RNA–Protein interactions for RNA: ENST00000405053.7

PDE4D-206, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 512 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-206ENST00000405053 MED23Q9ULK4 1368 aa13.28□□□□□ -0.28
PDE4D-206ENST00000405053 IFIT2P09913 472 aaKnown RBP13.27□□□□□ -0.29
PDE4D-206ENST00000405053 PDE4AP27815 886 aa13.27□□□□□ -0.29
PDE4D-206ENST00000405053 KCNJ4P48050 445 aa13.27□□□□□ -0.29
PDE4D-206ENST00000405053 FKBP4Q02790 459 aaKnown RBP eCLIP13.27□□□□□ -0.29
PDE4D-206ENST00000405053 C16orf71Q8IYS4 520 aaPredicted RBP13.27□□□□□ -0.29
PDE4D-206ENST00000405053 SUPT20HQ8NEM7 779 aa13.27□□□□□ -0.29
PDE4D-206ENST00000405053 DBNDD2Q9BQY9 259 aa13.27□□□□□ -0.29
PDE4D-206ENST00000405053 CCDC8Q9H0W5 538 aaPredicted RBP13.27□□□□□ -0.29
PDE4D-206ENST00000405053 VPS33BQ9H267 617 aa13.27□□□□□ -0.29
PDE4D-206ENST00000405053 TLR7Q9NYK1 1049 aaKnown RBP13.27□□□□□ -0.29
PDE4D-206ENST00000405053 STAP2Q9UGK3 403 aa13.27□□□□□ -0.29
PDE4D-206ENST00000405053 LTBP3Q9NS15 1303 aa13.27□□□□□ -0.29
PDE4D-206ENST00000405053 FER1L6Q2WGJ9 1857 aa13.27□□□□□ -0.29
PDE4D-206ENST00000405053 C6orf229H3BNL8 230 aa13.26□□□□□ -0.29
PDE4D-206ENST00000405053 ADORA1P30542 326 aa13.26□□□□□ -0.29
PDE4D-206ENST00000405053 FBXO33Q7Z6M2 555 aa13.26□□□□□ -0.29
PDE4D-206ENST00000405053 OTUD7AQ8TE49 926 aaPredicted RBP13.26□□□□□ -0.29
PDE4D-206ENST00000405053 ZNF512BQ96KM6 892 aaPredicted RBP13.26□□□□□ -0.29
PDE4D-206ENST00000405053 FAM84BQ96KN1 310 aaPredicted RBP13.26□□□□□ -0.29
PDE4D-206ENST00000405053 NEUROD6Q96NK8 337 aa13.26□□□□□ -0.29
PDE4D-206ENST00000405053 EYA3Q99504 573 aa13.26□□□□□ -0.29
PDE4D-206ENST00000405053 OSBPL3Q9H4L5 887 aa13.26□□□□□ -0.29
PDE4D-206ENST00000405053 WWC3Q9ULE0 1092 aa13.26□□□□□ -0.29
PDE4D-206ENST00000405053 TTC41PQ6P2S7 1318 aa13.25□□□□□ -0.29
PDE4D-206ENST00000405053 NFKBIEO00221 500 aa13.25□□□□□ -0.29
PDE4D-206ENST00000405053 YBX3P16989 372 aaKnown RBP eCLIP13.25□□□□□ -0.29
PDE4D-206ENST00000405053 MX1P20591 662 aa13.25□□□□□ -0.29
PDE4D-206ENST00000405053 KLRK1P26718 216 aa13.25□□□□□ -0.29
PDE4D-206ENST00000405053 TXNRD3Q86VQ6 643 aa13.25□□□□□ -0.29
PDE4D-206ENST00000405053 PLEKHM2Q8IWE5 1019 aa13.25□□□□□ -0.29
PDE4D-206ENST00000405053 TAOK3Q9H2K8 898 aa13.25□□□□□ -0.29
PDE4D-206ENST00000405053 AOX1Q06278 1338 aa13.24□□□□□ -0.29
PDE4D-206ENST00000405053 ARID4AP29374 1257 aaPredicted RBP13.24□□□□□ -0.29
PDE4D-206ENST00000405053 PDE1AP54750 535 aa13.24□□□□□ -0.29
PDE4D-206ENST00000405053 KIAA2012Q0VF49 1180 aa13.24□□□□□ -0.29
PDE4D-206ENST00000405053 WASHC4Q2M389 1173 aa13.24□□□□□ -0.29
PDE4D-206ENST00000405053 CAVIN4Q5BKX8 364 aa13.24□□□□□ -0.29
PDE4D-206ENST00000405053 CCDC158Q5M9N0 1113 aa13.24□□□□□ -0.29
PDE4D-206ENST00000405053 CCDC102BQ68D86 513 aa13.24□□□□□ -0.29
PDE4D-206ENST00000405053 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.24□□□□□ -0.29
PDE4D-206ENST00000405053 GPATCH3Q96I76 525 aa13.24□□□□□ -0.29
PDE4D-206ENST00000405053 ZC3H12CQ9C0D7 883 aaKnown RBP13.24□□□□□ -0.29
PDE4D-206ENST00000405053 ECHDC1Q9NTX5 307 aa13.24□□□□□ -0.29
PDE4D-206ENST00000405053 ATP5JP18859 108 aa13.23□□□□□ -0.29
PDE4D-206ENST00000405053 HIBADHP31937 336 aaKnown RBP13.23□□□□□ -0.29
PDE4D-206ENST00000405053 PHKA1P46020 1223 aa13.23□□□□□ -0.29
PDE4D-206ENST00000405053 GYG1P46976 350 aa13.23□□□□□ -0.29
PDE4D-206ENST00000405053 BCAMP50895 628 aa13.23□□□□□ -0.29
PDE4D-206ENST00000405053 GORABQ5T7V8 394 aa13.23□□□□□ -0.29
PDE4D-206ENST00000405053 ZNF804AQ7Z570 1209 aa13.23□□□□□ -0.29
PDE4D-206ENST00000405053 GPR101Q96P66 508 aaPredicted RBP13.23□□□□□ -0.29
PDE4D-206ENST00000405053 COA1Q9GZY4 146 aa13.23□□□□□ -0.29
PDE4D-206ENST00000405053 SEMA3EO15041 775 aa13.22□□□□□ -0.29
PDE4D-206ENST00000405053 UQCRFS1P1P0C7P4 283 aa13.22□□□□□ -0.29
PDE4D-206ENST00000405053 IL1R1P14778 569 aa13.22□□□□□ -0.29
PDE4D-206ENST00000405053 PI4K2BQ8TCG2 481 aa13.22□□□□□ -0.29
PDE4D-206ENST00000405053 GNL3LQ9NVN8 582 aaKnown RBP13.22□□□□□ -0.29
PDE4D-206ENST00000405053 UTRNP46939 3433 aa13.22□□□□□ -0.29
PDE4D-206ENST00000405053 PDS5AQ29RF7 1337 aaKnown RBP13.21□□□□□ -0.29
PDE4D-206ENST00000405053 ERC2O15083 957 aa13.21□□□□□ -0.29
PDE4D-206ENST00000405053 GLRX3O76003 335 aaKnown RBP13.21□□□□□ -0.29
PDE4D-206ENST00000405053 IARSP41252 1262 aaKnown RBP13.21□□□□□ -0.29
PDE4D-206ENST00000405053 TTC39AQ5SRH9 613 aa13.21□□□□□ -0.29
PDE4D-206ENST00000405053 SKAP1Q86WV1 359 aa13.21□□□□□ -0.29
PDE4D-206ENST00000405053 VPS37DQ86XT2 251 aa13.21□□□□□ -0.29
PDE4D-206ENST00000405053 TDRD7Q8NHU6 1098 aaKnown RBP13.21□□□□□ -0.29
PDE4D-206ENST00000405053 BCL11AQ9H165 835 aa13.21□□□□□ -0.29
PDE4D-206ENST00000405053 CD209Q9NNX6 404 aa13.21□□□□□ -0.29
PDE4D-206ENST00000405053 ZNF277Q9NRM2 450 aaPredicted RBP13.21□□□□□ -0.29
PDE4D-206ENST00000405053 RIMBP2O15034 1052 aa13.2□□□□□ -0.3
PDE4D-206ENST00000405053 PPIP5K2O43314 1243 aa13.2□□□□□ -0.3
PDE4D-206ENST00000405053 GRIN3BO60391 1043 aa13.2□□□□□ -0.3
PDE4D-206ENST00000405053 PRELPP51888 382 aa13.2□□□□□ -0.3
PDE4D-206ENST00000405053 RASGRF1Q13972 1273 aa13.2□□□□□ -0.3
PDE4D-206ENST00000405053 AOC3Q16853 763 aa13.2□□□□□ -0.3
PDE4D-206ENST00000405053 TSHZ3Q63HK5 1081 aa13.2□□□□□ -0.3
PDE4D-206ENST00000405053 ARHGAP27Q6ZUM4 889 aa13.2□□□□□ -0.3
PDE4D-206ENST00000405053 PODNQ7Z5L7 613 aa13.2□□□□□ -0.3
PDE4D-206ENST00000405053 COL4A5P29400 1685 aa13.19□□□□□ -0.3
PDE4D-206ENST00000405053 MCAMP43121 646 aa13.19□□□□□ -0.3
PDE4D-206ENST00000405053 RASSF7Q02833 373 aa13.19□□□□□ -0.3
PDE4D-206ENST00000405053 SCARF1Q14162 830 aa13.19□□□□□ -0.3
PDE4D-206ENST00000405053 GPR162Q16538 588 aa13.19□□□□□ -0.3
PDE4D-206ENST00000405053 PELP1Q8IZL8 1130 aaKnown RBP13.19□□□□□ -0.3
PDE4D-206ENST00000405053 LARGE2Q8N3Y3 721 aa13.19□□□□□ -0.3
PDE4D-206ENST00000405053 HAUS7Q99871 368 aa13.19□□□□□ -0.3
PDE4D-206ENST00000405053 HMG20BQ9P0W2 317 aa13.19□□□□□ -0.3
PDE4D-206ENST00000405053 DENND2AQ9ULE3 1009 aa13.19□□□□□ -0.3
PDE4D-206ENST00000405053 AKAP11Q9UKA4 1901 aa13.19□□□□□ -0.3
PDE4D-206ENST00000405053 COL1A1P02452 1464 aaPredicted RBP13.18□□□□□ -0.3
PDE4D-206ENST00000405053 ECE2O60344 883 aa13.18□□□□□ -0.3
PDE4D-206ENST00000405053 LMNB1P20700 586 aa13.18□□□□□ -0.3
PDE4D-206ENST00000405053 RGS3P49796 1198 aa13.18□□□□□ -0.3
PDE4D-206ENST00000405053 DOK7Q18PE1 504 aa13.18□□□□□ -0.3
PDE4D-206ENST00000405053 TTC22Q5TAA0 569 aa13.18□□□□□ -0.3
PDE4D-206ENST00000405053 SPATA5Q8NB90 893 aa13.18□□□□□ -0.3
PDE4D-206ENST00000405053 BOLA2Q9H3K6 86 aa13.18□□□□□ -0.3
PDE4D-206ENST00000405053 FAM205AQ6ZU69 1335 aa13.17□□□□□ -0.3
PDE4D-206ENST00000405053 DBNDD1Q9H9R9 158 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms