RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 CRYBG1Q9Y4K1 1723 aa14.04□□□□□ -0.16
RBM39-206ENST00000403542 N4BP2Q86UW6 1770 aaPredicted RBP14.03□□□□□ -0.16
RBM39-206ENST00000403542 IFIT1P09914 478 aaKnown RBP14.03□□□□□ -0.16
RBM39-206ENST00000403542 SNW1Q13573 536 aaKnown RBP14.03□□□□□ -0.16
RBM39-206ENST00000403542 TSGA10IPQ3SY00 556 aa14.03□□□□□ -0.16
RBM39-206ENST00000403542 GORABQ5T7V8 394 aa14.03□□□□□ -0.16
RBM39-206ENST00000403542 CCDC112Q8NEF3 446 aa14.03□□□□□ -0.16
RBM39-206ENST00000403542 M0R2C6 588 aa14.03□□□□□ -0.16
RBM39-206ENST00000403542 PFKFB2O60825 505 aa14.03□□□□□ -0.16
RBM39-206ENST00000403542 ILDR1Q86SU0 546 aaPredicted RBP14.03□□□□□ -0.16
RBM39-206ENST00000403542 PROSER2Q86WR7 435 aaPredicted RBP14.03□□□□□ -0.16
RBM39-206ENST00000403542 LRRC8AQ8IWT6 810 aa14.03□□□□□ -0.16
RBM39-206ENST00000403542 ZSCAN16Q9H4T2 348 aaPredicted RBP14.03□□□□□ -0.16
RBM39-206ENST00000403542 DENND2AQ9ULE3 1009 aa14.03□□□□□ -0.16
RBM39-206ENST00000403542 KDM6AO15550 1401 aaPredicted RBP14.03□□□□□ -0.16
RBM39-206ENST00000403542 CCDC69A6NI79 296 aa14.02□□□□□ -0.16
RBM39-206ENST00000403542 PDIA3P30101 505 aaKnown RBP14.02□□□□□ -0.16
RBM39-206ENST00000403542 RBM43Q6ZSC3 357 aaKnown RBP14.02□□□□□ -0.16
RBM39-206ENST00000403542 IFNL2Q8IZJ0 200 aa14.02□□□□□ -0.16
RBM39-206ENST00000403542 CLIC4Q9Y696 253 aa14.02□□□□□ -0.16
RBM39-206ENST00000403542 MAST3O60307 1309 aa14.02□□□□□ -0.17
RBM39-206ENST00000403542 STX1AQ16623 288 aa14.02□□□□□ -0.17
RBM39-206ENST00000403542 CEP135Q66GS9 1140 aa14.02□□□□□ -0.17
RBM39-206ENST00000403542 ATG9AQ7Z3C6 839 aa14.02□□□□□ -0.17
RBM39-206ENST00000403542 LRP10Q7Z4F1 713 aa14.02□□□□□ -0.17
RBM39-206ENST00000403542 SMAP1Q8IYB5 467 aaPredicted RBP14.02□□□□□ -0.17
RBM39-206ENST00000403542 PCDHA7Q9UN72 937 aa14.02□□□□□ -0.17
RBM39-206ENST00000403542 A0A1B0GUL7 405 aa14.01□□□□□ -0.17
RBM39-206ENST00000403542 NBPF26B4DH59 902 aa14.01□□□□□ -0.17
RBM39-206ENST00000403542 SMC2O95347 1197 aa14.01□□□□□ -0.17
RBM39-206ENST00000403542 ADORA1P30542 326 aa14.01□□□□□ -0.17
RBM39-206ENST00000403542 NDUFA8P51970 172 aa14.01□□□□□ -0.17
RBM39-206ENST00000403542 NBPF14Q5TI25 921 aa14.01□□□□□ -0.17
RBM39-206ENST00000403542 NBPF10Q6P3W6 841 aaKnown RBP14.01□□□□□ -0.17
RBM39-206ENST00000403542 NBPF15Q8N660 670 aa14.01□□□□□ -0.17
RBM39-206ENST00000403542 OSBP2Q969R2 916 aa14.01□□□□□ -0.17
RBM39-206ENST00000403542 MARCKSP29966 332 aaPredicted RBP14.01□□□□□ -0.17
RBM39-206ENST00000403542 DPCR1Q3MIW9 517 aa14.01□□□□□ -0.17
RBM39-206ENST00000403542 HSP90AA4PQ58FG1 418 aa14.01□□□□□ -0.17
RBM39-206ENST00000403542 DHX40Q8IX18 779 aaKnown RBP14.01□□□□□ -0.17
RBM39-206ENST00000403542 SMARCC2Q8TAQ2 1214 aa14.01□□□□□ -0.17
RBM39-206ENST00000403542 FDPSP14324 419 aaKnown RBP14.01□□□□□ -0.17
RBM39-206ENST00000403542 FOXO4P98177 505 aa14.01□□□□□ -0.17
RBM39-206ENST00000403542 ZRSR1Q15695 479 aaKnown RBP14.01□□□□□ -0.17
RBM39-206ENST00000403542 AIFM3Q96NN9 605 aa14.01□□□□□ -0.17
RBM39-206ENST00000403542 RCOR1Q9UKL0 485 aa14.01□□□□□ -0.17
RBM39-206ENST00000403542 STK38Q15208 465 aa14□□□□□ -0.17
RBM39-206ENST00000403542 ALDH8A1Q9H2A2 487 aaPredicted RBP14□□□□□ -0.17
RBM39-206ENST00000403542 FAM160A1Q05DH4 1040 aa14□□□□□ -0.17
RBM39-206ENST00000403542 SCARF1Q14162 830 aa14□□□□□ -0.17
RBM39-206ENST00000403542 KLF18A0A0U1RQI7 1052 aa13.99□□□□□ -0.17
RBM39-206ENST00000403542 GOLGA8BA8MQT2 603 aa13.99□□□□□ -0.17
RBM39-206ENST00000403542 RABL6Q3YEC7 729 aaPredicted RBP13.99□□□□□ -0.17
RBM39-206ENST00000403542 SYNE4Q8N205 404 aa13.99□□□□□ -0.17
RBM39-206ENST00000403542 ZNF215Q9UL58 517 aaPredicted RBP13.99□□□□□ -0.17
RBM39-206ENST00000403542 CTIFO43310 598 aaKnown RBP13.99□□□□□ -0.17
RBM39-206ENST00000403542 PTPN14Q15678 1187 aa13.99□□□□□ -0.17
RBM39-206ENST00000403542 ANKRD7Q92527 254 aa13.99□□□□□ -0.17
RBM39-206ENST00000403542 CARMIL3Q8ND23 1372 aa13.99□□□□□ -0.17
RBM39-206ENST00000403542 NCAPD2Q15021 1401 aa13.98□□□□□ -0.17
RBM39-206ENST00000403542 SMTNL1A8MU46 457 aa13.98□□□□□ -0.17
RBM39-206ENST00000403542 EXOSC10Q01780 885 aaKnown RBP13.98□□□□□ -0.17
RBM39-206ENST00000403542 GOLGA8FQ08AF8 430 aa13.98□□□□□ -0.17
RBM39-206ENST00000403542 GOLGA8DPQ0D2H9 430 aa13.98□□□□□ -0.17
RBM39-206ENST00000403542 ZNF396Q96N95 335 aaPredicted RBP13.98□□□□□ -0.17
RBM39-206ENST00000403542 MEGF6O75095 1541 aa13.98□□□□□ -0.17
RBM39-206ENST00000403542 JCADQ9P266 1359 aa13.98□□□□□ -0.17
RBM39-206ENST00000403542 CPLX1O14810 134 aa13.98□□□□□ -0.17
RBM39-206ENST00000403542 LMOD1P29536 600 aaPredicted RBP13.98□□□□□ -0.17
RBM39-206ENST00000403542 CASP7P55210 303 aa13.98□□□□□ -0.17
RBM39-206ENST00000403542 CEP57L1Q8IYX8 460 aa13.98□□□□□ -0.17
RBM39-206ENST00000403542 PLBD2Q8NHP8 589 aa13.98□□□□□ -0.17
RBM39-206ENST00000403542 NKX2-3Q8TAU0 364 aa13.98□□□□□ -0.17
RBM39-206ENST00000403542 C8orf76Q96K31 380 aa13.98□□□□□ -0.17
RBM39-206ENST00000403542 LMO7Q8WWI1 1683 aa13.98□□□□□ -0.17
RBM39-206ENST00000403542 RNF113AO15541 343 aaKnown RBP13.97□□□□□ -0.17
RBM39-206ENST00000403542 ZMYM1Q5SVZ6 1142 aa13.97□□□□□ -0.17
RBM39-206ENST00000403542 NAA16Q6N069 864 aaPredicted RBP13.97□□□□□ -0.17
RBM39-206ENST00000403542 TMC6Q7Z403 805 aa13.97□□□□□ -0.17
RBM39-206ENST00000403542 ENGASEQ8NFI3 743 aa13.97□□□□□ -0.17
RBM39-206ENST00000403542 MRPS27Q92552 414 aaKnown RBP13.97□□□□□ -0.17
RBM39-206ENST00000403542 FAM89AQ96GI7 184 aa13.97□□□□□ -0.17
RBM39-206ENST00000403542 ANO10Q9NW15 660 aa13.97□□□□□ -0.17
RBM39-206ENST00000403542 CWC25Q9NXE8 425 aaPredicted RBP13.97□□□□□ -0.17
RBM39-206ENST00000403542 IFNKQ9P0W0 207 aa13.97□□□□□ -0.17
RBM39-206ENST00000403542 ORC3Q9UBD5 711 aaPredicted RBP13.97□□□□□ -0.17
RBM39-206ENST00000403542 UBE2Q2LH0YL09 131 aa13.97□□□□□ -0.17
RBM39-206ENST00000403542 HMGB1P09429 215 aaKnown RBP13.97□□□□□ -0.17
RBM39-206ENST00000403542 PDIA4P13667 645 aaKnown RBP13.97□□□□□ -0.17
RBM39-206ENST00000403542 PUS7LQ9H0K6 701 aaKnown RBP13.97□□□□□ -0.17
RBM39-206ENST00000403542 INCENPQ9NQS7 918 aa13.97□□□□□ -0.17
RBM39-206ENST00000403542 ADGRL3Q9HAR2 1447 aa13.97□□□□□ -0.17
RBM39-206ENST00000403542 KIF28PB7ZC32 967 aa13.97□□□□□ -0.17
RBM39-206ENST00000403542 PRC1O43663 620 aa13.97□□□□□ -0.17
RBM39-206ENST00000403542 FGAP02671 866 aa13.97□□□□□ -0.17
RBM39-206ENST00000403542 APPP05067 770 aa13.97□□□□□ -0.17
RBM39-206ENST00000403542 DMTNQ08495 405 aa13.97□□□□□ -0.17
RBM39-206ENST00000403542 TAF7LQ5H9L4 462 aa13.97□□□□□ -0.17
RBM39-206ENST00000403542 TTC39AQ5SRH9 613 aa13.97□□□□□ -0.17
RBM39-206ENST00000403542 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms