RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 TRAF5O00463 557 aa23.28■■□□□ 1.32
PTPN18-203ENST00000409022 GLIS2Q9BZE0 524 aaPredicted RBP23.28■■□□□ 1.32
PTPN18-203ENST00000409022 HDAC5Q9UQL6 1122 aa23.28■■□□□ 1.32
PTPN18-203ENST00000409022 BRPF1P55201 1214 aaPredicted RBP23.27■■□□□ 1.32
PTPN18-203ENST00000409022 ZNF280AP59817 542 aaPredicted RBP23.27■■□□□ 1.32
PTPN18-203ENST00000409022 ZNF804AQ7Z570 1209 aa23.27■■□□□ 1.32
PTPN18-203ENST00000409022 MIER1Q8N108 512 aa23.27■■□□□ 1.32
PTPN18-203ENST00000409022 CELF2O95319 508 aaKnown RBP23.26■■□□□ 1.31
PTPN18-203ENST00000409022 ECE1P42892 770 aa23.26■■□□□ 1.31
PTPN18-203ENST00000409022 C15orf52Q6ZUT6 534 aaKnown RBP23.26■■□□□ 1.31
PTPN18-203ENST00000409022 BICC1Q9H694 974 aaKnown RBP23.26■■□□□ 1.31
PTPN18-203ENST00000409022 KIF16BQ96L93 1317 aa23.26■■□□□ 1.31
PTPN18-203ENST00000409022 WTIPA6NIX2 430 aaPredicted RBP23.25■■□□□ 1.31
PTPN18-203ENST00000409022 TAF5LO75529 589 aa23.25■■□□□ 1.31
PTPN18-203ENST00000409022 RABL6Q3YEC7 729 aaPredicted RBP23.25■■□□□ 1.31
PTPN18-203ENST00000409022 TTLL5Q6EMB2 1281 aa23.25■■□□□ 1.31
PTPN18-203ENST00000409022 KRT26Q7Z3Y9 468 aa23.25■■□□□ 1.31
PTPN18-203ENST00000409022 SULF1Q8IWU6 871 aa23.25■■□□□ 1.31
PTPN18-203ENST00000409022 HELBQ8NG08 1087 aaPredicted RBP23.25■■□□□ 1.31
PTPN18-203ENST00000409022 ZNF594Q96JF6 807 aaPredicted RBP23.25■■□□□ 1.31
PTPN18-203ENST00000409022 VEGFBP49765 207 aa23.24■■□□□ 1.31
PTPN18-203ENST00000409022 DACT2Q5SW24 774 aa23.24■■□□□ 1.31
PTPN18-203ENST00000409022 PAXIP1Q6ZW49 1069 aaPredicted RBP23.24■■□□□ 1.31
PTPN18-203ENST00000409022 USP48Q86UV5 1035 aa23.24■■□□□ 1.31
PTPN18-203ENST00000409022 TXNRD3Q86VQ6 643 aa23.24■■□□□ 1.31
PTPN18-203ENST00000409022 GMLQ99445 158 aa23.24■■□□□ 1.31
PTPN18-203ENST00000409022 ZNF408Q9H9D4 720 aa23.24■■□□□ 1.31
PTPN18-203ENST00000409022 MYOZ2Q9NPC6 264 aa23.24■■□□□ 1.31
PTPN18-203ENST00000409022 HDAC9Q9UKV0 1011 aa23.24■■□□□ 1.31
PTPN18-203ENST00000409022 NOB1Q9ULX3 412 aaKnown RBP23.24■■□□□ 1.31
PTPN18-203ENST00000409022 TLL2Q9Y6L7 1015 aa23.24■■□□□ 1.31
PTPN18-203ENST00000409022 MROH5Q6ZUA9 1318 aa23.24■■□□□ 1.31
PTPN18-203ENST00000409022 PLIN1O60240 522 aa23.23■■□□□ 1.31
PTPN18-203ENST00000409022 HSPA1AP0DMV8 641 aaKnown RBP23.23■■□□□ 1.31
PTPN18-203ENST00000409022 HSPA1BP0DMV9 641 aaKnown RBP23.23■■□□□ 1.31
PTPN18-203ENST00000409022 CST9Q5W186 159 aa23.23■■□□□ 1.31
PTPN18-203ENST00000409022 KAZALD1Q96I82 304 aa23.23■■□□□ 1.31
PTPN18-203ENST00000409022 USP44Q9H0E7 712 aa23.23■■□□□ 1.31
PTPN18-203ENST00000409022 CD209Q9NNX6 404 aa23.23■■□□□ 1.31
PTPN18-203ENST00000409022 RARSP54136 660 aaKnown RBP23.22■■□□□ 1.31
PTPN18-203ENST00000409022 HNRNPUQ00839 825 aaKnown RBP eCLIP23.22■■□□□ 1.31
PTPN18-203ENST00000409022 UBE4AQ14139 1066 aa23.22■■□□□ 1.31
PTPN18-203ENST00000409022 AIDAQ96BJ3 306 aa23.22■■□□□ 1.31
PTPN18-203ENST00000409022 GGA3Q9NZ52 723 aa23.22■■□□□ 1.31
PTPN18-203ENST00000409022 SPEF2Q9C093 1822 aa23.22■■□□□ 1.31
PTPN18-203ENST00000409022 IPO8O15397 1037 aaKnown RBP23.21■■□□□ 1.31
PTPN18-203ENST00000409022 EGFRP00533 1210 aa23.21■■□□□ 1.31
PTPN18-203ENST00000409022 KLRK1P26718 216 aa23.21■■□□□ 1.31
PTPN18-203ENST00000409022 GTF2IP78347 998 aa23.21■■□□□ 1.31
PTPN18-203ENST00000409022 FMR1Q06787 632 aaKnown RBP eCLIP23.21■■□□□ 1.31
PTPN18-203ENST00000409022 SCARF1Q14162 830 aa23.21■■□□□ 1.31
PTPN18-203ENST00000409022 ARHGAP45Q92619 1136 aa23.21■■□□□ 1.31
PTPN18-203ENST00000409022 WDR33Q9C0J8 1336 aaKnown RBP23.2■■□□□ 1.3
PTPN18-203ENST00000409022 UBTFL1P0CB47 393 aaPredicted RBP23.2■■□□□ 1.3
PTPN18-203ENST00000409022 HHIPL1Q96JK4 782 aa23.2■■□□□ 1.3
PTPN18-203ENST00000409022 PITPNM2Q9BZ72 1349 aa23.19■■□□□ 1.3
PTPN18-203ENST00000409022 MAP2K1Q02750 393 aaPredicted RBP23.19■■□□□ 1.3
PTPN18-203ENST00000409022 SAPCD2Q86UD0 394 aa23.19■■□□□ 1.3
PTPN18-203ENST00000409022 ANKRD44Q8N8A2 993 aa23.19■■□□□ 1.3
PTPN18-203ENST00000409022 SCN9AQ15858 1988 aa23.19■■□□□ 1.3
PTPN18-203ENST00000409022 IL1R1P14778 569 aa23.18■■□□□ 1.3
PTPN18-203ENST00000409022 METTL24Q5JXM2 366 aa23.18■■□□□ 1.3
PTPN18-203ENST00000409022 ANGEL2Q5VTE6 544 aaKnown RBP23.18■■□□□ 1.3
PTPN18-203ENST00000409022 C2orf69Q8N8R5 385 aa23.18■■□□□ 1.3
PTPN18-203ENST00000409022 CAPNS2Q96L46 248 aa23.18■■□□□ 1.3
PTPN18-203ENST00000409022 SNAP23O00161 211 aa23.17■■□□□ 1.3
PTPN18-203ENST00000409022 RIPOR2Q9Y4F9 1068 aa23.17■■□□□ 1.3
PTPN18-203ENST00000409022 IRS2Q9Y4H2 1338 aa23.16■■□□□ 1.3
PTPN18-203ENST00000409022 ADM5C9JUS6 153 aa23.16■■□□□ 1.3
PTPN18-203ENST00000409022 FKBP1AP62942 108 aaKnown RBP23.16■■□□□ 1.3
PTPN18-203ENST00000409022 GRM1Q13255 1194 aa23.16■■□□□ 1.3
PTPN18-203ENST00000409022 VPS37DQ86XT2 251 aa23.16■■□□□ 1.3
PTPN18-203ENST00000409022 MXD3Q9BW11 206 aa23.16■■□□□ 1.3
PTPN18-203ENST00000409022 PUS3Q9BZE2 481 aaKnown RBP23.16■■□□□ 1.3
PTPN18-203ENST00000409022 HIBADHP31937 336 aaKnown RBP23.15■■□□□ 1.3
PTPN18-203ENST00000409022 CAVIN4Q5BKX8 364 aa23.15■■□□□ 1.3
PTPN18-203ENST00000409022 KIAA0825Q8IV33 1275 aa23.15■■□□□ 1.3
PTPN18-203ENST00000409022 BEGAINQ9BUH8 593 aa23.15■■□□□ 1.3
PTPN18-203ENST00000409022 GBA2Q9HCG7 927 aaPredicted RBP23.15■■□□□ 1.3
PTPN18-203ENST00000409022 SASH1O94885 1247 aa23.14■■□□□ 1.29
PTPN18-203ENST00000409022 CYP4F22Q6NT55 531 aa23.14■■□□□ 1.29
PTPN18-203ENST00000409022 PSME4Q14997 1843 aa23.14■■□□□ 1.29
PTPN18-203ENST00000409022 PDE8BO95263 885 aa23.13■■□□□ 1.29
PTPN18-203ENST00000409022 GNAI3P08754 354 aa23.13■■□□□ 1.29
PTPN18-203ENST00000409022 MAP2K2P36507 400 aa23.13■■□□□ 1.29
PTPN18-203ENST00000409022 HUNKP57058 714 aa23.13■■□□□ 1.29
PTPN18-203ENST00000409022 FBXO3Q9UK99 471 aa23.13■■□□□ 1.29
PTPN18-203ENST00000409022 TRPM7Q96QT4 1865 aa23.13■■□□□ 1.29
PTPN18-203ENST00000409022 WNT10BO00744 389 aa23.12■■□□□ 1.29
PTPN18-203ENST00000409022 LRRC24Q50LG9 513 aa23.12■■□□□ 1.29
PTPN18-203ENST00000409022 INTS3Q68E01 1043 aaKnown RBP23.12■■□□□ 1.29
PTPN18-203ENST00000409022 CDCA5Q96FF9 252 aa23.12■■□□□ 1.29
PTPN18-203ENST00000409022 WBP1LQ9NX94 342 aa23.12■■□□□ 1.29
PTPN18-203ENST00000409022 ASTN2O75129 1339 aaPredicted RBP23.11■■□□□ 1.29
PTPN18-203ENST00000409022 EYA2O00167 538 aa23.11■■□□□ 1.29
PTPN18-203ENST00000409022 MYO1BO43795 1136 aa23.11■■□□□ 1.29
PTPN18-203ENST00000409022 FRAT2O75474 233 aaPredicted RBP23.11■■□□□ 1.29
PTPN18-203ENST00000409022 IFIT1P09914 478 aaKnown RBP23.11■■□□□ 1.29
PTPN18-203ENST00000409022 NF2P35240 595 aa23.11■■□□□ 1.29
PTPN18-203ENST00000409022 CTCFP49711 727 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms