RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 GCKRQ14397 625 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 AKAP4Q5JQC9 854 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 ZNF790Q6PG37 636 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 KRT28Q7Z3Y7 464 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 CCDC24Q8N4L8 307 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 UIMC1Q96RL1 719 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 ABCF2Q9UG63 623 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 BAZ2BQ9UIF8 2168 aaKnown RBP9.69□□□□□ -0.86
SNX13-201ENST00000409076 TTC41PQ6P2S7 1318 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 NEURL1BA8MQ27 555 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 CASP1P29466 404 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 DNA2P51530 1060 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 EVA1CP58658 441 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 PNOCQ13519 176 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 DHX8Q14562 1220 aaKnown RBP9.69□□□□□ -0.86
SNX13-201ENST00000409076 METTL24Q5JXM2 366 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 MIGA1Q8NAN2 632 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 ZNF396Q96N95 335 aaPredicted RBP9.69□□□□□ -0.86
SNX13-201ENST00000409076 MAPK8IP1Q9UQF2 711 aa9.69□□□□□ -0.86
SNX13-201ENST00000409076 HIP1O00291 1037 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 PRC1O43663 620 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 FAM193AP78312 1265 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 TRIM29Q14134 588 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 MTERF4Q7Z6M4 381 aaKnown RBP9.68□□□□□ -0.86
SNX13-201ENST00000409076 THEMISQ8N1K5 641 aaPredicted RBP9.68□□□□□ -0.86
SNX13-201ENST00000409076 GDAP1L1Q96MZ0 367 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 SLC26A6Q9BXS9 759 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 LZTFL1Q9NQ48 299 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 MLH3Q9UHC1 1453 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 AATKQ6ZMQ8 1374 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 A0A1B0GUL7 405 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 B4E1Z4 1266 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 ARHGAP29Q52LW3 1261 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 BICDL1Q6ZP65 573 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 KIF18AQ8NI77 898 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 KAZALD1Q96I82 304 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 PLIN2Q99541 437 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 PUF60Q9UHX1 559 aaKnown RBP9.68□□□□□ -0.86
SNX13-201ENST00000409076 KCNJ14Q9UNX9 436 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 DLG5Q8TDM6 1919 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 CPSF1Q10570 1443 aaKnown RBP9.68□□□□□ -0.86
SNX13-201ENST00000409076 IP6K1Q92551 441 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 ANO10Q9NW15 660 aa9.68□□□□□ -0.86
SNX13-201ENST00000409076 E7EWF7 191 aa9.67□□□□□ -0.86
SNX13-201ENST00000409076 ADKP55263 362 aaKnown RBP9.67□□□□□ -0.86
SNX13-201ENST00000409076 SRRTQ9BXP5 876 aaKnown RBP9.67□□□□□ -0.86
SNX13-201ENST00000409076 PCDHA7Q9UN72 937 aa9.67□□□□□ -0.86
SNX13-201ENST00000409076 IBSPP21815 317 aaPredicted RBP9.67□□□□□ -0.86
SNX13-201ENST00000409076 NCBP3Q53F19 620 aaKnown RBP9.67□□□□□ -0.86
SNX13-201ENST00000409076 CCDC158Q5M9N0 1113 aa9.67□□□□□ -0.86
SNX13-201ENST00000409076 MRPS27Q92552 414 aaKnown RBP9.67□□□□□ -0.86
SNX13-201ENST00000409076 KIAA1210Q9ULL0 1709 aa9.67□□□□□ -0.86
SNX13-201ENST00000409076 RAD21O60216 631 aa9.67□□□□□ -0.86
SNX13-201ENST00000409076 PRDM1O75626 825 aa9.67□□□□□ -0.86
SNX13-201ENST00000409076 ZAP70P43403 619 aa9.67□□□□□ -0.86
SNX13-201ENST00000409076 CARD6Q9BX69 1037 aa9.67□□□□□ -0.86
SNX13-201ENST00000409076 PLEKHA4Q9H4M7 779 aa9.67□□□□□ -0.86
SNX13-201ENST00000409076 DDX21Q9NR30 783 aaKnown RBP eCLIP9.67□□□□□ -0.86
SNX13-201ENST00000409076 U3KPZ7 1027 aaPredicted RBP9.67□□□□□ -0.86
SNX13-201ENST00000409076 ANKRD65E5RJM6 399 aa9.66□□□□□ -0.86
SNX13-201ENST00000409076 M0R2C6 588 aa9.66□□□□□ -0.86
SNX13-201ENST00000409076 FOXN1O15353 648 aa9.66□□□□□ -0.86
SNX13-201ENST00000409076 GNG11P61952 73 aa9.66□□□□□ -0.86
SNX13-201ENST00000409076 CTDSPL2Q05D32 466 aa9.66□□□□□ -0.86
SNX13-201ENST00000409076 LRRC8AQ8IWT6 810 aa9.66□□□□□ -0.86
SNX13-201ENST00000409076 UBXN4Q92575 508 aa9.66□□□□□ -0.86
SNX13-201ENST00000409076 NAT10Q9H0A0 1025 aaKnown RBP9.66□□□□□ -0.86
SNX13-201ENST00000409076 ZCCHC17Q9NP64 241 aaKnown RBP9.66□□□□□ -0.86
SNX13-201ENST00000409076 TBC1D2BQ9UPU7 963 aa9.66□□□□□ -0.86
SNX13-201ENST00000409076 TMEM2Q9UHN6 1383 aa9.66□□□□□ -0.86
SNX13-201ENST00000409076 ABCA9Q8IUA7 1624 aa9.66□□□□□ -0.86
SNX13-201ENST00000409076 UBASH3AP57075 661 aa9.66□□□□□ -0.86
SNX13-201ENST00000409076 DHX32Q7L7V1 743 aaKnown RBP9.66□□□□□ -0.86
SNX13-201ENST00000409076 NEK11Q8NG66 645 aa9.66□□□□□ -0.86
SNX13-201ENST00000409076 ALG1Q9BT22 464 aa9.66□□□□□ -0.86
SNX13-201ENST00000409076 HDAC5Q9UQL6 1122 aa9.66□□□□□ -0.86
SNX13-201ENST00000409076 ARHGEF10O15013 1369 aa9.66□□□□□ -0.86
SNX13-201ENST00000409076 ZNF213O14771 459 aa9.66□□□□□ -0.86
SNX13-201ENST00000409076 IMMTQ16891 758 aaKnown RBP9.66□□□□□ -0.86
SNX13-201ENST00000409076 TTC21AQ8NDW8 1320 aa9.65□□□□□ -0.86
SNX13-201ENST00000409076 TMEM232C9JQI7 657 aa9.65□□□□□ -0.86
SNX13-201ENST00000409076 SPTLC2O15270 562 aa9.65□□□□□ -0.86
SNX13-201ENST00000409076 KRT32Q14532 448 aa9.65□□□□□ -0.86
SNX13-201ENST00000409076 MCM6Q14566 821 aa9.65□□□□□ -0.86
SNX13-201ENST00000409076 SLC9C2Q5TAH2 1124 aa9.65□□□□□ -0.86
SNX13-201ENST00000409076 OLFM4Q6UX06 510 aa9.65□□□□□ -0.86
SNX13-201ENST00000409076 CNNM3Q8NE01 707 aa9.65□□□□□ -0.86
SNX13-201ENST00000409076 NSUN7Q8NE18 718 aaKnown RBP9.65□□□□□ -0.86
SNX13-201ENST00000409076 PRDM11Q9NQV5 511 aa9.65□□□□□ -0.86
SNX13-201ENST00000409076 HSPD1P10809 573 aaKnown RBP9.65□□□□□ -0.86
SNX13-201ENST00000409076 TNNT3P45378 269 aaPredicted RBP9.65□□□□□ -0.86
SNX13-201ENST00000409076 RESTQ13127 1097 aa9.65□□□□□ -0.86
SNX13-201ENST00000409076 FBXO38Q6PIJ6 1188 aa9.65□□□□□ -0.86
SNX13-201ENST00000409076 SMAP1Q8IYB5 467 aaPredicted RBP9.65□□□□□ -0.86
SNX13-201ENST00000409076 SMYD4Q8IYR2 804 aaPredicted RBP9.65□□□□□ -0.86
SNX13-201ENST00000409076 SENP2Q9HC62 589 aa9.65□□□□□ -0.86
SNX13-201ENST00000409076 SMTNL1A8MU46 457 aa9.65□□□□□ -0.87
SNX13-201ENST00000409076 TOP1P11387 765 aaKnown RBP9.65□□□□□ -0.87
SNX13-201ENST00000409076 ZSCAN20P17040 1043 aaPredicted RBP9.65□□□□□ -0.87
SNX13-201ENST00000409076 SYKP43405 635 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms