RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 PUM3Q15397 648 aaKnown RBP10.41□□□□□ -0.74
PBRM1-208ENST00000410007 ZRSR2Q15696 482 aaKnown RBP10.41□□□□□ -0.74
PBRM1-208ENST00000410007 SMARCC2Q8TAQ2 1214 aa10.41□□□□□ -0.74
PBRM1-208ENST00000410007 UBXN4Q92575 508 aa10.41□□□□□ -0.74
PBRM1-208ENST00000410007 SNX21Q969T3 373 aa10.41□□□□□ -0.74
PBRM1-208ENST00000410007 EXOC1Q9NV70 894 aa10.41□□□□□ -0.74
PBRM1-208ENST00000410007 LIG1P18858 919 aa10.41□□□□□ -0.74
PBRM1-208ENST00000410007 FAM98CQ17RN3 349 aaKnown RBP10.41□□□□□ -0.74
PBRM1-208ENST00000410007 KLHL40Q2TBA0 621 aa10.41□□□□□ -0.74
PBRM1-208ENST00000410007 CREB3L3Q68CJ9 461 aa10.41□□□□□ -0.74
PBRM1-208ENST00000410007 DHX32Q7L7V1 743 aaKnown RBP10.41□□□□□ -0.74
PBRM1-208ENST00000410007 CLEC11AQ9Y240 323 aa10.41□□□□□ -0.74
PBRM1-208ENST00000410007 ERVV-2B6SEH9 535 aa10.41□□□□□ -0.74
PBRM1-208ENST00000410007 RRP36Q96EU6 259 aaKnown RBP10.41□□□□□ -0.74
PBRM1-208ENST00000410007 GBP3Q9H0R5 595 aa10.41□□□□□ -0.74
PBRM1-208ENST00000410007 A0A1B0GUL7 405 aa10.41□□□□□ -0.74
PBRM1-208ENST00000410007 TRIM75PA6NK02 468 aa10.4□□□□□ -0.74
PBRM1-208ENST00000410007 CHMLP26374 656 aa10.4□□□□□ -0.74
PBRM1-208ENST00000410007 HIBADHP31937 336 aaKnown RBP10.4□□□□□ -0.74
PBRM1-208ENST00000410007 PLXNC1O60486 1568 aa10.4□□□□□ -0.74
PBRM1-208ENST00000410007 A1BGP04217 495 aa10.4□□□□□ -0.74
PBRM1-208ENST00000410007 CERS3Q8IU89 383 aa10.4□□□□□ -0.74
PBRM1-208ENST00000410007 H0YHG0 523 aa10.4□□□□□ -0.74
PBRM1-208ENST00000410007 UFL1O94874 794 aa10.4□□□□□ -0.74
PBRM1-208ENST00000410007 HCLS1P14317 486 aaPredicted RBP10.4□□□□□ -0.74
PBRM1-208ENST00000410007 LEKR1Q6ZMV7 388 aa10.4□□□□□ -0.74
PBRM1-208ENST00000410007 TRMT1LQ7Z2T5 733 aaKnown RBP10.4□□□□□ -0.74
PBRM1-208ENST00000410007 USP37Q86T82 979 aa10.4□□□□□ -0.74
PBRM1-208ENST00000410007 DNAJC10Q8IXB1 793 aa10.4□□□□□ -0.74
PBRM1-208ENST00000410007 MRPS27Q92552 414 aaKnown RBP10.4□□□□□ -0.74
PBRM1-208ENST00000410007 USP21Q9UK80 565 aa10.4□□□□□ -0.74
PBRM1-208ENST00000410007 TRIM35Q9UPQ4 493 aa10.4□□□□□ -0.74
PBRM1-208ENST00000410007 YEATS2Q9ULM3 1422 aa10.4□□□□□ -0.74
PBRM1-208ENST00000410007 SPDYE3A6NKU9 549 aa10.4□□□□□ -0.75
PBRM1-208ENST00000410007 GNA11P29992 359 aa10.4□□□□□ -0.75
PBRM1-208ENST00000410007 STAT6P42226 847 aa10.4□□□□□ -0.75
PBRM1-208ENST00000410007 KIF18AQ8NI77 898 aa10.4□□□□□ -0.75
PBRM1-208ENST00000410007 USP25Q9UHP3 1055 aa10.4□□□□□ -0.75
PBRM1-208ENST00000410007 KIF4BQ2VIQ3 1234 aa10.39□□□□□ -0.75
PBRM1-208ENST00000410007 TNNI3KQ59H18 835 aa10.39□□□□□ -0.75
PBRM1-208ENST00000410007 CCDC174Q6PII3 467 aa10.39□□□□□ -0.75
PBRM1-208ENST00000410007 TRIM47Q96LD4 638 aa10.39□□□□□ -0.75
PBRM1-208ENST00000410007 SH2D4AQ9H788 454 aa10.39□□□□□ -0.75
PBRM1-208ENST00000410007 GGA1Q9UJY5 639 aa10.39□□□□□ -0.75
PBRM1-208ENST00000410007 FPGT-TNNI3KV9GXZ4 949 aa10.39□□□□□ -0.75
PBRM1-208ENST00000410007 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.39□□□□□ -0.75
PBRM1-208ENST00000410007 MAST3O60307 1309 aa10.39□□□□□ -0.75
PBRM1-208ENST00000410007 SBNO2Q9Y2G9 1366 aa10.39□□□□□ -0.75
PBRM1-208ENST00000410007 MBD4O95243 580 aa10.39□□□□□ -0.75
PBRM1-208ENST00000410007 SPAG1Q07617 926 aa10.39□□□□□ -0.75
PBRM1-208ENST00000410007 UVSSAQ2YD98 709 aa10.39□□□□□ -0.75
PBRM1-208ENST00000410007 ZNF496Q96IT1 587 aaPredicted RBP10.39□□□□□ -0.75
PBRM1-208ENST00000410007 LMOD1P29536 600 aaPredicted RBP10.39□□□□□ -0.75
PBRM1-208ENST00000410007 TEX11Q8IYF3 940 aa10.39□□□□□ -0.75
PBRM1-208ENST00000410007 CPLX3Q8WVH0 158 aa10.39□□□□□ -0.75
PBRM1-208ENST00000410007 PAFAH1B1P43034 410 aa10.39□□□□□ -0.75
PBRM1-208ENST00000410007 TIMM10P62072 90 aa10.39□□□□□ -0.75
PBRM1-208ENST00000410007 ENOX2Q16206 610 aaKnown RBP10.39□□□□□ -0.75
PBRM1-208ENST00000410007 RBM26Q5T8P6 1007 aaKnown RBP10.39□□□□□ -0.75
PBRM1-208ENST00000410007 AOX1Q06278 1338 aa10.39□□□□□ -0.75
PBRM1-208ENST00000410007 INSRP06213 1382 aa10.38□□□□□ -0.75
PBRM1-208ENST00000410007 CENPHQ9H3R5 247 aa10.38□□□□□ -0.75
PBRM1-208ENST00000410007 RBM28Q9NW13 759 aaKnown RBP10.38□□□□□ -0.75
PBRM1-208ENST00000410007 KIAA0232Q92628 1395 aa10.38□□□□□ -0.75
PBRM1-208ENST00000410007 F13A1P00488 732 aa10.38□□□□□ -0.75
PBRM1-208ENST00000410007 EIF4A1P60842 406 aaKnown RBP10.38□□□□□ -0.75
PBRM1-208ENST00000410007 GCKRQ14397 625 aa10.38□□□□□ -0.75
PBRM1-208ENST00000410007 WDR66Q8TBY9 1149 aa10.38□□□□□ -0.75
PBRM1-208ENST00000410007 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.38□□□□□ -0.75
PBRM1-208ENST00000410007 MAGI2Q86UL8 1455 aa10.38□□□□□ -0.75
PBRM1-208ENST00000410007 USP19O94966 1318 aa10.38□□□□□ -0.75
PBRM1-208ENST00000410007 CCDC172P0C7W6 258 aa10.38□□□□□ -0.75
PBRM1-208ENST00000410007 BICD1Q96G01 975 aa10.38□□□□□ -0.75
PBRM1-208ENST00000410007 GTPBP4Q9BZE4 634 aaKnown RBP10.38□□□□□ -0.75
PBRM1-208ENST00000410007 GOLGA6L9A6NEM1 432 aa10.38□□□□□ -0.75
PBRM1-208ENST00000410007 N4BP3O15049 544 aa10.38□□□□□ -0.75
PBRM1-208ENST00000410007 GBP2P32456 591 aaPredicted RBP10.38□□□□□ -0.75
PBRM1-208ENST00000410007 TMC6Q7Z403 805 aa10.38□□□□□ -0.75
PBRM1-208ENST00000410007 LPIN2Q92539 896 aa10.38□□□□□ -0.75
PBRM1-208ENST00000410007 TSPYL1Q9H0U9 437 aa10.38□□□□□ -0.75
PBRM1-208ENST00000410007 TARBP1Q13395 1621 aaKnown RBP10.38□□□□□ -0.75
PBRM1-208ENST00000410007 USP8P40818 1118 aa10.37□□□□□ -0.75
PBRM1-208ENST00000410007 AK2P54819 239 aa10.37□□□□□ -0.75
PBRM1-208ENST00000410007 RRAGBQ5VZM2 374 aa10.37□□□□□ -0.75
PBRM1-208ENST00000410007 KRT79Q5XKE5 535 aa10.37□□□□□ -0.75
PBRM1-208ENST00000410007 RUFY3Q7L099 469 aa10.37□□□□□ -0.75
PBRM1-208ENST00000410007 DDX17Q92841 729 aaKnown RBP10.37□□□□□ -0.75
PBRM1-208ENST00000410007 PLEKHG1Q9ULL1 1385 aa10.37□□□□□ -0.75
PBRM1-208ENST00000410007 ANKRD62A6NC57 917 aa10.37□□□□□ -0.75
PBRM1-208ENST00000410007 SPTLC2O15270 562 aa10.37□□□□□ -0.75
PBRM1-208ENST00000410007 CASQ1P31415 396 aa10.37□□□□□ -0.75
PBRM1-208ENST00000410007 KRT2P35908 639 aa10.37□□□□□ -0.75
PBRM1-208ENST00000410007 BRAPQ7Z569 592 aa10.37□□□□□ -0.75
PBRM1-208ENST00000410007 APPBP2Q92624 585 aa10.37□□□□□ -0.75
PBRM1-208ENST00000410007 XAGE2Q96GT9 111 aa10.37□□□□□ -0.75
PBRM1-208ENST00000410007 INTS4Q96HW7 963 aaKnown RBP10.37□□□□□ -0.75
PBRM1-208ENST00000410007 DBNDD2Q9BQY9 259 aa10.37□□□□□ -0.75
PBRM1-208ENST00000410007 PSMA7O14818 248 aa10.37□□□□□ -0.75
PBRM1-208ENST00000410007 MCM3P25205 808 aa10.37□□□□□ -0.75
PBRM1-208ENST00000410007 APOBRQ0VD83 1088 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms