RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 TSPYL1Q9H0U9 437 aa15.42■□□□□ 0.06
LITAF-203ENST00000413364 GREM2Q9H772 168 aa15.42■□□□□ 0.06
LITAF-203ENST00000413364 HELLSQ9NRZ9 838 aa15.42■□□□□ 0.06
LITAF-203ENST00000413364 RIPOR2Q9Y4F9 1068 aa15.42■□□□□ 0.06
LITAF-203ENST00000413364 RREB1Q92766 1687 aa15.42■□□□□ 0.06
LITAF-203ENST00000413364 RIC1Q4ADV7 1423 aa15.41■□□□□ 0.06
LITAF-203ENST00000413364 ANKRD18BA2A2Z9 1011 aa15.41■□□□□ 0.06
LITAF-203ENST00000413364 PDE8AO60658 829 aa15.41■□□□□ 0.06
LITAF-203ENST00000413364 CHGBP05060 677 aa15.41■□□□□ 0.06
LITAF-203ENST00000413364 CCDC158Q5M9N0 1113 aa15.41■□□□□ 0.06
LITAF-203ENST00000413364 GAS2L3Q86XJ1 694 aa15.41■□□□□ 0.06
LITAF-203ENST00000413364 XAGE2Q96GT9 111 aa15.41■□□□□ 0.06
LITAF-203ENST00000413364 SEC62Q99442 399 aaKnown RBP15.41■□□□□ 0.06
LITAF-203ENST00000413364 ALDH8A1Q9H2A2 487 aaPredicted RBP15.41■□□□□ 0.06
LITAF-203ENST00000413364 WDR33Q9C0J8 1336 aaKnown RBP15.41■□□□□ 0.06
LITAF-203ENST00000413364 LARGE1O95461 756 aa15.41■□□□□ 0.06
LITAF-203ENST00000413364 ADORA1P30542 326 aa15.41■□□□□ 0.06
LITAF-203ENST00000413364 KRT32Q14532 448 aa15.41■□□□□ 0.06
LITAF-203ENST00000413364 BLOC1S2Q6QNY1 142 aa15.41■□□□□ 0.06
LITAF-203ENST00000413364 CCDC129Q6ZRS4 1044 aa15.41■□□□□ 0.06
LITAF-203ENST00000413364 MYRIPQ8NFW9 859 aa15.41■□□□□ 0.06
LITAF-203ENST00000413364 SMARCC1Q92922 1105 aaPredicted RBP15.41■□□□□ 0.06
LITAF-203ENST00000413364 DDX49Q9Y6V7 483 aaKnown RBP15.41■□□□□ 0.06
LITAF-203ENST00000413364 HMGN5P82970 282 aaKnown RBP15.4■□□□□ 0.06
LITAF-203ENST00000413364 ITPK1Q13572 414 aa15.4■□□□□ 0.06
LITAF-203ENST00000413364 TTC39AQ5SRH9 613 aa15.4■□□□□ 0.06
LITAF-203ENST00000413364 ZMYM1Q5SVZ6 1142 aa15.4■□□□□ 0.06
LITAF-203ENST00000413364 GORABQ5T7V8 394 aa15.4■□□□□ 0.06
LITAF-203ENST00000413364 FOXD4L5Q5VV16 416 aaPredicted RBP15.4■□□□□ 0.06
LITAF-203ENST00000413364 LDHAL6AQ6ZMR3 332 aa15.4■□□□□ 0.06
LITAF-203ENST00000413364 FOXD4L4Q8WXT5 416 aaPredicted RBP15.4■□□□□ 0.06
LITAF-203ENST00000413364 AK7Q96M32 723 aa15.4■□□□□ 0.06
LITAF-203ENST00000413364 YY1AP1Q9H869 796 aa15.4■□□□□ 0.06
LITAF-203ENST00000413364 TAF6LQ9Y6J9 622 aa15.4■□□□□ 0.06
LITAF-203ENST00000413364 RPS6KB1P23443 525 aa15.4■□□□□ 0.06
LITAF-203ENST00000413364 METTL24Q5JXM2 366 aa15.4■□□□□ 0.06
LITAF-203ENST00000413364 MYH3P11055 1940 aa15.39■□□□□ 0.05
LITAF-203ENST00000413364 RNF113AO15541 343 aaKnown RBP15.39■□□□□ 0.05
LITAF-203ENST00000413364 ANKRD1Q15327 319 aa15.39■□□□□ 0.05
LITAF-203ENST00000413364 PRIMPOLQ96LW4 560 aa15.39■□□□□ 0.05
LITAF-203ENST00000413364 SMC3Q9UQE7 1217 aa15.39■□□□□ 0.05
LITAF-203ENST00000413364 ABCC12Q96J65 1359 aa15.39■□□□□ 0.05
LITAF-203ENST00000413364 ATP2B3Q16720 1220 aa15.38■□□□□ 0.05
LITAF-203ENST00000413364 ZKSCAN5Q9Y2L8 839 aa15.38■□□□□ 0.05
LITAF-203ENST00000413364 PRPF40AO75400 957 aaKnown RBP15.38■□□□□ 0.05
LITAF-203ENST00000413364 CAMTA2O94983 1202 aa15.38■□□□□ 0.05
LITAF-203ENST00000413364 GTF2F1P35269 517 aaKnown RBP eCLIP15.38■□□□□ 0.05
LITAF-203ENST00000413364 LRRFIP1Q32MZ4 808 aaKnown RBP15.38■□□□□ 0.05
LITAF-203ENST00000413364 ZNF771Q7L3S4 317 aaPredicted RBP15.38■□□□□ 0.05
LITAF-203ENST00000413364 CCDC83Q8IWF9 413 aa15.38■□□□□ 0.05
LITAF-203ENST00000413364 DSCC1Q9BVC3 393 aa15.38■□□□□ 0.05
LITAF-203ENST00000413364 CNNM1Q9NRU3 951 aa15.38■□□□□ 0.05
LITAF-203ENST00000413364 ZBTB22O15209 634 aa15.37■□□□□ 0.05
LITAF-203ENST00000413364 COL9A3Q14050 684 aaPredicted RBP15.37■□□□□ 0.05
LITAF-203ENST00000413364 VPS72Q15906 364 aa15.37■□□□□ 0.05
LITAF-203ENST00000413364 ME3Q16798 604 aa15.37■□□□□ 0.05
LITAF-203ENST00000413364 SUSD4Q5VX71 490 aa15.37■□□□□ 0.05
LITAF-203ENST00000413364 TPCN1Q9ULQ1 816 aa15.37■□□□□ 0.05
LITAF-203ENST00000413364 UBAP1LF5GYI3 381 aa15.37■□□□□ 0.05
LITAF-203ENST00000413364 KCNQ2O43526 872 aa15.37■□□□□ 0.05
LITAF-203ENST00000413364 FKBP4Q02790 459 aaKnown RBP eCLIP15.37■□□□□ 0.05
LITAF-203ENST00000413364 FAM98CQ17RN3 349 aaKnown RBP15.37■□□□□ 0.05
LITAF-203ENST00000413364 PARP10Q53GL7 1025 aa15.37■□□□□ 0.05
LITAF-203ENST00000413364 VGLL2Q8N8G2 317 aa15.37■□□□□ 0.05
LITAF-203ENST00000413364 CHAMP1Q96JM3 812 aa15.37■□□□□ 0.05
LITAF-203ENST00000413364 UTP14AQ9BVJ6 771 aaKnown RBP15.37■□□□□ 0.05
LITAF-203ENST00000413364 BCL9LQ86UU0 1499 aa15.37■□□□□ 0.05
LITAF-203ENST00000413364 LRP5O75197 1615 aa15.36■□□□□ 0.05
LITAF-203ENST00000413364 ST3GAL1Q11201 340 aa15.36■□□□□ 0.05
LITAF-203ENST00000413364 SLFNL1Q499Z3 407 aa15.36■□□□□ 0.05
LITAF-203ENST00000413364 MAST3O60307 1309 aa15.36■□□□□ 0.05
LITAF-203ENST00000413364 ZFYP08048 801 aaPredicted RBP15.36■□□□□ 0.05
LITAF-203ENST00000413364 CYP21A2P08686 494 aa15.36■□□□□ 0.05
LITAF-203ENST00000413364 HSP90B1P14625 803 aaKnown RBP15.36■□□□□ 0.05
LITAF-203ENST00000413364 NGLY1Q96IV0 654 aa15.36■□□□□ 0.05
LITAF-203ENST00000413364 C8orf37Q96NL8 207 aa15.36■□□□□ 0.05
LITAF-203ENST00000413364 NEK1Q96PY6 1258 aa15.36■□□□□ 0.05
LITAF-203ENST00000413364 STX6O43752 255 aa15.35■□□□□ 0.05
LITAF-203ENST00000413364 ZSCAN22P10073 491 aaPredicted RBP15.35■□□□□ 0.05
LITAF-203ENST00000413364 SYT1P21579 422 aa15.35■□□□□ 0.05
LITAF-203ENST00000413364 GABPB1Q06547 395 aaPredicted RBP15.35■□□□□ 0.05
LITAF-203ENST00000413364 TOB2Q14106 344 aaPredicted RBP15.35■□□□□ 0.05
LITAF-203ENST00000413364 SCARF1Q14162 830 aa15.35■□□□□ 0.05
LITAF-203ENST00000413364 ZNF622Q969S3 477 aaKnown RBP eCLIP15.35■□□□□ 0.05
LITAF-203ENST00000413364 ZNF512BQ96KM6 892 aaPredicted RBP15.35■□□□□ 0.05
LITAF-203ENST00000413364 GEMIN8Q9NWZ8 242 aaKnown RBP15.35■□□□□ 0.05
LITAF-203ENST00000413364 MYH14Q7Z406 1995 aaKnown RBP15.35■□□□□ 0.05
LITAF-203ENST00000413364 ZNF831Q5JPB2 1677 aa15.34■□□□□ 0.05
LITAF-203ENST00000413364 GJB2P29033 226 aa15.34■□□□□ 0.05
LITAF-203ENST00000413364 NECAB1Q8N987 351 aa15.34■□□□□ 0.05
LITAF-203ENST00000413364 TCEANC2Q96MN5 208 aa15.34■□□□□ 0.05
LITAF-203ENST00000413364 TIGD1Q96MW7 591 aa15.34■□□□□ 0.05
LITAF-203ENST00000413364 PDE8BO95263 885 aa15.34■□□□□ 0.05
LITAF-203ENST00000413364 HCLS1P14317 486 aaPredicted RBP15.34■□□□□ 0.05
LITAF-203ENST00000413364 ZAP70P43403 619 aa15.34■□□□□ 0.05
LITAF-203ENST00000413364 FEZ1Q99689 392 aa15.34■□□□□ 0.05
LITAF-203ENST00000413364 M0R2C6 588 aa15.33■□□□□ 0.05
LITAF-203ENST00000413364 HSPD1P10809 573 aaKnown RBP15.33■□□□□ 0.05
LITAF-203ENST00000413364 GPT2Q8TD30 523 aa15.33■□□□□ 0.05
LITAF-203ENST00000413364 OSBP2Q969R2 916 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms