RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 USP17L1Q7RTZ2 530 aa28.58■■■□□ 2.17
KDELR3-202ENST00000409006 KRT26Q7Z3Y9 468 aa28.58■■■□□ 2.17
KDELR3-202ENST00000409006 MXD3Q9BW11 206 aa28.58■■■□□ 2.17
KDELR3-202ENST00000409006 ZNF804BA4D1E1 1349 aa28.58■■■□□ 2.17
KDELR3-202ENST00000409006 GRM8O00222 908 aa28.57■■■□□ 2.16
KDELR3-202ENST00000409006 CHRNDQ07001 517 aa28.57■■■□□ 2.16
KDELR3-202ENST00000409006 SNAP23O00161 211 aa28.56■■■□□ 2.16
KDELR3-202ENST00000409006 ECE1P42892 770 aa28.56■■■□□ 2.16
KDELR3-202ENST00000409006 AIDAQ96BJ3 306 aa28.56■■■□□ 2.16
KDELR3-202ENST00000409006 ANKRD2Q9GZV1 360 aa28.56■■■□□ 2.16
KDELR3-202ENST00000409006 CHMP3Q9Y3E7 222 aa28.56■■■□□ 2.16
KDELR3-202ENST00000409006 AOC2O75106 756 aa28.55■■■□□ 2.16
KDELR3-202ENST00000409006 LMBR1LQ6UX01 489 aa28.55■■■□□ 2.16
KDELR3-202ENST00000409006 MRPL50Q8N5N7 158 aaKnown RBP28.55■■■□□ 2.16
KDELR3-202ENST00000409006 DCPSQ96C86 337 aaKnown RBP28.55■■■□□ 2.16
KDELR3-202ENST00000409006 GGA3Q9NZ52 723 aa28.55■■■□□ 2.16
KDELR3-202ENST00000409006 ALDH1L1O75891 902 aa28.54■■■□□ 2.16
KDELR3-202ENST00000409006 USP17L8P0C7I0 530 aa28.54■■■□□ 2.16
KDELR3-202ENST00000409006 IFIT5Q13325 482 aaKnown RBP28.54■■■□□ 2.16
KDELR3-202ENST00000409006 DACT2Q5SW24 774 aa28.54■■■□□ 2.16
KDELR3-202ENST00000409006 HELBQ8NG08 1087 aaPredicted RBP28.54■■■□□ 2.16
KDELR3-202ENST00000409006 ZNF594Q96JF6 807 aaPredicted RBP28.54■■■□□ 2.16
KDELR3-202ENST00000409006 COA1Q9GZY4 146 aa28.54■■■□□ 2.16
KDELR3-202ENST00000409006 TAF5LO75529 589 aa28.53■■■□□ 2.16
KDELR3-202ENST00000409006 CTCFP49711 727 aaPredicted RBP28.53■■■□□ 2.16
KDELR3-202ENST00000409006 SLFN5Q08AF3 891 aa28.53■■■□□ 2.16
KDELR3-202ENST00000409006 SCARF1Q14162 830 aa28.53■■■□□ 2.16
KDELR3-202ENST00000409006 SRCIN1Q9C0H9 1055 aa28.53■■■□□ 2.16
KDELR3-202ENST00000409006 C9orf78Q9NZ63 289 aaPredicted RBP28.53■■■□□ 2.16
KDELR3-202ENST00000409006 IRS2Q9Y4H2 1338 aa28.52■■■□□ 2.16
KDELR3-202ENST00000409006 E9PSI1 815 aa28.52■■■□□ 2.16
KDELR3-202ENST00000409006 MAP2K1Q02750 393 aaPredicted RBP28.52■■■□□ 2.16
KDELR3-202ENST00000409006 FBXW7Q969H0 707 aa28.52■■■□□ 2.16
KDELR3-202ENST00000409006 CDCA7LQ96GN5 454 aa28.52■■■□□ 2.16
KDELR3-202ENST00000409006 MYOZ2Q9NPC6 264 aa28.52■■■□□ 2.16
KDELR3-202ENST00000409006 LBX1P52954 281 aa28.51■■■□□ 2.15
KDELR3-202ENST00000409006 ANGEL2Q5VTE6 544 aaKnown RBP28.51■■■□□ 2.15
KDELR3-202ENST00000409006 KAZALD1Q96I82 304 aa28.51■■■□□ 2.15
KDELR3-202ENST00000409006 HHIPL1Q96JK4 782 aa28.51■■■□□ 2.15
KDELR3-202ENST00000409006 STRIP1Q5VSL9 837 aa28.5■■■□□ 2.15
KDELR3-202ENST00000409006 SSH1Q8WYL5 1049 aa28.5■■■□□ 2.15
KDELR3-202ENST00000409006 SUCLG2Q96I99 432 aa28.5■■■□□ 2.15
KDELR3-202ENST00000409006 PRDM10Q9NQV6 1147 aa28.5■■■□□ 2.15
KDELR3-202ENST00000409006 NBPF7P0C2Y1 421 aaPredicted RBP28.49■■■□□ 2.15
KDELR3-202ENST00000409006 HSPA8P11142 646 aaKnown RBP28.49■■■□□ 2.15
KDELR3-202ENST00000409006 KCNJ4P48050 445 aa28.49■■■□□ 2.15
KDELR3-202ENST00000409006 SCAF8Q9UPN6 1271 aaKnown RBP28.49■■■□□ 2.15
KDELR3-202ENST00000409006 HUNKP57058 714 aa28.48■■■□□ 2.15
KDELR3-202ENST00000409006 SULF1Q8IWU6 871 aa28.48■■■□□ 2.15
KDELR3-202ENST00000409006 CAPN15O75808 1086 aa28.47■■■□□ 2.15
KDELR3-202ENST00000409006 MAP2K2P36507 400 aa28.47■■■□□ 2.15
KDELR3-202ENST00000409006 CCDC57Q2TAC2 916 aa28.47■■■□□ 2.15
KDELR3-202ENST00000409006 TTLL5Q6EMB2 1281 aa28.47■■■□□ 2.15
KDELR3-202ENST00000409006 GBA2Q9HCG7 927 aaPredicted RBP28.47■■■□□ 2.15
KDELR3-202ENST00000409006 CD209Q9NNX6 404 aa28.47■■■□□ 2.15
KDELR3-202ENST00000409006 NBPF9Q3BBW0 867 aa28.46■■■□□ 2.15
KDELR3-202ENST00000409006 CDCA5Q96FF9 252 aa28.46■■■□□ 2.15
KDELR3-202ENST00000409006 ZIC5Q96T25 663 aa28.46■■■□□ 2.15
KDELR3-202ENST00000409006 UTYO14607 1347 aa28.45■■■□□ 2.15
KDELR3-202ENST00000409006 GTF2IP78347 998 aa28.45■■■□□ 2.14
KDELR3-202ENST00000409006 LDHAL6AQ6ZMR3 332 aa28.45■■■□□ 2.14
KDELR3-202ENST00000409006 PLIN1O60240 522 aa28.44■■■□□ 2.14
KDELR3-202ENST00000409006 C15orf52Q6ZUT6 534 aaKnown RBP28.44■■■□□ 2.14
KDELR3-202ENST00000409006 MYO3BQ8WXR4 1341 aa28.43■■■□□ 2.14
KDELR3-202ENST00000409006 TAF7LQ5H9L4 462 aa28.43■■■□□ 2.14
KDELR3-202ENST00000409006 TRMT2AQ8IZ69 625 aaKnown RBP28.43■■■□□ 2.14
KDELR3-202ENST00000409006 C2orf69Q8N8R5 385 aa28.43■■■□□ 2.14
KDELR3-202ENST00000409006 CNNM1Q9NRU3 951 aa28.43■■■□□ 2.14
KDELR3-202ENST00000409006 PTPRCP08575 1304 aa28.43■■■□□ 2.14
KDELR3-202ENST00000409006 WNT10BO00744 389 aa28.42■■■□□ 2.14
KDELR3-202ENST00000409006 KIAA0825Q8IV33 1275 aa28.42■■■□□ 2.14
KDELR3-202ENST00000409006 PUS3Q9BZE2 481 aaKnown RBP28.42■■■□□ 2.14
KDELR3-202ENST00000409006 TSKSQ9UJT2 592 aa28.42■■■□□ 2.14
KDELR3-202ENST00000409006 PITPNM2Q9BZ72 1349 aa28.42■■■□□ 2.14
KDELR3-202ENST00000409006 FAM155AB1AL88 458 aaPredicted RBP28.41■■■□□ 2.14
KDELR3-202ENST00000409006 RGMBQ6NW40 437 aa28.41■■■□□ 2.14
KDELR3-202ENST00000409006 OGFOD1Q8N543 542 aa28.41■■■□□ 2.14
KDELR3-202ENST00000409006 BICC1Q9H694 974 aaKnown RBP28.41■■■□□ 2.14
KDELR3-202ENST00000409006 CCER2I3L3R5 266 aa28.4■■■□□ 2.14
KDELR3-202ENST00000409006 SASH1O94885 1247 aa28.4■■■□□ 2.14
KDELR3-202ENST00000409006 CERS5Q8N5B7 392 aa28.4■■■□□ 2.14
KDELR3-202ENST00000409006 BEGAINQ9BUH8 593 aa28.4■■■□□ 2.14
KDELR3-202ENST00000409006 PRAMEF18Q5VWM3 479 aa28.39■■■□□ 2.14
KDELR3-202ENST00000409006 ANKRD44Q8N8A2 993 aa28.39■■■□□ 2.14
KDELR3-202ENST00000409006 ECM29Q5VYK3 1845 aa28.39■■■□□ 2.13
KDELR3-202ENST00000409006 IL1R1P14778 569 aa28.38■■■□□ 2.13
KDELR3-202ENST00000409006 RABL6Q3YEC7 729 aaPredicted RBP28.38■■■□□ 2.13
KDELR3-202ENST00000409006 PAPPA2Q9BXP8 1791 aa28.37■■■□□ 2.13
KDELR3-202ENST00000409006 CASP8AP2Q9UKL3 1982 aa28.37■■■□□ 2.13
KDELR3-202ENST00000409006 BRPF1P55201 1214 aaPredicted RBP28.37■■■□□ 2.13
KDELR3-202ENST00000409006 NOGQ13253 232 aa28.37■■■□□ 2.13
KDELR3-202ENST00000409006 ALDH1L2Q3SY69 923 aa28.37■■■□□ 2.13
KDELR3-202ENST00000409006 ZBED3Q96IU2 234 aaPredicted RBP28.37■■■□□ 2.13
KDELR3-202ENST00000409006 USP44Q9H0E7 712 aa28.37■■■□□ 2.13
KDELR3-202ENST00000409006 JAG2Q9Y219 1238 aa28.37■■■□□ 2.13
KDELR3-202ENST00000409006 ZNF804AQ7Z570 1209 aa28.36■■■□□ 2.13
KDELR3-202ENST00000409006 RIPOR2Q9Y4F9 1068 aa28.36■■■□□ 2.13
KDELR3-202ENST00000409006 ZNF157P51786 506 aaPredicted RBP28.35■■■□□ 2.13
KDELR3-202ENST00000409006 MOB2Q70IA6 237 aa28.35■■■□□ 2.13
KDELR3-202ENST00000409006 SMC4Q9NTJ3 1288 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms