RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 ITGB4P16144 1822 aa19.87■□□□□ 0.77
NUP50-203ENST00000407019 A0A0G2JLW4 131 aa19.87■□□□□ 0.77
NUP50-203ENST00000407019 CCDC192P0DO97 292 aa19.87■□□□□ 0.77
NUP50-203ENST00000407019 LIG1P18858 919 aa19.87■□□□□ 0.77
NUP50-203ENST00000407019 NSUN7Q8NE18 718 aaKnown RBP19.87■□□□□ 0.77
NUP50-203ENST00000407019 LRP6O75581 1613 aa19.86■□□□□ 0.77
NUP50-203ENST00000407019 HMGN5P82970 282 aaKnown RBP19.86■□□□□ 0.77
NUP50-203ENST00000407019 HLFQ16534 295 aa19.86■□□□□ 0.77
NUP50-203ENST00000407019 NLRP10Q86W26 655 aa19.86■□□□□ 0.77
NUP50-203ENST00000407019 CTNNA3Q9UI47 895 aa19.86■□□□□ 0.77
NUP50-203ENST00000407019 KIF3AQ9Y496 699 aa19.86■□□□□ 0.77
NUP50-203ENST00000407019 BCL9O00512 1426 aa19.86■□□□□ 0.77
NUP50-203ENST00000407019 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.86■□□□□ 0.77
NUP50-203ENST00000407019 GPTP24298 496 aa19.85■□□□□ 0.77
NUP50-203ENST00000407019 WASHC4Q2M389 1173 aa19.85■□□□□ 0.77
NUP50-203ENST00000407019 PTPDC1A2A3K4 754 aa19.85■□□□□ 0.77
NUP50-203ENST00000407019 ADCY5O95622 1261 aa19.85■□□□□ 0.77
NUP50-203ENST00000407019 SCARF1Q14162 830 aa19.85■□□□□ 0.77
NUP50-203ENST00000407019 MAP3K11Q16584 847 aa19.85■□□□□ 0.77
NUP50-203ENST00000407019 ATP2B3Q16720 1220 aa19.85■□□□□ 0.77
NUP50-203ENST00000407019 METTL24Q5JXM2 366 aa19.85■□□□□ 0.77
NUP50-203ENST00000407019 NAA16Q6N069 864 aaPredicted RBP19.85■□□□□ 0.77
NUP50-203ENST00000407019 KDM4AO75164 1064 aa19.84■□□□□ 0.77
NUP50-203ENST00000407019 CTDNEP1O95476 244 aa19.84■□□□□ 0.77
NUP50-203ENST00000407019 CYP19A1P11511 503 aaPredicted RBP19.84■□□□□ 0.77
NUP50-203ENST00000407019 ZAP70P43403 619 aa19.84■□□□□ 0.77
NUP50-203ENST00000407019 TTLL5Q6EMB2 1281 aa19.84■□□□□ 0.77
NUP50-203ENST00000407019 DDX19AQ9NUU7 478 aaKnown RBP19.84■□□□□ 0.77
NUP50-203ENST00000407019 COL14A1Q05707 1796 aaKnown RBP19.84■□□□□ 0.77
NUP50-203ENST00000407019 ITGA6P23229 1130 aa19.83■□□□□ 0.77
NUP50-203ENST00000407019 CTSWP56202 376 aa19.83■□□□□ 0.77
NUP50-203ENST00000407019 SYNE4Q8N205 404 aa19.83■□□□□ 0.77
NUP50-203ENST00000407019 TTLL11Q8NHH1 800 aa19.83■□□□□ 0.77
NUP50-203ENST00000407019 APPBP2Q92624 585 aa19.83■□□□□ 0.77
NUP50-203ENST00000407019 CHMP4CQ96CF2 233 aa19.83■□□□□ 0.77
NUP50-203ENST00000407019 ZNF274Q96GC6 653 aaPredicted RBP19.83■□□□□ 0.77
NUP50-203ENST00000407019 RIPOR2Q9Y4F9 1068 aa19.83■□□□□ 0.77
NUP50-203ENST00000407019 ANKRD18BA2A2Z9 1011 aa19.83■□□□□ 0.76
NUP50-203ENST00000407019 IMMTQ16891 758 aaKnown RBP19.83■□□□□ 0.76
NUP50-203ENST00000407019 LDHAL6AQ6ZMR3 332 aa19.83■□□□□ 0.76
NUP50-203ENST00000407019 GREM2Q9H772 168 aa19.83■□□□□ 0.76
NUP50-203ENST00000407019 DACT1Q9NYF0 836 aa19.83■□□□□ 0.76
NUP50-203ENST00000407019 CFAP45Q9UL16 551 aa19.83■□□□□ 0.76
NUP50-203ENST00000407019 ANKRD36CQ5JPF3 1778 aa19.83■□□□□ 0.76
NUP50-203ENST00000407019 CCT2P78371 535 aaKnown RBP19.82■□□□□ 0.76
NUP50-203ENST00000407019 SLC4A9Q96Q91 983 aa19.82■□□□□ 0.76
NUP50-203ENST00000407019 TNMDQ9H2S6 317 aa19.82■□□□□ 0.76
NUP50-203ENST00000407019 NAP1L2Q9ULW6 460 aaPredicted RBP19.82■□□□□ 0.76
NUP50-203ENST00000407019 FOXP2O15409 715 aa19.82■□□□□ 0.76
NUP50-203ENST00000407019 PDIA3P30101 505 aaKnown RBP19.82■□□□□ 0.76
NUP50-203ENST00000407019 FBXL16Q8N461 479 aa19.82■□□□□ 0.76
NUP50-203ENST00000407019 BICD2Q8TD16 824 aa19.82■□□□□ 0.76
NUP50-203ENST00000407019 ZBTB1Q9Y2K1 713 aa19.82■□□□□ 0.76
NUP50-203ENST00000407019 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.82■□□□□ 0.76
NUP50-203ENST00000407019 PLCH1Q4KWH8 1693 aa19.81■□□□□ 0.76
NUP50-203ENST00000407019 IRS4O14654 1257 aaPredicted RBP19.81■□□□□ 0.76
NUP50-203ENST00000407019 CAMK4Q16566 473 aa19.81■□□□□ 0.76
NUP50-203ENST00000407019 CHST3Q7LGC8 479 aa19.81■□□□□ 0.76
NUP50-203ENST00000407019 PGBD1Q96JS3 809 aa19.81■□□□□ 0.76
NUP50-203ENST00000407019 CNNM1Q9NRU3 951 aa19.81■□□□□ 0.76
NUP50-203ENST00000407019 SALL1Q9NSC2 1324 aa19.81■□□□□ 0.76
NUP50-203ENST00000407019 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.8■□□□□ 0.76
NUP50-203ENST00000407019 CLSTN2Q9H4D0 955 aa19.8■□□□□ 0.76
NUP50-203ENST00000407019 NCOA5Q9HCD5 579 aaKnown RBP19.8■□□□□ 0.76
NUP50-203ENST00000407019 NWD2Q9ULI1 1742 aa19.8■□□□□ 0.76
NUP50-203ENST00000407019 TPM2P07951 284 aa19.8■□□□□ 0.76
NUP50-203ENST00000407019 TYRO3Q06418 890 aa19.8■□□□□ 0.76
NUP50-203ENST00000407019 PI16Q6UXB8 463 aa19.8■□□□□ 0.76
NUP50-203ENST00000407019 TRMT112Q9UI30 125 aaKnown RBP19.8■□□□□ 0.76
NUP50-203ENST00000407019 KDM4FA0A1W2PPD8 638 aa19.79■□□□□ 0.76
NUP50-203ENST00000407019 FOSBP53539 338 aa19.79■□□□□ 0.76
NUP50-203ENST00000407019 EVCP57679 992 aa19.79■□□□□ 0.76
NUP50-203ENST00000407019 HAND2P61296 217 aa19.79■□□□□ 0.76
NUP50-203ENST00000407019 RBM43Q6ZSC3 357 aaKnown RBP19.79■□□□□ 0.76
NUP50-203ENST00000407019 FAM200AQ8TCP9 573 aa19.79■□□□□ 0.76
NUP50-203ENST00000407019 ZNF512BQ96KM6 892 aaPredicted RBP19.79■□□□□ 0.76
NUP50-203ENST00000407019 PUS7LQ9H0K6 701 aaKnown RBP19.79■□□□□ 0.76
NUP50-203ENST00000407019 ERVV-1B6SEH8 477 aa19.79■□□□□ 0.76
NUP50-203ENST00000407019 EXOC5O00471 708 aa19.79■□□□□ 0.76
NUP50-203ENST00000407019 PDE8AO60658 829 aa19.79■□□□□ 0.76
NUP50-203ENST00000407019 FGAP02671 866 aa19.79■□□□□ 0.76
NUP50-203ENST00000407019 MCAMP43121 646 aa19.79■□□□□ 0.76
NUP50-203ENST00000407019 ZSCAN25Q6NSZ9 544 aa19.79■□□□□ 0.76
NUP50-203ENST00000407019 SYTL4Q96C24 671 aaPredicted RBP19.79■□□□□ 0.76
NUP50-203ENST00000407019 MRVI1Q9Y6F6 885 aa19.79■□□□□ 0.76
NUP50-203ENST00000407019 GPAA1O43292 621 aa19.78■□□□□ 0.76
NUP50-203ENST00000407019 KIAA2012Q0VF49 1180 aa19.78■□□□□ 0.76
NUP50-203ENST00000407019 VGLL2Q8N8G2 317 aa19.78■□□□□ 0.76
NUP50-203ENST00000407019 NR1I2O75469 434 aa19.77■□□□□ 0.76
NUP50-203ENST00000407019 IL6STP40189 918 aaPredicted RBP19.77■□□□□ 0.76
NUP50-203ENST00000407019 PLCB2Q00722 1185 aa19.77■□□□□ 0.76
NUP50-203ENST00000407019 TTF1Q15361 905 aaPredicted RBP19.77■□□□□ 0.76
NUP50-203ENST00000407019 DZIP3Q86Y13 1208 aaKnown RBP19.77■□□□□ 0.76
NUP50-203ENST00000407019 CKAP2LQ8IYA6 745 aa19.77■□□□□ 0.76
NUP50-203ENST00000407019 MYH3P11055 1940 aa19.77■□□□□ 0.76
NUP50-203ENST00000407019 ADD1P35611 737 aaKnown RBP19.77■□□□□ 0.75
NUP50-203ENST00000407019 ATL3Q6DD88 541 aa19.77■□□□□ 0.75
NUP50-203ENST00000407019 MB21D2Q8IYB1 491 aaPredicted RBP19.77■□□□□ 0.75
NUP50-203ENST00000407019 MYH7P12883 1935 aa19.77■□□□□ 0.75
NUP50-203ENST00000407019 MYH15Q9Y2K3 1946 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms