RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 PTPRAP18433 802 aa5.6□□□□□ -1.51
HMGB3P2-201ENST00000411913 HOXA10P31260 410 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P2-201ENST00000411913 JAG1P78504 1218 aa5.6□□□□□ -1.51
HMGB3P2-201ENST00000411913 TRIP4Q15650 581 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P2-201ENST00000411913 COL13A1Q5TAT6 717 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P2-201ENST00000411913 OGFOD2Q6N063 350 aa5.6□□□□□ -1.51
HMGB3P2-201ENST00000411913 FDX2Q6P4F2 183 aa5.6□□□□□ -1.51
HMGB3P2-201ENST00000411913 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P2-201ENST00000411913 FOXD4L4Q8WXT5 416 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P2-201ENST00000411913 PPP1R12CQ9BZL4 782 aa5.6□□□□□ -1.51
HMGB3P2-201ENST00000411913 RASSF4Q9H2L5 321 aa5.6□□□□□ -1.51
HMGB3P2-201ENST00000411913 FAM13BQ9NYF5 915 aa5.6□□□□□ -1.51
HMGB3P2-201ENST00000411913 LEMD3Q9Y2U8 911 aa5.6□□□□□ -1.51
HMGB3P2-201ENST00000411913 A6NJR5 290 aa5.59□□□□□ -1.51
HMGB3P2-201ENST00000411913 EPHA1P21709 976 aa5.59□□□□□ -1.51
HMGB3P2-201ENST00000411913 BRD2P25440 801 aaKnown RBP5.59□□□□□ -1.51
HMGB3P2-201ENST00000411913 LMOD1P29536 600 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P2-201ENST00000411913 PREPP48147 710 aa5.59□□□□□ -1.51
HMGB3P2-201ENST00000411913 CABP4P57796 275 aa5.59□□□□□ -1.51
HMGB3P2-201ENST00000411913 ETFBKMTQ8IXQ9 262 aa5.59□□□□□ -1.51
HMGB3P2-201ENST00000411913 FBXL6Q8N531 539 aa5.59□□□□□ -1.51
HMGB3P2-201ENST00000411913 FAM200AQ8TCP9 573 aa5.59□□□□□ -1.51
HMGB3P2-201ENST00000411913 ASIC4Q96FT7 647 aa5.59□□□□□ -1.51
HMGB3P2-201ENST00000411913 CALR3Q96L12 384 aaKnown RBP5.59□□□□□ -1.51
HMGB3P2-201ENST00000411913 RNF208Q9H0X6 261 aa5.59□□□□□ -1.51
HMGB3P2-201ENST00000411913 FNDC3AQ9Y2H6 1198 aaKnown RBP5.59□□□□□ -1.51
HMGB3P2-201ENST00000411913 HIF3AQ9Y2N7 669 aa5.59□□□□□ -1.51
HMGB3P2-201ENST00000411913 TM4SF5O14894 197 aa5.58□□□□□ -1.52
HMGB3P2-201ENST00000411913 ADAM11O75078 769 aa5.58□□□□□ -1.52
HMGB3P2-201ENST00000411913 RXRBP28702 533 aa5.58□□□□□ -1.52
HMGB3P2-201ENST00000411913 NCAPG2Q86XI2 1143 aa5.58□□□□□ -1.52
HMGB3P2-201ENST00000411913 ARXQ96QS3 562 aa5.58□□□□□ -1.52
HMGB3P2-201ENST00000411913 RUSC1Q9BVN2 902 aa5.58□□□□□ -1.52
HMGB3P2-201ENST00000411913 OSBPL1AQ9BXW6 950 aa5.58□□□□□ -1.52
HMGB3P2-201ENST00000411913 PBX4Q9BYU1 374 aa5.58□□□□□ -1.52
HMGB3P2-201ENST00000411913 MAP4P27816 1152 aaKnown RBP5.57□□□□□ -1.52
HMGB3P2-201ENST00000411913 NLRP12P59046 1061 aa5.57□□□□□ -1.52
HMGB3P2-201ENST00000411913 FKBP5Q13451 457 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P2-201ENST00000411913 TP53INP2Q8IXH6 220 aa5.57□□□□□ -1.52
HMGB3P2-201ENST00000411913 H3BRJ5 948 aa5.56□□□□□ -1.52
HMGB3P2-201ENST00000411913 C8AP07357 584 aa5.56□□□□□ -1.52
HMGB3P2-201ENST00000411913 FOSL1P15407 271 aa5.56□□□□□ -1.52
HMGB3P2-201ENST00000411913 PIP4K2BP78356 416 aa5.56□□□□□ -1.52
HMGB3P2-201ENST00000411913 C16orf46Q6P387 395 aa5.56□□□□□ -1.52
HMGB3P2-201ENST00000411913 ADAMTSL4Q6UY14 1074 aa5.56□□□□□ -1.52
HMGB3P2-201ENST00000411913 SLC7A3Q8WY07 619 aa5.56□□□□□ -1.52
HMGB3P2-201ENST00000411913 WNT8BQ93098 351 aa5.56□□□□□ -1.52
HMGB3P2-201ENST00000411913 PRIMPOLQ96LW4 560 aa5.56□□□□□ -1.52
HMGB3P2-201ENST00000411913 FBXL18Q96ME1 805 aa5.56□□□□□ -1.52
HMGB3P2-201ENST00000411913 POP1Q99575 1024 aaKnown RBP5.56□□□□□ -1.52
HMGB3P2-201ENST00000411913 CCDC39Q9UFE4 941 aa5.56□□□□□ -1.52
HMGB3P2-201ENST00000411913 ARL4DP49703 201 aa5.55□□□□□ -1.52
HMGB3P2-201ENST00000411913 SGO2Q562F6 1265 aa5.55□□□□□ -1.52
HMGB3P2-201ENST00000411913 PROSER2Q86WR7 435 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P2-201ENST00000411913 POU5F2Q8N7G0 328 aa5.55□□□□□ -1.52
HMGB3P2-201ENST00000411913 COL26A1Q96A83 441 aa5.55□□□□□ -1.52
HMGB3P2-201ENST00000411913 ADAM19Q9H013 955 aa5.55□□□□□ -1.52
HMGB3P2-201ENST00000411913 SAP130Q9H0E3 1048 aa5.55□□□□□ -1.52
HMGB3P2-201ENST00000411913 OSGEPQ9NPF4 335 aa5.55□□□□□ -1.52
HMGB3P2-201ENST00000411913 ABI2Q9NYB9 513 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P2-201ENST00000411913 KIF4AO95239 1232 aa5.54□□□□□ -1.52
HMGB3P2-201ENST00000411913 F13BP05160 661 aa5.54□□□□□ -1.52
HMGB3P2-201ENST00000411913 CYP2E1P05181 493 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P2-201ENST00000411913 RFX1P22670 979 aa5.54□□□□□ -1.52
HMGB3P2-201ENST00000411913 MSMPQ1L6U9 139 aa5.54□□□□□ -1.52
HMGB3P2-201ENST00000411913 NUTM2GQ5VZR2 741 aa5.54□□□□□ -1.52
HMGB3P2-201ENST00000411913 VSIG10LQ86VR7 867 aa5.54□□□□□ -1.52
HMGB3P2-201ENST00000411913 CEP120Q8N960 986 aa5.54□□□□□ -1.52
HMGB3P2-201ENST00000411913 C12orf50Q8NA57 414 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P2-201ENST00000411913 GPR152Q8TDT2 470 aa5.54□□□□□ -1.52
HMGB3P2-201ENST00000411913 CLUAP1Q96AJ1 413 aa5.54□□□□□ -1.52
HMGB3P2-201ENST00000411913 KRTAP4-9Q9BYQ8 210 aa5.54□□□□□ -1.52
HMGB3P2-201ENST00000411913 ZMYND15Q9H091 742 aa5.54□□□□□ -1.52
HMGB3P2-201ENST00000411913 PRMT3O60678 531 aa5.53□□□□□ -1.52
HMGB3P2-201ENST00000411913 JUNBP17275 347 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P2-201ENST00000411913 ZAP70P43403 619 aa5.53□□□□□ -1.52
HMGB3P2-201ENST00000411913 NFKBIBQ15653 356 aa5.53□□□□□ -1.52
HMGB3P2-201ENST00000411913 CPSF6Q16630 551 aaKnown RBP eCLIP5.53□□□□□ -1.52
HMGB3P2-201ENST00000411913 PAOXQ6QHF9 649 aa5.53□□□□□ -1.52
HMGB3P2-201ENST00000411913 FAM95CA0A1B0GW59 222 aa5.52□□□□□ -1.53
HMGB3P2-201ENST00000411913 MEGF11A6BM72 1044 aa5.52□□□□□ -1.53
HMGB3P2-201ENST00000411913 CYP26A1O43174 497 aa5.52□□□□□ -1.53
HMGB3P2-201ENST00000411913 PRNPP04156 253 aa5.52□□□□□ -1.53
HMGB3P2-201ENST00000411913 USP11P51784 963 aa5.52□□□□□ -1.53
HMGB3P2-201ENST00000411913 CDCA8Q53HL2 280 aa5.52□□□□□ -1.53
HMGB3P2-201ENST00000411913 FAM26DQ5JW98 314 aa5.52□□□□□ -1.53
HMGB3P2-201ENST00000411913 CBLL1Q75N03 491 aa5.52□□□□□ -1.53
HMGB3P2-201ENST00000411913 FNBP4Q8N3X1 1017 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P2-201ENST00000411913 METTL22Q9BUU2 404 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P2-201ENST00000411913 BSDC1Q9NW68 430 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P2-201ENST00000411913 KANSL3Q9P2N6 904 aa5.52□□□□□ -1.53
HMGB3P2-201ENST00000411913 C19orf57Q0VDD7 668 aa5.51□□□□□ -1.53
HMGB3P2-201ENST00000411913 FLCNQ8NFG4 579 aa5.51□□□□□ -1.53
HMGB3P2-201ENST00000411913 MKNK1Q9BUB5 465 aa5.51□□□□□ -1.53
HMGB3P2-201ENST00000411913 ELP3Q9H9T3 547 aa5.51□□□□□ -1.53
HMGB3P2-201ENST00000411913 CYP4F12Q9HCS2 524 aa5.51□□□□□ -1.53
HMGB3P2-201ENST00000411913 NOVA2Q9UNW9 492 aaKnown RBP5.51□□□□□ -1.53
HMGB3P2-201ENST00000411913 PDE2AO00408 941 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P2-201ENST00000411913 ITGB5P18084 799 aa5.5□□□□□ -1.53
HMGB3P2-201ENST00000411913 NAA30Q147X3 362 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms