RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 AACSQ86V21 672 aa25.16■■□□□ 1.62
VSX1-203ENST00000409285 PSMD1Q99460 953 aa25.16■■□□□ 1.62
VSX1-203ENST00000409285 BCS1LQ9Y276 419 aa25.16■■□□□ 1.62
VSX1-203ENST00000409285 AK9Q5TCS8 1911 aa25.16■■□□□ 1.62
VSX1-203ENST00000409285 IFIT1P09914 478 aaKnown RBP25.15■■□□□ 1.62
VSX1-203ENST00000409285 POLLQ9UGP5 575 aa25.15■■□□□ 1.62
VSX1-203ENST00000409285 WWC3Q9ULE0 1092 aa25.15■■□□□ 1.62
VSX1-203ENST00000409285 ZNF646O15015 1829 aaPredicted RBP25.15■■□□□ 1.62
VSX1-203ENST00000409285 UFL1O94874 794 aa25.15■■□□□ 1.62
VSX1-203ENST00000409285 KCNJ4P48050 445 aa25.15■■□□□ 1.62
VSX1-203ENST00000409285 DBNLQ9UJU6 430 aaKnown RBP25.15■■□□□ 1.62
VSX1-203ENST00000409285 IFIT2P09913 472 aaKnown RBP25.14■■□□□ 1.61
VSX1-203ENST00000409285 TIMM10P62072 90 aa25.14■■□□□ 1.61
VSX1-203ENST00000409285 LTBP3Q9NS15 1303 aa25.14■■□□□ 1.61
VSX1-203ENST00000409285 SNAP23O00161 211 aa25.13■■□□□ 1.61
VSX1-203ENST00000409285 ZBTB22O15209 634 aa25.13■■□□□ 1.61
VSX1-203ENST00000409285 SUPT20HQ8NEM7 779 aa25.13■■□□□ 1.61
VSX1-203ENST00000409285 YBX3P16989 372 aaKnown RBP eCLIP25.12■■□□□ 1.61
VSX1-203ENST00000409285 XAGE2Q96GT9 111 aa25.12■■□□□ 1.61
VSX1-203ENST00000409285 ZNF219Q9P2Y4 722 aaPredicted RBP25.12■■□□□ 1.61
VSX1-203ENST00000409285 WTIPA6NIX2 430 aaPredicted RBP25.11■■□□□ 1.61
VSX1-203ENST00000409285 PDE4AP27815 886 aa25.11■■□□□ 1.61
VSX1-203ENST00000409285 FKBP4Q02790 459 aaKnown RBP eCLIP25.11■■□□□ 1.61
VSX1-203ENST00000409285 NEUROD6Q96NK8 337 aa25.11■■□□□ 1.61
VSX1-203ENST00000409285 EYA3Q99504 573 aa25.11■■□□□ 1.61
VSX1-203ENST00000409285 CCDC8Q9H0W5 538 aaPredicted RBP25.11■■□□□ 1.61
VSX1-203ENST00000409285 VPS33BQ9H267 617 aa25.11■■□□□ 1.61
VSX1-203ENST00000409285 TLR7Q9NYK1 1049 aaKnown RBP25.11■■□□□ 1.61
VSX1-203ENST00000409285 TTC41PQ6P2S7 1318 aa25.1■■□□□ 1.61
VSX1-203ENST00000409285 GRIN3BO60391 1043 aa25.1■■□□□ 1.61
VSX1-203ENST00000409285 DBNDD2Q9BQY9 259 aa25.1■■□□□ 1.61
VSX1-203ENST00000409285 STAP2Q9UGK3 403 aa25.1■■□□□ 1.61
VSX1-203ENST00000409285 MYH7P12883 1935 aa25.1■■□□□ 1.61
VSX1-203ENST00000409285 DOCK2Q92608 1830 aa25.1■■□□□ 1.61
VSX1-203ENST00000409285 AOX1Q06278 1338 aa25.1■■□□□ 1.61
VSX1-203ENST00000409285 SCN9AQ15858 1988 aa25.09■■□□□ 1.61
VSX1-203ENST00000409285 C6orf229H3BNL8 230 aa25.09■■□□□ 1.61
VSX1-203ENST00000409285 MX1P20591 662 aa25.09■■□□□ 1.61
VSX1-203ENST00000409285 ADORA1P30542 326 aa25.09■■□□□ 1.61
VSX1-203ENST00000409285 C16orf71Q8IYS4 520 aaPredicted RBP25.09■■□□□ 1.61
VSX1-203ENST00000409285 ZNF512BQ96KM6 892 aaPredicted RBP25.09■■□□□ 1.61
VSX1-203ENST00000409285 OSBPL3Q9H4L5 887 aa25.09■■□□□ 1.61
VSX1-203ENST00000409285 KLRK1P26718 216 aa25.09■■□□□ 1.61
VSX1-203ENST00000409285 OTUD7AQ8TE49 926 aaPredicted RBP25.09■■□□□ 1.61
VSX1-203ENST00000409285 GPATCH3Q96I76 525 aa25.09■■□□□ 1.61
VSX1-203ENST00000409285 TAOK3Q9H2K8 898 aa25.09■■□□□ 1.61
VSX1-203ENST00000409285 NFKBIEO00221 500 aa25.08■■□□□ 1.6
VSX1-203ENST00000409285 CAVIN4Q5BKX8 364 aa25.08■■□□□ 1.6
VSX1-203ENST00000409285 FBXO33Q7Z6M2 555 aa25.08■■□□□ 1.6
VSX1-203ENST00000409285 PLEKHM2Q8IWE5 1019 aa25.08■■□□□ 1.6
VSX1-203ENST00000409285 FAM84BQ96KN1 310 aaPredicted RBP25.08■■□□□ 1.6
VSX1-203ENST00000409285 MYO5AQ9Y4I1 1855 aaKnown RBP25.08■■□□□ 1.6
VSX1-203ENST00000409285 TIAM2Q8IVF5 1701 aa25.07■■□□□ 1.6
VSX1-203ENST00000409285 KIAA2012Q0VF49 1180 aa25.07■■□□□ 1.6
VSX1-203ENST00000409285 WASHC4Q2M389 1173 aa25.07■■□□□ 1.6
VSX1-203ENST00000409285 TXNRD3Q86VQ6 643 aa25.07■■□□□ 1.6
VSX1-203ENST00000409285 ECHDC1Q9NTX5 307 aa25.07■■□□□ 1.6
VSX1-203ENST00000409285 ARID4AP29374 1257 aaPredicted RBP25.06■■□□□ 1.6
VSX1-203ENST00000409285 PDE1AP54750 535 aa25.06■■□□□ 1.6
VSX1-203ENST00000409285 CCDC158Q5M9N0 1113 aa25.06■■□□□ 1.6
VSX1-203ENST00000409285 CCDC102BQ68D86 513 aa25.06■■□□□ 1.6
VSX1-203ENST00000409285 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.06■■□□□ 1.6
VSX1-203ENST00000409285 ZC3H12CQ9C0D7 883 aaKnown RBP25.06■■□□□ 1.6
VSX1-203ENST00000409285 GORABQ5T7V8 394 aa25.05■■□□□ 1.6
VSX1-203ENST00000409285 ZNF804AQ7Z570 1209 aa25.05■■□□□ 1.6
VSX1-203ENST00000409285 COL4A5P29400 1685 aa25.04■■□□□ 1.6
VSX1-203ENST00000409285 ATP5JP18859 108 aa25.04■■□□□ 1.6
VSX1-203ENST00000409285 HIBADHP31937 336 aaKnown RBP25.04■■□□□ 1.6
VSX1-203ENST00000409285 GYG1P46976 350 aa25.04■■□□□ 1.6
VSX1-203ENST00000409285 GPR101Q96P66 508 aaPredicted RBP25.04■■□□□ 1.6
VSX1-203ENST00000409285 PDS5AQ29RF7 1337 aaKnown RBP25.04■■□□□ 1.6
VSX1-203ENST00000409285 SEMA3EO15041 775 aa25.03■■□□□ 1.6
VSX1-203ENST00000409285 PHKA1P46020 1223 aa25.03■■□□□ 1.6
VSX1-203ENST00000409285 PI4K2BQ8TCG2 481 aa25.03■■□□□ 1.6
VSX1-203ENST00000409285 COA1Q9GZY4 146 aa25.03■■□□□ 1.6
VSX1-203ENST00000409285 ERC2O15083 957 aa25.02■■□□□ 1.6
VSX1-203ENST00000409285 UQCRFS1P1P0C7P4 283 aa25.02■■□□□ 1.6
VSX1-203ENST00000409285 IL1R1P14778 569 aa25.02■■□□□ 1.6
VSX1-203ENST00000409285 BCAMP50895 628 aa25.02■■□□□ 1.6
VSX1-203ENST00000409285 VPS37DQ86XT2 251 aa25.02■■□□□ 1.6
VSX1-203ENST00000409285 BCL11AQ9H165 835 aa25.02■■□□□ 1.6
VSX1-203ENST00000409285 GNL3LQ9NVN8 582 aaKnown RBP25.02■■□□□ 1.6
VSX1-203ENST00000409285 MAST2Q6P0Q8 1798 aa25.02■■□□□ 1.6
VSX1-203ENST00000409285 GLRX3O76003 335 aaKnown RBP25.02■■□□□ 1.6
VSX1-203ENST00000409285 TTC39AQ5SRH9 613 aa25.02■■□□□ 1.6
VSX1-203ENST00000409285 COL1A1P02452 1464 aaPredicted RBP25.01■■□□□ 1.59
VSX1-203ENST00000409285 IARSP41252 1262 aaKnown RBP25.01■■□□□ 1.59
VSX1-203ENST00000409285 PPIP5K2O43314 1243 aa25■■□□□ 1.59
VSX1-203ENST00000409285 AOC3Q16853 763 aa25■■□□□ 1.59
VSX1-203ENST00000409285 TDRD7Q8NHU6 1098 aaKnown RBP25■■□□□ 1.59
VSX1-203ENST00000409285 CD209Q9NNX6 404 aa25■■□□□ 1.59
VSX1-203ENST00000409285 ZNF277Q9NRM2 450 aaPredicted RBP25■■□□□ 1.59
VSX1-203ENST00000409285 RIMBP2O15034 1052 aa24.99■■□□□ 1.59
VSX1-203ENST00000409285 PODNQ7Z5L7 613 aa24.99■■□□□ 1.59
VSX1-203ENST00000409285 SKAP1Q86WV1 359 aa24.99■■□□□ 1.59
VSX1-203ENST00000409285 MCAMP43121 646 aa24.98■■□□□ 1.59
VSX1-203ENST00000409285 RASGRF1Q13972 1273 aa24.98■■□□□ 1.59
VSX1-203ENST00000409285 TSHZ3Q63HK5 1081 aa24.98■■□□□ 1.59
VSX1-203ENST00000409285 RASSF7Q02833 373 aa24.97■■□□□ 1.59
VSX1-203ENST00000409285 ARHGAP27Q6ZUM4 889 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms