RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 ZNF280AP59817 542 aaPredicted RBP24.75■■□□□ 1.55
TSPAN4-209ENST00000409543 DEFB115Q30KQ5 88 aa24.75■■□□□ 1.55
TSPAN4-209ENST00000409543 TAF7LQ5H9L4 462 aa24.75■■□□□ 1.55
TSPAN4-209ENST00000409543 RBM26Q5T8P6 1007 aaKnown RBP24.75■■□□□ 1.55
TSPAN4-209ENST00000409543 DIEXFQ68CQ4 756 aaKnown RBP24.75■■□□□ 1.55
TSPAN4-209ENST00000409543 KIF4BQ2VIQ3 1234 aa24.74■■□□□ 1.55
TSPAN4-209ENST00000409543 LDHAL6AQ6ZMR3 332 aa24.74■■□□□ 1.55
TSPAN4-209ENST00000409543 ZNF594Q96JF6 807 aaPredicted RBP24.74■■□□□ 1.55
TSPAN4-209ENST00000409543 KLRK1P26718 216 aa24.73■■□□□ 1.55
TSPAN4-209ENST00000409543 MIER1Q8N108 512 aa24.73■■□□□ 1.55
TSPAN4-209ENST00000409543 TAF5LO75529 589 aa24.72■■□□□ 1.55
TSPAN4-209ENST00000409543 USP17L8P0C7I0 530 aa24.72■■□□□ 1.55
TSPAN4-209ENST00000409543 DACT2Q5SW24 774 aa24.72■■□□□ 1.55
TSPAN4-209ENST00000409543 STRIP1Q5VSL9 837 aa24.72■■□□□ 1.55
TSPAN4-209ENST00000409543 C15orf52Q6ZUT6 534 aaKnown RBP24.72■■□□□ 1.55
TSPAN4-209ENST00000409543 HELBQ8NG08 1087 aaPredicted RBP24.72■■□□□ 1.55
TSPAN4-209ENST00000409543 IRS2Q9Y4H2 1338 aa24.71■■□□□ 1.55
TSPAN4-209ENST00000409543 CELF2O95319 508 aaKnown RBP24.71■■□□□ 1.55
TSPAN4-209ENST00000409543 HSPA1AP0DMV8 641 aaKnown RBP24.71■■□□□ 1.55
TSPAN4-209ENST00000409543 HSPA1BP0DMV9 641 aaKnown RBP24.71■■□□□ 1.55
TSPAN4-209ENST00000409543 BRPF1P55201 1214 aaPredicted RBP24.71■■□□□ 1.55
TSPAN4-209ENST00000409543 RABL6Q3YEC7 729 aaPredicted RBP24.71■■□□□ 1.55
TSPAN4-209ENST00000409543 USP48Q86UV5 1035 aa24.71■■□□□ 1.55
TSPAN4-209ENST00000409543 DCPSQ96C86 337 aaKnown RBP24.71■■□□□ 1.55
TSPAN4-209ENST00000409543 USP44Q9H0E7 712 aa24.71■■□□□ 1.55
TSPAN4-209ENST00000409543 BICC1Q9H694 974 aaKnown RBP24.71■■□□□ 1.55
TSPAN4-209ENST00000409543 CNNM1Q9NRU3 951 aa24.71■■□□□ 1.55
TSPAN4-209ENST00000409543 TLL2Q9Y6L7 1015 aa24.7■■□□□ 1.54
TSPAN4-209ENST00000409543 A0A1B0GUL6 1792 aa24.7■■□□□ 1.54
TSPAN4-209ENST00000409543 MYO3BQ8WXR4 1341 aa24.69■■□□□ 1.54
TSPAN4-209ENST00000409543 SNAP23O00161 211 aa24.69■■□□□ 1.54
TSPAN4-209ENST00000409543 KRT26Q7Z3Y9 468 aa24.69■■□□□ 1.54
TSPAN4-209ENST00000409543 TTLL5Q6EMB2 1281 aa24.68■■□□□ 1.54
TSPAN4-209ENST00000409543 ANKRD44Q8N8A2 993 aa24.68■■□□□ 1.54
TSPAN4-209ENST00000409543 FBXW7Q969H0 707 aa24.68■■□□□ 1.54
TSPAN4-209ENST00000409543 CD209Q9NNX6 404 aa24.68■■□□□ 1.54
TSPAN4-209ENST00000409543 MYOZ2Q9NPC6 264 aa24.68■■□□□ 1.54
TSPAN4-209ENST00000409543 NOB1Q9ULX3 412 aaKnown RBP24.68■■□□□ 1.54
TSPAN4-209ENST00000409543 ZNF646O15015 1829 aaPredicted RBP24.68■■□□□ 1.54
TSPAN4-209ENST00000409543 POLR2AP24928 1970 aaKnown RBP24.67■■□□□ 1.54
TSPAN4-209ENST00000409543 WDR33Q9C0J8 1336 aaKnown RBP24.67■■□□□ 1.54
TSPAN4-209ENST00000409543 SAPCD2Q86UD0 394 aa24.67■■□□□ 1.54
TSPAN4-209ENST00000409543 MXD3Q9BW11 206 aa24.67■■□□□ 1.54
TSPAN4-209ENST00000409543 ZNF408Q9H9D4 720 aa24.67■■□□□ 1.54
TSPAN4-209ENST00000409543 PLIN1O60240 522 aa24.66■■□□□ 1.54
TSPAN4-209ENST00000409543 MMP14P50281 582 aa24.66■■□□□ 1.54
TSPAN4-209ENST00000409543 RARSP54136 660 aaKnown RBP24.66■■□□□ 1.54
TSPAN4-209ENST00000409543 SCARF1Q14162 830 aa24.66■■□□□ 1.54
TSPAN4-209ENST00000409543 OGFOD1Q8N543 542 aa24.66■■□□□ 1.54
TSPAN4-209ENST00000409543 PUS3Q9BZE2 481 aaKnown RBP24.66■■□□□ 1.54
TSPAN4-209ENST00000409543 API5Q9BZZ5 524 aaKnown RBP24.66■■□□□ 1.54
TSPAN4-209ENST00000409543 GGA3Q9NZ52 723 aa24.66■■□□□ 1.54
TSPAN4-209ENST00000409543 ECE1P42892 770 aa24.65■■□□□ 1.54
TSPAN4-209ENST00000409543 GTF2IP78347 998 aa24.65■■□□□ 1.54
TSPAN4-209ENST00000409543 ZNF804AQ7Z570 1209 aa24.65■■□□□ 1.54
TSPAN4-209ENST00000409543 SULF1Q8IWU6 871 aa24.65■■□□□ 1.54
TSPAN4-209ENST00000409543 HHIPL1Q96JK4 782 aa24.65■■□□□ 1.54
TSPAN4-209ENST00000409543 RIPOR2Q9Y4F9 1068 aa24.65■■□□□ 1.54
TSPAN4-209ENST00000409543 ASTN2O75129 1339 aaPredicted RBP24.64■■□□□ 1.54
TSPAN4-209ENST00000409543 IL1R1P14778 569 aa24.64■■□□□ 1.54
TSPAN4-209ENST00000409543 DLK2Q6UY11 383 aa24.64■■□□□ 1.54
TSPAN4-209ENST00000409543 CAPNS2Q96L46 248 aa24.64■■□□□ 1.54
TSPAN4-209ENST00000409543 MROH5Q6ZUA9 1318 aa24.63■■□□□ 1.53
TSPAN4-209ENST00000409543 ADM5C9JUS6 153 aa24.63■■□□□ 1.53
TSPAN4-209ENST00000409543 UBE4AQ14139 1066 aa24.63■■□□□ 1.53
TSPAN4-209ENST00000409543 ANGEL2Q5VTE6 544 aaKnown RBP24.63■■□□□ 1.53
TSPAN4-209ENST00000409543 PAXIP1Q6ZW49 1069 aaPredicted RBP24.63■■□□□ 1.53
TSPAN4-209ENST00000409543 PITPNM2Q9BZ72 1349 aa24.62■■□□□ 1.53
TSPAN4-209ENST00000409543 CYP4F22Q6NT55 531 aa24.62■■□□□ 1.53
TSPAN4-209ENST00000409543 ARHGAP45Q92619 1136 aa24.61■■□□□ 1.53
TSPAN4-209ENST00000409543 WBP1LQ9NX94 342 aa24.61■■□□□ 1.53
TSPAN4-209ENST00000409543 KIF16BQ96L93 1317 aa24.61■■□□□ 1.53
TSPAN4-209ENST00000409543 KIAA0825Q8IV33 1275 aa24.6■■□□□ 1.53
TSPAN4-209ENST00000409543 HDAC9Q9UKV0 1011 aa24.6■■□□□ 1.53
TSPAN4-209ENST00000409543 FKBP1AP62942 108 aaKnown RBP24.59■■□□□ 1.53
TSPAN4-209ENST00000409543 HNRNPUQ00839 825 aaKnown RBP eCLIP24.59■■□□□ 1.53
TSPAN4-209ENST00000409543 MAP2K1Q02750 393 aaPredicted RBP24.59■■□□□ 1.53
TSPAN4-209ENST00000409543 NBPF9Q3BBW0 867 aa24.59■■□□□ 1.53
TSPAN4-209ENST00000409543 LRRC24Q50LG9 513 aa24.59■■□□□ 1.53
TSPAN4-209ENST00000409543 COL13A1Q5TAT6 717 aaPredicted RBP24.59■■□□□ 1.53
TSPAN4-209ENST00000409543 IFFO2Q5TF58 517 aa24.59■■□□□ 1.53
TSPAN4-209ENST00000409543 AIDAQ96BJ3 306 aa24.59■■□□□ 1.53
TSPAN4-209ENST00000409543 UBTFL1P0CB47 393 aaPredicted RBP24.58■■□□□ 1.53
TSPAN4-209ENST00000409543 GRM1Q13255 1194 aa24.58■■□□□ 1.53
TSPAN4-209ENST00000409543 CERS5Q8N5B7 392 aa24.58■■□□□ 1.53
TSPAN4-209ENST00000409543 C2orf69Q8N8R5 385 aa24.58■■□□□ 1.53
TSPAN4-209ENST00000409543 CDCA5Q96FF9 252 aa24.58■■□□□ 1.53
TSPAN4-209ENST00000409543 GBA2Q9HCG7 927 aaPredicted RBP24.58■■□□□ 1.53
TSPAN4-209ENST00000409543 THSD7BQ9C0I4 1608 aa24.57■■□□□ 1.52
TSPAN4-209ENST00000409543 WNT10BO00744 389 aa24.57■■□□□ 1.52
TSPAN4-209ENST00000409543 FOXN1O15353 648 aa24.57■■□□□ 1.52
TSPAN4-209ENST00000409543 SASH1O94885 1247 aa24.57■■□□□ 1.52
TSPAN4-209ENST00000409543 MAP2K2P36507 400 aa24.57■■□□□ 1.52
TSPAN4-209ENST00000409543 METTL24Q5JXM2 366 aa24.57■■□□□ 1.52
TSPAN4-209ENST00000409543 KLHDC4Q8TBB5 520 aa24.57■■□□□ 1.52
TSPAN4-209ENST00000409543 HDAC5Q9UQL6 1122 aa24.57■■□□□ 1.52
TSPAN4-209ENST00000409543 PDE8BO95263 885 aa24.56■■□□□ 1.52
TSPAN4-209ENST00000409543 HIBADHP31937 336 aaKnown RBP24.56■■□□□ 1.52
TSPAN4-209ENST00000409543 RFX5P48382 616 aaPredicted RBP24.56■■□□□ 1.52
TSPAN4-209ENST00000409543 HUNKP57058 714 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms