RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 WNT10BO00744 389 aa16.95■□□□□ 0.3
TUBA3D-202ENST00000409047 TBC1D8O95759 1140 aa16.95■□□□□ 0.3
TUBA3D-202ENST00000409047 HSP90B1P14625 803 aaKnown RBP16.95■□□□□ 0.3
TUBA3D-202ENST00000409047 TM4SF4P48230 202 aa16.95■□□□□ 0.3
TUBA3D-202ENST00000409047 CTSWP56202 376 aa16.95■□□□□ 0.3
TUBA3D-202ENST00000409047 TXNRD3Q86VQ6 643 aa16.95■□□□□ 0.3
TUBA3D-202ENST00000409047 TTLL11Q8NHH1 800 aa16.95■□□□□ 0.3
TUBA3D-202ENST00000409047 MINPP1Q9UNW1 487 aa16.95■□□□□ 0.3
TUBA3D-202ENST00000409047 WDR43Q15061 677 aaKnown RBP eCLIP16.94■□□□□ 0.3
TUBA3D-202ENST00000409047 R3HDMLQ9H3Y0 253 aa16.94■□□□□ 0.3
TUBA3D-202ENST00000409047 GREM2Q9H772 168 aa16.94■□□□□ 0.3
TUBA3D-202ENST00000409047 BSDC1Q9NW68 430 aaPredicted RBP16.94■□□□□ 0.3
TUBA3D-202ENST00000409047 LAMB1P07942 1786 aa16.93■□□□□ 0.3
TUBA3D-202ENST00000409047 DDX10Q13206 875 aaKnown RBP16.93■□□□□ 0.3
TUBA3D-202ENST00000409047 NOM1Q5C9Z4 860 aaKnown RBP16.93■□□□□ 0.3
TUBA3D-202ENST00000409047 PRPF38BQ5VTL8 546 aaKnown RBP16.93■□□□□ 0.3
TUBA3D-202ENST00000409047 TSPYL6Q8N831 410 aa16.93■□□□□ 0.3
TUBA3D-202ENST00000409047 ZBED3Q96IU2 234 aaPredicted RBP16.93■□□□□ 0.3
TUBA3D-202ENST00000409047 MAP3K2Q9Y2U5 619 aa16.93■□□□□ 0.3
TUBA3D-202ENST00000409047 GPR25O00155 361 aa16.92■□□□□ 0.3
TUBA3D-202ENST00000409047 APAF1O14727 1248 aa16.92■□□□□ 0.3
TUBA3D-202ENST00000409047 KLRK1P26718 216 aa16.92■□□□□ 0.3
TUBA3D-202ENST00000409047 CCT4P50991 539 aaKnown RBP16.92■□□□□ 0.3
TUBA3D-202ENST00000409047 PKN2Q16513 984 aaKnown RBP16.92■□□□□ 0.3
TUBA3D-202ENST00000409047 CFHR5Q9BXR6 569 aa16.92■□□□□ 0.3
TUBA3D-202ENST00000409047 GNAI1P63096 354 aa16.91■□□□□ 0.3
TUBA3D-202ENST00000409047 PTPN12Q05209 780 aaKnown RBP16.91■□□□□ 0.3
TUBA3D-202ENST00000409047 STRIP1Q5VSL9 837 aa16.91■□□□□ 0.3
TUBA3D-202ENST00000409047 CDC5LQ99459 802 aaKnown RBP16.91■□□□□ 0.3
TUBA3D-202ENST00000409047 PI4KAP2A4QPH2 592 aa16.9■□□□□ 0.3
TUBA3D-202ENST00000409047 SASH1O94885 1247 aa16.9■□□□□ 0.3
TUBA3D-202ENST00000409047 MKRN3Q13064 507 aaKnown RBP16.9■□□□□ 0.3
TUBA3D-202ENST00000409047 LDLRAD1Q5T700 205 aa16.9■□□□□ 0.3
TUBA3D-202ENST00000409047 PI4KAP1Q8N8J0 262 aa16.9■□□□□ 0.3
TUBA3D-202ENST00000409047 A0A1B0GUL6 1792 aa16.89■□□□□ 0.3
TUBA3D-202ENST00000409047 CWF19L2Q2TBE0 894 aaKnown RBP16.89■□□□□ 0.29
TUBA3D-202ENST00000409047 KSR2Q6VAB6 950 aa16.89■□□□□ 0.29
TUBA3D-202ENST00000409047 COA1Q9GZY4 146 aa16.89■□□□□ 0.29
TUBA3D-202ENST00000409047 FZD1Q9UP38 647 aa16.89■□□□□ 0.29
TUBA3D-202ENST00000409047 MYO3BQ8WXR4 1341 aa16.89■□□□□ 0.29
TUBA3D-202ENST00000409047 IRS2Q9Y4H2 1338 aa16.89■□□□□ 0.29
TUBA3D-202ENST00000409047 SSC5DA1L4H1 1573 aa16.89■□□□□ 0.29
TUBA3D-202ENST00000409047 NEURL1BA8MQ27 555 aa16.88■□□□□ 0.29
TUBA3D-202ENST00000409047 H7C1W4 665 aa16.88■□□□□ 0.29
TUBA3D-202ENST00000409047 DDX58O95786 925 aaKnown RBP16.88■□□□□ 0.29
TUBA3D-202ENST00000409047 CASP7P55210 303 aa16.88■□□□□ 0.29
TUBA3D-202ENST00000409047 CCDC30Q5VVM6 783 aa16.88■□□□□ 0.29
TUBA3D-202ENST00000409047 FBXO46Q6PJ61 603 aaPredicted RBP16.88■□□□□ 0.29
TUBA3D-202ENST00000409047 HDAC9Q9UKV0 1011 aa16.88■□□□□ 0.29
TUBA3D-202ENST00000409047 ECM29Q5VYK3 1845 aa16.88■□□□□ 0.29
TUBA3D-202ENST00000409047 TTLL12Q14166 644 aaPredicted RBP16.87■□□□□ 0.29
TUBA3D-202ENST00000409047 SPRYD7Q5W111 196 aa16.87■□□□□ 0.29
TUBA3D-202ENST00000409047 G2E3Q7L622 706 aa16.87■□□□□ 0.29
TUBA3D-202ENST00000409047 OGFOD1Q8N543 542 aa16.87■□□□□ 0.29
TUBA3D-202ENST00000409047 LEMD3Q9Y2U8 911 aa16.87■□□□□ 0.29
TUBA3D-202ENST00000409047 TTLL5Q6EMB2 1281 aa16.86■□□□□ 0.29
TUBA3D-202ENST00000409047 KIAA0825Q8IV33 1275 aa16.86■□□□□ 0.29
TUBA3D-202ENST00000409047 PLA2G12BQ9BX93 195 aa16.86■□□□□ 0.29
TUBA3D-202ENST00000409047 PRKRIP1Q9H875 184 aaPredicted RBP16.86■□□□□ 0.29
TUBA3D-202ENST00000409047 MMP14P50281 582 aa16.85■□□□□ 0.29
TUBA3D-202ENST00000409047 SREBF2Q12772 1141 aa16.85■□□□□ 0.29
TUBA3D-202ENST00000409047 PRKG1Q13976 671 aa16.85■□□□□ 0.29
TUBA3D-202ENST00000409047 UBE3BQ7Z3V4 1068 aa16.85■□□□□ 0.29
TUBA3D-202ENST00000409047 CERS5Q8N5B7 392 aa16.85■□□□□ 0.29
TUBA3D-202ENST00000409047 FBXW7Q969H0 707 aa16.85■□□□□ 0.29
TUBA3D-202ENST00000409047 PCDHAC2Q9Y5I4 1007 aa16.85■□□□□ 0.29
TUBA3D-202ENST00000409047 ZNF804BA4D1E1 1349 aa16.85■□□□□ 0.29
TUBA3D-202ENST00000409047 SNAP23O00161 211 aa16.84■□□□□ 0.29
TUBA3D-202ENST00000409047 FKTNO75072 461 aa16.84■□□□□ 0.29
TUBA3D-202ENST00000409047 CSF1RP07333 972 aa16.84■□□□□ 0.29
TUBA3D-202ENST00000409047 NF2P35240 595 aa16.84■□□□□ 0.29
TUBA3D-202ENST00000409047 GTF2IP78347 998 aa16.84■□□□□ 0.29
TUBA3D-202ENST00000409047 CALD1Q05682 793 aaKnown RBP16.84■□□□□ 0.29
TUBA3D-202ENST00000409047 MAP3K11Q16584 847 aa16.84■□□□□ 0.29
TUBA3D-202ENST00000409047 ARMC9Q7Z3E5 817 aa16.84■□□□□ 0.29
TUBA3D-202ENST00000409047 APOBEC3FQ8IUX4 373 aaKnown RBP16.84■□□□□ 0.29
TUBA3D-202ENST00000409047 TSR2Q969E8 191 aaKnown RBP16.84■□□□□ 0.29
TUBA3D-202ENST00000409047 AOX1Q06278 1338 aa16.84■□□□□ 0.29
TUBA3D-202ENST00000409047 COL1A1P02452 1464 aaPredicted RBP16.84■□□□□ 0.29
TUBA3D-202ENST00000409047 KIAA0100Q14667 2235 aaKnown RBP16.84■□□□□ 0.29
TUBA3D-202ENST00000409047 ITGA6P23229 1130 aa16.83■□□□□ 0.28
TUBA3D-202ENST00000409047 RBBP6Q7Z6E9 1792 aaKnown RBP16.83■□□□□ 0.28
TUBA3D-202ENST00000409047 CD209Q9NNX6 404 aa16.83■□□□□ 0.28
TUBA3D-202ENST00000409047 ANGEL1Q9UNK9 670 aaKnown RBP16.83■□□□□ 0.28
TUBA3D-202ENST00000409047 IGF2BP3O00425 579 aaKnown RBP eCLIP16.82■□□□□ 0.28
TUBA3D-202ENST00000409047 IGHMBP2P38935 993 aaKnown RBP16.82■□□□□ 0.28
TUBA3D-202ENST00000409047 CAP1Q01518 475 aa16.82■□□□□ 0.28
TUBA3D-202ENST00000409047 CHRNDQ07001 517 aa16.82■□□□□ 0.28
TUBA3D-202ENST00000409047 GCKRQ14397 625 aa16.82■□□□□ 0.28
TUBA3D-202ENST00000409047 IFNL1Q8IU54 200 aa16.82■□□□□ 0.28
TUBA3D-202ENST00000409047 MTMR14Q8NCE2 650 aa16.82■□□□□ 0.28
TUBA3D-202ENST00000409047 CLMNQ96JQ2 1002 aa16.82■□□□□ 0.28
TUBA3D-202ENST00000409047 DEFB129Q9H1M3 183 aa16.82■□□□□ 0.28
TUBA3D-202ENST00000409047 OTOFQ9HC10 1997 aa16.82■□□□□ 0.28
TUBA3D-202ENST00000409047 GJA5P36382 358 aa16.81■□□□□ 0.28
TUBA3D-202ENST00000409047 CACNA1FO60840 1977 aa16.8■□□□□ 0.28
TUBA3D-202ENST00000409047 POTEFA5A3E0 1075 aa16.8■□□□□ 0.28
TUBA3D-202ENST00000409047 NEXNQ0ZGT2 675 aa16.8■□□□□ 0.28
TUBA3D-202ENST00000409047 C15orf52Q6ZUT6 534 aaKnown RBP16.8■□□□□ 0.28
TUBA3D-202ENST00000409047 OTOP1Q7RTM1 612 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms