CCDC129Q6ZRS4 1044 aa10.36□□□□□ -0.75
SIK3-202ENST00000413553 NEK11Q8NG66 645 aa10.36□□□□□ -0.75
SIK3-202ENST00000413553 A0A1B0GVL5 298 aa10.36□□□□□ -0.75
SIK3-202ENST00000413553 PTPDC1A2A3K4 754 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms