RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 RICTORQ6R327 1708 aa8.05□□□□□ -1.12
NOD1-203ENST00000413433 ATP10AO60312 1499 aa8.05□□□□□ -1.12
NOD1-203ENST00000413433 FMN1Q68DA7 1419 aa8.04□□□□□ -1.12
NOD1-203ENST00000413433 EFCAB5A4FU69 1503 aa8.04□□□□□ -1.12
NOD1-203ENST00000413433 MEN1O00255 615 aa8.04□□□□□ -1.12
NOD1-203ENST00000413433 CENPCQ03188 943 aa8.04□□□□□ -1.12
NOD1-203ENST00000413433 TAF1CQ15572 869 aaPredicted RBP8.04□□□□□ -1.12
NOD1-203ENST00000413433 TMEM214Q6NUQ4 689 aaKnown RBP8.04□□□□□ -1.12
NOD1-203ENST00000413433 ZNF662Q6ZS27 426 aa8.04□□□□□ -1.12
NOD1-203ENST00000413433 MCF2L2Q86YR7 1114 aa8.04□□□□□ -1.12
NOD1-203ENST00000413433 CCDC155Q8N6L0 562 aa8.04□□□□□ -1.12
NOD1-203ENST00000413433 GGNBP2Q9H3C7 697 aa8.04□□□□□ -1.12
NOD1-203ENST00000413433 FAM8A1Q9UBU6 413 aa8.04□□□□□ -1.12
NOD1-203ENST00000413433 MAGI2Q86UL8 1455 aa8.04□□□□□ -1.12
NOD1-203ENST00000413433 USP31Q70CQ4 1352 aa8.03□□□□□ -1.12
NOD1-203ENST00000413433 CBLBQ13191 982 aa8.03□□□□□ -1.12
NOD1-203ENST00000413433 BMS1Q14692 1282 aaKnown RBP8.03□□□□□ -1.12
NOD1-203ENST00000413433 C1orf53Q5VUE5 145 aa8.03□□□□□ -1.12
NOD1-203ENST00000413433 ZSCAN10Q96SZ4 725 aaPredicted RBP8.03□□□□□ -1.12
NOD1-203ENST00000413433 PIF1Q9H611 641 aa8.03□□□□□ -1.12
NOD1-203ENST00000413433 SRA1Q9HD15 236 aaKnown RBP8.03□□□□□ -1.12
NOD1-203ENST00000413433 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.03□□□□□ -1.12
NOD1-203ENST00000413433 ZMYM4Q5VZL5 1548 aa8.03□□□□□ -1.12
NOD1-203ENST00000413433 FGRP09769 529 aa8.02□□□□□ -1.13
NOD1-203ENST00000413433 HNRNPMP52272 730 aaKnown RBP eCLIP8.02□□□□□ -1.13
NOD1-203ENST00000413433 MEI1Q5TIA1 1274 aa8.02□□□□□ -1.13
NOD1-203ENST00000413433 CKAP2LQ8IYA6 745 aa8.02□□□□□ -1.13
NOD1-203ENST00000413433 RHPN1Q8TCX5 695 aa8.02□□□□□ -1.13
NOD1-203ENST00000413433 SNX29Q8TEQ0 813 aa8.02□□□□□ -1.13
NOD1-203ENST00000413433 CCDC74AQ96AQ1 378 aa8.02□□□□□ -1.13
NOD1-203ENST00000413433 GPRASP2Q96D09 838 aa8.02□□□□□ -1.13
NOD1-203ENST00000413433 FHDC1Q9C0D6 1143 aaPredicted RBP8.02□□□□□ -1.13
NOD1-203ENST00000413433 TBX22Q9Y458 520 aa8.02□□□□□ -1.13
NOD1-203ENST00000413433 HRH3Q9Y5N1 445 aa8.02□□□□□ -1.13
NOD1-203ENST00000413433 ARHGAP5Q13017 1502 aa8.02□□□□□ -1.13
NOD1-203ENST00000413433 TROQ12816 1431 aaPredicted RBP8.02□□□□□ -1.13
NOD1-203ENST00000413433 C9orf84Q5VXU9 1444 aa8.02□□□□□ -1.13
NOD1-203ENST00000413433 TRAPPC8Q9Y2L5 1435 aa8.02□□□□□ -1.13
NOD1-203ENST00000413433 CFAP74Q9C0B2 1584 aa8.01□□□□□ -1.13
NOD1-203ENST00000413433 KIF14Q15058 1648 aa8.01□□□□□ -1.13
NOD1-203ENST00000413433 ADAM23O75077 832 aa8.01□□□□□ -1.13
NOD1-203ENST00000413433 MICAL2O94851 1124 aa8.01□□□□□ -1.13
NOD1-203ENST00000413433 CLSTN1O94985 981 aa8.01□□□□□ -1.13
NOD1-203ENST00000413433 USP17L7P0C7H9 530 aa8.01□□□□□ -1.13
NOD1-203ENST00000413433 GJA8P48165 433 aa8.01□□□□□ -1.13
NOD1-203ENST00000413433 PAK2Q13177 524 aa8.01□□□□□ -1.13
NOD1-203ENST00000413433 NFE2L2Q16236 605 aa8.01□□□□□ -1.13
NOD1-203ENST00000413433 PI16Q6UXB8 463 aa8.01□□□□□ -1.13
NOD1-203ENST00000413433 SV2AQ7L0J3 742 aa8.01□□□□□ -1.13
NOD1-203ENST00000413433 PPARGC1BQ86YN6 1023 aaKnown RBP8.01□□□□□ -1.13
NOD1-203ENST00000413433 RHBDD1Q8TEB9 315 aa8.01□□□□□ -1.13
NOD1-203ENST00000413433 SRCIN1Q9C0H9 1055 aa8.01□□□□□ -1.13
NOD1-203ENST00000413433 FNDC3AQ9Y2H6 1198 aaKnown RBP8.01□□□□□ -1.13
NOD1-203ENST00000413433 FIGNL2A6NMB9 653 aa8□□□□□ -1.13
NOD1-203ENST00000413433 TGFBR3LH3BV60 316 aa8□□□□□ -1.13
NOD1-203ENST00000413433 MSTNO14793 375 aa8□□□□□ -1.13
NOD1-203ENST00000413433 TNFRSF21O75509 655 aa8□□□□□ -1.13
NOD1-203ENST00000413433 ATF4P18848 351 aaPredicted RBP8□□□□□ -1.13
NOD1-203ENST00000413433 ST13P50502 369 aaKnown RBP8□□□□□ -1.13
NOD1-203ENST00000413433 GNASQ5JWF2 1037 aa8□□□□□ -1.13
NOD1-203ENST00000413433 ZNF438Q7Z4V0 828 aa8□□□□□ -1.13
NOD1-203ENST00000413433 VWA5B2Q8N398 1253 aa8□□□□□ -1.13
NOD1-203ENST00000413433 EPS8L3Q8TE67 593 aaKnown RBP8□□□□□ -1.13
NOD1-203ENST00000413433 MRFAP1L1Q96HT8 127 aa8□□□□□ -1.13
NOD1-203ENST00000413433 CHMP4AQ9BY43 222 aa8□□□□□ -1.13
NOD1-203ENST00000413433 OSBPL7Q9BZF2 842 aa8□□□□□ -1.13
NOD1-203ENST00000413433 FOXD3Q9UJU5 478 aaPredicted RBP8□□□□□ -1.13
NOD1-203ENST00000413433 CLIP1P30622 1438 aa8□□□□□ -1.13
NOD1-203ENST00000413433 ZNF518AQ6AHZ1 1483 aa8□□□□□ -1.13
NOD1-203ENST00000413433 SBNO2Q9Y2G9 1366 aa7.99□□□□□ -1.13
NOD1-203ENST00000413433 ARHGEF12Q9NZN5 1544 aa7.99□□□□□ -1.13
NOD1-203ENST00000413433 SLC35F4A4IF30 521 aa7.99□□□□□ -1.13
NOD1-203ENST00000413433 PHACTR2O75167 634 aa7.99□□□□□ -1.13
NOD1-203ENST00000413433 SSBP05455 408 aaKnown RBP eCLIP7.99□□□□□ -1.13
NOD1-203ENST00000413433 ITGA6P23229 1130 aa7.99□□□□□ -1.13
NOD1-203ENST00000413433 PTGIRP43119 386 aa7.99□□□□□ -1.13
NOD1-203ENST00000413433 MAP3K10Q02779 954 aa7.99□□□□□ -1.13
NOD1-203ENST00000413433 NBPF1Q3BBV0 1214 aa7.99□□□□□ -1.13
NOD1-203ENST00000413433 USPL1Q5W0Q7 1092 aa7.99□□□□□ -1.13
NOD1-203ENST00000413433 NBPF10Q6P3W6 841 aaKnown RBP7.99□□□□□ -1.13
NOD1-203ENST00000413433 Q6ZVU0 165 aa7.99□□□□□ -1.13
NOD1-203ENST00000413433 CDC14CA4D256 554 aa7.98□□□□□ -1.13
NOD1-203ENST00000413433 GADD45BO75293 160 aaPredicted RBP7.98□□□□□ -1.13
NOD1-203ENST00000413433 TXLNAP40222 546 aa7.98□□□□□ -1.13
NOD1-203ENST00000413433 PLA2G4AP47712 749 aa7.98□□□□□ -1.13
NOD1-203ENST00000413433 EGFLAMQ63HQ2 1017 aa7.98□□□□□ -1.13
NOD1-203ENST00000413433 ILDR2Q71H61 639 aa7.98□□□□□ -1.13
NOD1-203ENST00000413433 ZNF295-AS1Q8N0V1 137 aa7.98□□□□□ -1.13
NOD1-203ENST00000413433 NPHS2Q9NP85 383 aa7.98□□□□□ -1.13
NOD1-203ENST00000413433 UHRF1BP1Q6BDS2 1440 aa7.97□□□□□ -1.13
NOD1-203ENST00000413433 IDH3AP50213 366 aa7.97□□□□□ -1.13
NOD1-203ENST00000413433 PDE12Q6L8Q7 609 aaKnown RBP7.97□□□□□ -1.13
NOD1-203ENST00000413433 ZNF746Q6NUN9 644 aaPredicted RBP7.97□□□□□ -1.13
NOD1-203ENST00000413433 AIDAQ96BJ3 306 aa7.97□□□□□ -1.13
NOD1-203ENST00000413433 AGBL1Q96MI9 1066 aa7.97□□□□□ -1.13
NOD1-203ENST00000413433 NEUROD4Q9HD90 331 aa7.97□□□□□ -1.13
NOD1-203ENST00000413433 TTF2Q9UNY4 1162 aaKnown RBP7.97□□□□□ -1.13
NOD1-203ENST00000413433 BCS1LQ9Y276 419 aa7.97□□□□□ -1.13
NOD1-203ENST00000413433 K7ELQ4 463 aaPredicted RBP7.96□□□□□ -1.14
NOD1-203ENST00000413433 SPINT1O43278 529 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms