RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 C15orf52Q6ZUT6 534 aaKnown RBP20.39■□□□□ 0.85
NOD1-202ENST00000411552 COA1Q9GZY4 146 aa20.39■□□□□ 0.85
NOD1-202ENST00000411552 ZBTB12Q9Y330 459 aaPredicted RBP20.39■□□□□ 0.85
NOD1-202ENST00000411552 CEP350Q5VT06 3117 aa20.39■□□□□ 0.85
NOD1-202ENST00000411552 VIL1P09327 827 aaKnown RBP20.38■□□□□ 0.85
NOD1-202ENST00000411552 METTL24Q5JXM2 366 aa20.38■□□□□ 0.85
NOD1-202ENST00000411552 PNMA8AQ86V59 439 aaPredicted RBP20.38■□□□□ 0.85
NOD1-202ENST00000411552 ADAMTSL1Q8N6G6 1762 aa20.38■□□□□ 0.85
NOD1-202ENST00000411552 EYA2O00167 538 aa20.37■□□□□ 0.85
NOD1-202ENST00000411552 MTX1Q13505 466 aa20.37■□□□□ 0.85
NOD1-202ENST00000411552 UBE4AQ14139 1066 aa20.37■□□□□ 0.85
NOD1-202ENST00000411552 LDHDQ86WU2 507 aa20.37■□□□□ 0.85
NOD1-202ENST00000411552 VGLL2Q8N8G2 317 aa20.37■□□□□ 0.85
NOD1-202ENST00000411552 ZNF646O15015 1829 aaPredicted RBP20.37■□□□□ 0.85
NOD1-202ENST00000411552 SHTN1A0MZ66 631 aa20.36■□□□□ 0.85
NOD1-202ENST00000411552 USP17L3A6NCW0 530 aa20.36■□□□□ 0.85
NOD1-202ENST00000411552 USP17L4A6NCW7 530 aa20.36■□□□□ 0.85
NOD1-202ENST00000411552 ZBTB7BO15156 539 aaPredicted RBP20.36■□□□□ 0.85
NOD1-202ENST00000411552 SRGAP3O43295 1099 aa20.36■□□□□ 0.85
NOD1-202ENST00000411552 MS4A1P11836 297 aa20.36■□□□□ 0.85
NOD1-202ENST00000411552 RPS12P25398 132 aaKnown RBP20.36■□□□□ 0.85
NOD1-202ENST00000411552 CHADLQ6NUI6 762 aa20.36■□□□□ 0.85
NOD1-202ENST00000411552 USP17L1Q7RTZ2 530 aa20.36■□□□□ 0.85
NOD1-202ENST00000411552 ATG9AQ7Z3C6 839 aa20.36■□□□□ 0.85
NOD1-202ENST00000411552 DPF2Q92785 391 aa20.36■□□□□ 0.85
NOD1-202ENST00000411552 SIL1Q9H173 461 aa20.36■□□□□ 0.85
NOD1-202ENST00000411552 CNOT7Q9UIV1 285 aaKnown RBP20.36■□□□□ 0.85
NOD1-202ENST00000411552 PA2G4Q9UQ80 394 aaKnown RBP20.36■□□□□ 0.85
NOD1-202ENST00000411552 MICALL2Q8IY33 904 aa20.35■□□□□ 0.85
NOD1-202ENST00000411552 COPRSQ9NQ92 184 aa20.35■□□□□ 0.85
NOD1-202ENST00000411552 ADARB2Q9NS39 739 aaKnown RBP20.35■□□□□ 0.85
NOD1-202ENST00000411552 CIAO1O76071 339 aa20.34■□□□□ 0.85
NOD1-202ENST00000411552 PDE8BO95263 885 aa20.34■□□□□ 0.85
NOD1-202ENST00000411552 HSPA6P17066 643 aa20.34■□□□□ 0.85
NOD1-202ENST00000411552 RSBN1LQ6PCB5 846 aaPredicted RBP20.34■□□□□ 0.85
NOD1-202ENST00000411552 USP50Q70EL3 339 aaPredicted RBP20.34■□□□□ 0.85
NOD1-202ENST00000411552 ZNF804AQ7Z570 1209 aa20.34■□□□□ 0.85
NOD1-202ENST00000411552 CD209Q9NNX6 404 aa20.34■□□□□ 0.85
NOD1-202ENST00000411552 FBXO3Q9UK99 471 aa20.34■□□□□ 0.85
NOD1-202ENST00000411552 ZNF609O15014 1411 aa20.34■□□□□ 0.85
NOD1-202ENST00000411552 FBXW7Q969H0 707 aa20.33■□□□□ 0.85
NOD1-202ENST00000411552 C1orf115Q9H7X2 142 aa20.33■□□□□ 0.85
NOD1-202ENST00000411552 CLEC11AQ9Y240 323 aa20.33■□□□□ 0.85
NOD1-202ENST00000411552 PNMA6EA0A0J9YXQ4 647 aa20.32■□□□□ 0.84
NOD1-202ENST00000411552 H7C1D1 291 aa20.32■□□□□ 0.84
NOD1-202ENST00000411552 DACT2Q5SW24 774 aa20.32■□□□□ 0.84
NOD1-202ENST00000411552 STRIP1Q5VSL9 837 aa20.32■□□□□ 0.84
NOD1-202ENST00000411552 AGBL3Q8NEM8 1001 aa20.32■□□□□ 0.84
NOD1-202ENST00000411552 GMLQ99445 158 aa20.32■□□□□ 0.84
NOD1-202ENST00000411552 IL1R1P14778 569 aa20.31■□□□□ 0.84
NOD1-202ENST00000411552 GYG1P46976 350 aa20.31■□□□□ 0.84
NOD1-202ENST00000411552 MVPQ14764 893 aaKnown RBP20.31■□□□□ 0.84
NOD1-202ENST00000411552 PUM3Q15397 648 aaKnown RBP20.31■□□□□ 0.84
NOD1-202ENST00000411552 TTLL5Q6EMB2 1281 aa20.31■□□□□ 0.84
NOD1-202ENST00000411552 TRPM4Q8TD43 1214 aa20.31■□□□□ 0.84
NOD1-202ENST00000411552 FAM84BQ96KN1 310 aaPredicted RBP20.31■□□□□ 0.84
NOD1-202ENST00000411552 MXD3Q9BW11 206 aa20.31■□□□□ 0.84
NOD1-202ENST00000411552 FGFR2P21802 821 aa20.3■□□□□ 0.84
NOD1-202ENST00000411552 IL15P40933 162 aaPredicted RBP20.3■□□□□ 0.84
NOD1-202ENST00000411552 HIRAP54198 1017 aaPredicted RBP20.3■□□□□ 0.84
NOD1-202ENST00000411552 GTF2IP78347 998 aa20.3■□□□□ 0.84
NOD1-202ENST00000411552 MAP1SQ66K74 1059 aaPredicted RBP20.3■□□□□ 0.84
NOD1-202ENST00000411552 SAMD7Q7Z3H4 446 aa20.3■□□□□ 0.84
NOD1-202ENST00000411552 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.3■□□□□ 0.84
NOD1-202ENST00000411552 COG6Q9Y2V7 657 aa20.3■□□□□ 0.84
NOD1-202ENST00000411552 EGFRP00533 1210 aa20.29■□□□□ 0.84
NOD1-202ENST00000411552 HIBADHP31937 336 aaKnown RBP20.29■□□□□ 0.84
NOD1-202ENST00000411552 C20orf194Q5TEA3 1177 aa20.29■□□□□ 0.84
NOD1-202ENST00000411552 IFFO2Q5TF58 517 aa20.29■□□□□ 0.84
NOD1-202ENST00000411552 CEP126Q9P2H0 1117 aa20.29■□□□□ 0.84
NOD1-202ENST00000411552 USP17L8P0C7I0 530 aa20.28■□□□□ 0.84
NOD1-202ENST00000411552 ZNF280AP59817 542 aaPredicted RBP20.28■□□□□ 0.84
NOD1-202ENST00000411552 ATP8B2P98198 1209 aa20.28■□□□□ 0.84
NOD1-202ENST00000411552 POLA2Q14181 598 aa20.28■□□□□ 0.84
NOD1-202ENST00000411552 PDE3AQ14432 1141 aa20.28■□□□□ 0.84
NOD1-202ENST00000411552 TBC1D10BQ4KMP7 808 aaPredicted RBP20.28■□□□□ 0.84
NOD1-202ENST00000411552 FBXO33Q7Z6M2 555 aa20.28■□□□□ 0.84
NOD1-202ENST00000411552 MYO3BQ8WXR4 1341 aa20.27■□□□□ 0.84
NOD1-202ENST00000411552 ITGBL1O95965 494 aaPredicted RBP20.27■□□□□ 0.84
NOD1-202ENST00000411552 IFIT1P09914 478 aaKnown RBP20.27■□□□□ 0.84
NOD1-202ENST00000411552 SLC5A1P13866 664 aa20.27■□□□□ 0.84
NOD1-202ENST00000411552 CNTROBQ8N137 903 aa20.27■□□□□ 0.84
NOD1-202ENST00000411552 TDRD7Q8NHU6 1098 aaKnown RBP20.27■□□□□ 0.84
NOD1-202ENST00000411552 SSH3Q8TE77 659 aa20.27■□□□□ 0.84
NOD1-202ENST00000411552 LPIN2Q92539 896 aa20.27■□□□□ 0.84
NOD1-202ENST00000411552 DDX19BQ9UMR2 479 aa20.27■□□□□ 0.84
NOD1-202ENST00000411552 SASH1O94885 1247 aa20.26■□□□□ 0.83
NOD1-202ENST00000411552 BCAMP50895 628 aa20.26■□□□□ 0.83
NOD1-202ENST00000411552 APLP1P51693 650 aa20.26■□□□□ 0.83
NOD1-202ENST00000411552 ATP2B3Q16720 1220 aa20.26■□□□□ 0.83
NOD1-202ENST00000411552 KIF4BQ2VIQ3 1234 aa20.26■□□□□ 0.83
NOD1-202ENST00000411552 CAVIN4Q5BKX8 364 aa20.26■□□□□ 0.83
NOD1-202ENST00000411552 RBM26Q5T8P6 1007 aaKnown RBP20.26■□□□□ 0.83
NOD1-202ENST00000411552 VPS37DQ86XT2 251 aa20.26■□□□□ 0.83
NOD1-202ENST00000411552 PGAP2Q9UHJ9 254 aa20.26■□□□□ 0.83
NOD1-202ENST00000411552 JAG2Q9Y219 1238 aa20.26■□□□□ 0.83
NOD1-202ENST00000411552 PASKQ96RG2 1323 aa20.26■□□□□ 0.83
NOD1-202ENST00000411552 CEP85Q6P2H3 762 aa20.25■□□□□ 0.83
NOD1-202ENST00000411552 CERS5Q8N5B7 392 aa20.25■□□□□ 0.83
NOD1-202ENST00000411552 ZC3H15Q8WU90 426 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms