RNA–Protein interactions for RNA: ENST00000409884.5

LRRTM4-204, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRTM4, Length 2,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-204ENST00000409884 TAF5LO75529 589 aa12.88□□□□□ -0.35
LRRTM4-204ENST00000409884 HMGB1P09429 215 aaKnown RBP12.88□□□□□ -0.35
LRRTM4-204ENST00000409884 ZNF827Q17R98 1081 aa12.88□□□□□ -0.35
LRRTM4-204ENST00000409884 NBPF5PQ86XG9 351 aaPredicted RBP12.88□□□□□ -0.35
LRRTM4-204ENST00000409884 UBR3Q6ZT12 1888 aa12.88□□□□□ -0.35
LRRTM4-204ENST00000409884 NFIXQ14938 502 aa12.88□□□□□ -0.35
LRRTM4-204ENST00000409884 FAM227BQ96M60 508 aa12.88□□□□□ -0.35
LRRTM4-204ENST00000409884 ANO2Q9NQ90 1003 aa12.88□□□□□ -0.35
LRRTM4-204ENST00000409884 GEMIN8Q9NWZ8 242 aaKnown RBP12.88□□□□□ -0.35
LRRTM4-204ENST00000409884 SPEF2Q9C093 1822 aa12.87□□□□□ -0.35
LRRTM4-204ENST00000409884 CD2BP2O95400 341 aaKnown RBP12.87□□□□□ -0.35
LRRTM4-204ENST00000409884 PI16Q6UXB8 463 aa12.87□□□□□ -0.35
LRRTM4-204ENST00000409884 DDX46Q7L014 1031 aaKnown RBP12.87□□□□□ -0.35
LRRTM4-204ENST00000409884 SNRKQ9NRH2 765 aa12.87□□□□□ -0.35
LRRTM4-204ENST00000409884 CGNQ9P2M7 1197 aaKnown RBP12.87□□□□□ -0.35
LRRTM4-204ENST00000409884 ATP5JP18859 108 aa12.86□□□□□ -0.35
LRRTM4-204ENST00000409884 SCARF1Q14162 830 aa12.86□□□□□ -0.35
LRRTM4-204ENST00000409884 TMEM132AQ24JP5 1023 aa12.86□□□□□ -0.35
LRRTM4-204ENST00000409884 SLC27A3Q5K4L6 730 aa12.86□□□□□ -0.35
LRRTM4-204ENST00000409884 VGLL2Q8N8G2 317 aa12.86□□□□□ -0.35
LRRTM4-204ENST00000409884 SPRYD3Q8NCJ5 442 aa12.86□□□□□ -0.35
LRRTM4-204ENST00000409884 XAGE2Q96GT9 111 aa12.86□□□□□ -0.35
LRRTM4-204ENST00000409884 TBC1D2Q9BYX2 928 aa12.86□□□□□ -0.35
LRRTM4-204ENST00000409884 PANK2Q9BZ23 570 aa12.86□□□□□ -0.35
LRRTM4-204ENST00000409884 OFD1O75665 1012 aa12.86□□□□□ -0.35
LRRTM4-204ENST00000409884 GYS1P13807 737 aa12.86□□□□□ -0.35
LRRTM4-204ENST00000409884 ANTXR1Q9H6X2 564 aa12.86□□□□□ -0.35
LRRTM4-204ENST00000409884 CCDC152Q4G0S7 254 aa12.85□□□□□ -0.35
LRRTM4-204ENST00000409884 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.85□□□□□ -0.35
LRRTM4-204ENST00000409884 EVI5LQ96CN4 794 aa12.85□□□□□ -0.35
LRRTM4-204ENST00000409884 FSD1Q9BTV5 496 aa12.85□□□□□ -0.35
LRRTM4-204ENST00000409884 PALD1Q9ULE6 856 aa12.85□□□□□ -0.35
LRRTM4-204ENST00000409884 CASZ1Q86V15 1759 aa12.85□□□□□ -0.35
LRRTM4-204ENST00000409884 A0A0D9SFI3 127 aa12.85□□□□□ -0.35
LRRTM4-204ENST00000409884 GOLIM4O00461 696 aa12.85□□□□□ -0.35
LRRTM4-204ENST00000409884 KCNA4P22459 653 aa12.85□□□□□ -0.35
LRRTM4-204ENST00000409884 ATP2B3Q16720 1220 aa12.85□□□□□ -0.35
LRRTM4-204ENST00000409884 CELF1Q92879 486 aaKnown RBP12.85□□□□□ -0.35
LRRTM4-204ENST00000409884 MPHOSPH8Q99549 860 aa12.85□□□□□ -0.35
LRRTM4-204ENST00000409884 DIAPH3Q9NSV4 1193 aa12.85□□□□□ -0.35
LRRTM4-204ENST00000409884 TFCP2L1Q9NZI6 479 aa12.85□□□□□ -0.35
LRRTM4-204ENST00000409884 NPHP1O15259 732 aa12.84□□□□□ -0.35
LRRTM4-204ENST00000409884 SGSM2O43147 1006 aa12.84□□□□□ -0.35
LRRTM4-204ENST00000409884 REC8O95072 547 aa12.84□□□□□ -0.35
LRRTM4-204ENST00000409884 PDE8BO95263 885 aa12.84□□□□□ -0.35
LRRTM4-204ENST00000409884 NMIQ13287 307 aaPredicted RBP12.84□□□□□ -0.35
LRRTM4-204ENST00000409884 GPR108Q9NPR9 543 aa12.84□□□□□ -0.35
LRRTM4-204ENST00000409884 GORABQ5T7V8 394 aa12.84□□□□□ -0.35
LRRTM4-204ENST00000409884 HAUS7Q99871 368 aa12.84□□□□□ -0.35
LRRTM4-204ENST00000409884 FKBP4Q02790 459 aaKnown RBP eCLIP12.83□□□□□ -0.36
LRRTM4-204ENST00000409884 PTH1RQ03431 593 aa12.83□□□□□ -0.36
LRRTM4-204ENST00000409884 TPTE2Q6XPS3 522 aa12.83□□□□□ -0.36
LRRTM4-204ENST00000409884 CHMP4CQ96CF2 233 aa12.83□□□□□ -0.36
LRRTM4-204ENST00000409884 SEC62Q99442 399 aaKnown RBP12.83□□□□□ -0.36
LRRTM4-204ENST00000409884 LAMB2P55268 1798 aa12.83□□□□□ -0.36
LRRTM4-204ENST00000409884 PLSCR1O15162 318 aa12.82□□□□□ -0.36
LRRTM4-204ENST00000409884 IFIT1P09914 478 aaKnown RBP12.82□□□□□ -0.36
LRRTM4-204ENST00000409884 EN1Q05925 392 aaPredicted RBP12.82□□□□□ -0.36
LRRTM4-204ENST00000409884 COL24A1Q17RW2 1714 aa12.82□□□□□ -0.36
LRRTM4-204ENST00000409884 TNRC6CQ9HCJ0 1690 aaKnown RBP12.82□□□□□ -0.36
LRRTM4-204ENST00000409884 PHKA1P46020 1223 aa12.82□□□□□ -0.36
LRRTM4-204ENST00000409884 CHRNDQ07001 517 aa12.82□□□□□ -0.36
LRRTM4-204ENST00000409884 DDR1Q08345 913 aa12.82□□□□□ -0.36
LRRTM4-204ENST00000409884 SF3B3Q15393 1217 aaKnown RBP12.82□□□□□ -0.36
LRRTM4-204ENST00000409884 SLC10A5Q5PT55 438 aa12.82□□□□□ -0.36
LRRTM4-204ENST00000409884 ZNF589Q86UQ0 364 aaPredicted RBP12.82□□□□□ -0.36
LRRTM4-204ENST00000409884 COL23A1Q86Y22 540 aaPredicted RBP12.82□□□□□ -0.36
LRRTM4-204ENST00000409884 AKAP2Q9Y2D5 859 aa12.82□□□□□ -0.36
LRRTM4-204ENST00000409884 LRP5O75197 1615 aa12.82□□□□□ -0.36
LRRTM4-204ENST00000409884 DYNC1I1O14576 645 aa12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 ADRA2BP18089 450 aa12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 SSFA2P28290 1259 aa12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 IGHMBP2P38935 993 aaKnown RBP12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 EZH2Q15910 746 aaKnown RBP12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 TTC39AQ5SRH9 613 aa12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 CCDC129Q6ZRS4 1044 aa12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 EGFL6Q8IUX8 553 aa12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 AKT1S1Q96B36 256 aa12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 NYXQ9GZU5 481 aa12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 LSG1Q9H089 658 aaKnown RBP12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 PAG1Q9NWQ8 432 aa12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 CARMIL3Q8ND23 1372 aa12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 MCAMP43121 646 aa12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 ZAP70P43403 619 aa12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 PRR5LQ6MZQ0 368 aa12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 CNBD1Q8NA66 436 aa12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 NLRP3Q96P20 1036 aa12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 SLKQ9H2G2 1235 aaPredicted RBP12.81□□□□□ -0.36
LRRTM4-204ENST00000409884 FGFR2P21802 821 aa12.8□□□□□ -0.36
LRRTM4-204ENST00000409884 TM4SF1P30408 202 aa12.8□□□□□ -0.36
LRRTM4-204ENST00000409884 CCDC158Q5M9N0 1113 aa12.8□□□□□ -0.36
LRRTM4-204ENST00000409884 MSL1Q68DK7 614 aa12.8□□□□□ -0.36
LRRTM4-204ENST00000409884 ANKRD18AQ8IVF6 992 aa12.8□□□□□ -0.36
LRRTM4-204ENST00000409884 TNS1Q9HBL0 1735 aaKnown RBP12.8□□□□□ -0.36
LRRTM4-204ENST00000409884 MROH5Q6ZUA9 1318 aa12.8□□□□□ -0.36
LRRTM4-204ENST00000409884 SERPINB2P05120 415 aa12.8□□□□□ -0.36
LRRTM4-204ENST00000409884 PUM3Q15397 648 aaKnown RBP12.8□□□□□ -0.36
LRRTM4-204ENST00000409884 CCDC102BQ68D86 513 aa12.8□□□□□ -0.36
LRRTM4-204ENST00000409884 IQSEC3Q9UPP2 1182 aaPredicted RBP12.8□□□□□ -0.36
LRRTM4-204ENST00000409884 RGL2O15211 777 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms