RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 GPR101Q96P66 508 aaPredicted RBP4.48□□□□□ -1.69
RTN4-208ENST00000404909 ZNF219Q9P2Y4 722 aaPredicted RBP4.48□□□□□ -1.69
RTN4-208ENST00000404909 PPP1R1BQ9UD71 204 aaPredicted RBP4.48□□□□□ -1.69
RTN4-208ENST00000404909 RGPD3A6NKT7 1758 aaPredicted RBP4.48□□□□□ -1.69
RTN4-208ENST00000404909 RGPD4Q7Z3J3 1758 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 TNRC6CQ9HCJ0 1690 aaKnown RBP4.48□□□□□ -1.69
RTN4-208ENST00000404909 ZNF804BA4D1E1 1349 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 A0A0D9SFI3 127 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 PSDA5PKW4 1024 aaPredicted RBP4.48□□□□□ -1.69
RTN4-208ENST00000404909 H0YIN7 160 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 HIP1O00291 1037 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 EIF5BO60841 1220 aaKnown RBP4.48□□□□□ -1.69
RTN4-208ENST00000404909 IDH1O75874 414 aaKnown RBP4.48□□□□□ -1.69
RTN4-208ENST00000404909 BBOX1O75936 387 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 UQCRFS1P1P0C7P4 283 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 RASGRF1Q13972 1273 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 OLFM4Q6UX06 510 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 C2CD5Q86YS7 1000 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 KBTBD3Q8NAB2 608 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 RUFY2Q8WXA3 655 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 WWC3Q9ULE0 1092 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 LAMB2P55268 1798 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 KLRG2A4D1S0 409 aaPredicted RBP4.48□□□□□ -1.69
RTN4-208ENST00000404909 PPEF1O14829 653 aaPredicted RBP4.48□□□□□ -1.69
RTN4-208ENST00000404909 SGSM2O43147 1006 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 NPR1P16066 1061 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 HOXA10P31260 410 aaPredicted RBP4.48□□□□□ -1.69
RTN4-208ENST00000404909 WASHC4Q2M389 1173 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 KLHL34Q8N239 644 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 SPATA5Q8NB90 893 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 MASTLQ96GX5 879 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 CRAMP1Q96RY5 1269 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 USP26Q9BXU7 913 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 TMX4Q9H1E5 349 aaPredicted RBP4.48□□□□□ -1.69
RTN4-208ENST00000404909 GNL3LQ9NVN8 582 aaKnown RBP4.48□□□□□ -1.69
RTN4-208ENST00000404909 HMG20BQ9P0W2 317 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 JAG2Q9Y219 1238 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 SPEF2Q9C093 1822 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 XDHP47989 1333 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 C6orf229H3BNL8 230 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 UFL1O94874 794 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 CYP2E1P05181 493 aaPredicted RBP4.48□□□□□ -1.69
RTN4-208ENST00000404909 ALDH1B1P30837 517 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 GPSM2P81274 684 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 TXNRD3Q86VQ6 643 aa4.48□□□□□ -1.69
RTN4-208ENST00000404909 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.48□□□□□ -1.694e-6■■□□□ 11.4
RTN4-208ENST00000404909 FAM84BQ96KN1 310 aaPredicted RBP4.48□□□□□ -1.69
RTN4-208ENST00000404909 SEC62Q99442 399 aaKnown RBP4.48□□□□□ -1.69
RTN4-208ENST00000404909 LRP5O75197 1615 aa4.47□□□□□ -1.69
RTN4-208ENST00000404909 ARID4AP29374 1257 aaPredicted RBP4.47□□□□□ -1.69
RTN4-208ENST00000404909 HIBADHP31937 336 aaKnown RBP4.47□□□□□ -1.69
RTN4-208ENST00000404909 SLC4A3P48751 1232 aa4.47□□□□□ -1.69
RTN4-208ENST00000404909 CCDC129Q6ZRS4 1044 aa4.47□□□□□ -1.69
RTN4-208ENST00000404909 SLC16A10Q8TF71 515 aa4.47□□□□□ -1.69
RTN4-208ENST00000404909 DAXXQ9UER7 740 aaPredicted RBP4.47□□□□□ -1.69
RTN4-208ENST00000404909 ABCF2Q9UG63 623 aa4.47□□□□□ -1.69
RTN4-208ENST00000404909 GGA1Q9UJY5 639 aa4.47□□□□□ -1.69
RTN4-208ENST00000404909 CHAF1AQ13111 956 aaPredicted RBP4.47□□□□□ -1.69
RTN4-208ENST00000404909 SLC9C2Q5TAH2 1124 aa4.47□□□□□ -1.69
RTN4-208ENST00000404909 ZNF589Q86UQ0 364 aaPredicted RBP4.47□□□□□ -1.69
RTN4-208ENST00000404909 ZNF512BQ96KM6 892 aaPredicted RBP4.47□□□□□ -1.69
RTN4-208ENST00000404909 IPO9Q96P70 1041 aaKnown RBP4.47□□□□□ -1.69
RTN4-208ENST00000404909 PIH1D3Q9NQM4 214 aaKnown RBP4.47□□□□□ -1.69
RTN4-208ENST00000404909 RNF113AO15541 343 aaKnown RBP4.47□□□□□ -1.69
RTN4-208ENST00000404909 MCCP23508 829 aa4.47□□□□□ -1.69
RTN4-208ENST00000404909 POLD1P28340 1107 aa4.47□□□□□ -1.69
RTN4-208ENST00000404909 RBM25P49756 843 aaKnown RBP4.47□□□□□ -1.69
RTN4-208ENST00000404909 TTF1Q15361 905 aaPredicted RBP4.47□□□□□ -1.69
RTN4-208ENST00000404909 LRRFIP1Q32MZ4 808 aaKnown RBP4.47□□□□□ -1.69
RTN4-208ENST00000404909 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.47□□□□□ -1.69
RTN4-208ENST00000404909 LRP2BPQ9P2M1 347 aa4.47□□□□□ -1.69
RTN4-208ENST00000404909 LEMD3Q9Y2U8 911 aa4.47□□□□□ -1.69
RTN4-208ENST00000404909 AK9Q5TCS8 1911 aa4.47□□□□□ -1.69
RTN4-208ENST00000404909 A0A0G2JLW4 131 aa4.46□□□□□ -1.69
RTN4-208ENST00000404909 RIMBP2O15034 1052 aa4.46□□□□□ -1.69
RTN4-208ENST00000404909 PTH1RQ03431 593 aa4.46□□□□□ -1.69
RTN4-208ENST00000404909 MCMDC2Q4G0Z9 681 aa4.46□□□□□ -1.69
RTN4-208ENST00000404909 PRPF40BQ6NWY9 871 aaKnown RBP4.46□□□□□ -1.69
RTN4-208ENST00000404909 SP8Q8IXZ3 490 aa4.46□□□□□ -1.69
RTN4-208ENST00000404909 POLLQ9UGP5 575 aa4.46□□□□□ -1.69
RTN4-208ENST00000404909 ATP6V0A2Q9Y487 856 aa4.46□□□□□ -1.69
RTN4-208ENST00000404909 ATP2B4P23634 1241 aa4.46□□□□□ -1.7
RTN4-208ENST00000404909 MAP3K12Q12852 859 aa4.46□□□□□ -1.7
RTN4-208ENST00000404909 DPP8Q6V1X1 898 aaPredicted RBP4.46□□□□□ -1.7
RTN4-208ENST00000404909 FBXO33Q7Z6M2 555 aa4.46□□□□□ -1.7
RTN4-208ENST00000404909 MPNDQ8N594 471 aa4.46□□□□□ -1.7
RTN4-208ENST00000404909 MAGEB6Q8N7X4 407 aa4.46□□□□□ -1.7
RTN4-208ENST00000404909 TBC1D16Q8TBP0 767 aa4.46□□□□□ -1.7
RTN4-208ENST00000404909 DDRGK1Q96HY6 314 aa4.46□□□□□ -1.7
RTN4-208ENST00000404909 MTFR1LQ9H019 292 aa4.46□□□□□ -1.7
RTN4-208ENST00000404909 LSG1Q9H089 658 aaKnown RBP4.46□□□□□ -1.7
RTN4-208ENST00000404909 RAI14Q9P0K7 980 aa4.46□□□□□ -1.7
RTN4-208ENST00000404909 TMC4Q7Z404 712 aa4.46□□□□□ -1.7
RTN4-208ENST00000404909 ZNF804AQ7Z570 1209 aa4.46□□□□□ -1.7
RTN4-208ENST00000404909 CNKSR1Q969H4 720 aa4.46□□□□□ -1.7
RTN4-208ENST00000404909 OSBP2Q969R2 916 aa4.46□□□□□ -1.7
RTN4-208ENST00000404909 DENND2AQ9ULE3 1009 aa4.46□□□□□ -1.7
RTN4-208ENST00000404909 PALD1Q9ULE6 856 aa4.46□□□□□ -1.7
RTN4-208ENST00000404909 CASZ1Q86V15 1759 aa4.46□□□□□ -1.7
RTN4-208ENST00000404909 CCDC171Q6TFL3 1326 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms