RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 PFKFB2O60825 505 aa20.05■□□□□ 0.8
DNMT3A-205ENST00000402667 WASHC4Q2M389 1173 aa20.05■□□□□ 0.8
DNMT3A-205ENST00000402667 TTLL5Q6EMB2 1281 aa20.05■□□□□ 0.8
DNMT3A-205ENST00000402667 AGXT2Q9BYV1 514 aa20.05■□□□□ 0.8
DNMT3A-205ENST00000402667 HS1BP3Q53T59 392 aa20.05■□□□□ 0.8
DNMT3A-205ENST00000402667 PI16Q6UXB8 463 aa20.05■□□□□ 0.8
DNMT3A-205ENST00000402667 ZSCAN30Q86W11 494 aa20.05■□□□□ 0.8
DNMT3A-205ENST00000402667 CNNM1Q9NRU3 951 aa20.05■□□□□ 0.8
DNMT3A-205ENST00000402667 ABCC12Q96J65 1359 aa20.05■□□□□ 0.8
DNMT3A-205ENST00000402667 ANKRD36CQ5JPF3 1778 aa20.04■□□□□ 0.8
DNMT3A-205ENST00000402667 COL22A1Q8NFW1 1626 aaPredicted RBP20.04■□□□□ 0.8
DNMT3A-205ENST00000402667 ELP1O95163 1332 aa20.04■□□□□ 0.8
DNMT3A-205ENST00000402667 NUP98P52948 1817 aa20.04■□□□□ 0.8
DNMT3A-205ENST00000402667 PDE8AO60658 829 aa20.04■□□□□ 0.8
DNMT3A-205ENST00000402667 APOBRQ0VD83 1088 aa20.04■□□□□ 0.8
DNMT3A-205ENST00000402667 SMARCC2Q8TAQ2 1214 aa20.04■□□□□ 0.8
DNMT3A-205ENST00000402667 DDX11Q96FC9 970 aa20.04■□□□□ 0.8
DNMT3A-205ENST00000402667 LLPHQ9BRT6 129 aaKnown RBP20.04■□□□□ 0.8
DNMT3A-205ENST00000402667 FOXP2O15409 715 aa20.03■□□□□ 0.8
DNMT3A-205ENST00000402667 ZNF34Q8IZ26 560 aa20.03■□□□□ 0.8
DNMT3A-205ENST00000402667 FAM184AQ8NB25 1140 aa20.03■□□□□ 0.8
DNMT3A-205ENST00000402667 UBN2Q6ZU65 1347 aa20.03■□□□□ 0.8
DNMT3A-205ENST00000402667 AHDC1Q5TGY3 1603 aaPredicted RBP20.03■□□□□ 0.8
DNMT3A-205ENST00000402667 VGLL2Q8N8G2 317 aa20.03■□□□□ 0.8
DNMT3A-205ENST00000402667 APPBP2Q92624 585 aa20.03■□□□□ 0.8
DNMT3A-205ENST00000402667 MCAMP43121 646 aa20.02■□□□□ 0.8
DNMT3A-205ENST00000402667 SCAND2PQ9GZW5 306 aaPredicted RBP20.02■□□□□ 0.8
DNMT3A-205ENST00000402667 PUS7LQ9H0K6 701 aaKnown RBP20.02■□□□□ 0.8
DNMT3A-205ENST00000402667 TFIP11Q9UBB9 837 aaKnown RBP20.02■□□□□ 0.8
DNMT3A-205ENST00000402667 CTNNA3Q9UI47 895 aa20.02■□□□□ 0.8
DNMT3A-205ENST00000402667 MYH3P11055 1940 aa20.02■□□□□ 0.8
DNMT3A-205ENST00000402667 NSUN7Q8NE18 718 aaKnown RBP20.02■□□□□ 0.79
DNMT3A-205ENST00000402667 CTDNEP1O95476 244 aa20.01■□□□□ 0.79
DNMT3A-205ENST00000402667 GIMAP6Q6P9H5 292 aa20.01■□□□□ 0.79
DNMT3A-205ENST00000402667 CHST3Q7LGC8 479 aa20.01■□□□□ 0.79
DNMT3A-205ENST00000402667 KLHL34Q8N239 644 aa20.01■□□□□ 0.79
DNMT3A-205ENST00000402667 ZNF512BQ96KM6 892 aaPredicted RBP20.01■□□□□ 0.79
DNMT3A-205ENST00000402667 CDCA7Q9BWT1 371 aaPredicted RBP20.01■□□□□ 0.79
DNMT3A-205ENST00000402667 PDE8BO95263 885 aa20.01■□□□□ 0.79
DNMT3A-205ENST00000402667 FGAP02671 866 aa20.01■□□□□ 0.79
DNMT3A-205ENST00000402667 EIF5P55010 431 aaKnown RBP20.01■□□□□ 0.79
DNMT3A-205ENST00000402667 RESTQ13127 1097 aa20.01■□□□□ 0.79
DNMT3A-205ENST00000402667 UVSSAQ2YD98 709 aa20.01■□□□□ 0.79
DNMT3A-205ENST00000402667 WNK3Q9BYP7 1800 aa20■□□□□ 0.79
DNMT3A-205ENST00000402667 H3BQV1 296 aa20■□□□□ 0.79
DNMT3A-205ENST00000402667 ADAMTS2O95450 1211 aa20■□□□□ 0.79
DNMT3A-205ENST00000402667 IFFO2Q5TF58 517 aa20■□□□□ 0.79
DNMT3A-205ENST00000402667 SPATA32Q96LK8 384 aa20■□□□□ 0.79
DNMT3A-205ENST00000402667 FUCA2Q9BTY2 467 aa20■□□□□ 0.79
DNMT3A-205ENST00000402667 SPATA31A1Q5TZJ5 1347 aa20■□□□□ 0.79
DNMT3A-205ENST00000402667 DOT1LQ8TEK3 1739 aa20■□□□□ 0.79
DNMT3A-205ENST00000402667 CCT2P78371 535 aaKnown RBP19.99■□□□□ 0.79
DNMT3A-205ENST00000402667 DDB1Q16531 1140 aa19.99■□□□□ 0.79
DNMT3A-205ENST00000402667 IMMTQ16891 758 aaKnown RBP19.99■□□□□ 0.79
DNMT3A-205ENST00000402667 INTS5Q6P9B9 1019 aaKnown RBP19.99■□□□□ 0.79
DNMT3A-205ENST00000402667 LEO1Q8WVC0 666 aaPredicted RBP19.99■□□□□ 0.79
DNMT3A-205ENST00000402667 ZNF274Q96GC6 653 aaPredicted RBP19.99■□□□□ 0.79
DNMT3A-205ENST00000402667 AKAP11Q9UKA4 1901 aa19.99■□□□□ 0.79
DNMT3A-205ENST00000402667 HCLS1P14317 486 aaPredicted RBP19.99■□□□□ 0.79
DNMT3A-205ENST00000402667 PDIA3P30101 505 aaKnown RBP19.99■□□□□ 0.79
DNMT3A-205ENST00000402667 HAND2P61296 217 aa19.99■□□□□ 0.79
DNMT3A-205ENST00000402667 FBXL16Q8N461 479 aa19.99■□□□□ 0.79
DNMT3A-205ENST00000402667 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.99■□□□□ 0.79
DNMT3A-205ENST00000402667 PTPDC1A2A3K4 754 aa19.98■□□□□ 0.79
DNMT3A-205ENST00000402667 GPAA1O43292 621 aa19.98■□□□□ 0.79
DNMT3A-205ENST00000402667 NOL7Q9UMY1 257 aaKnown RBP19.98■□□□□ 0.79
DNMT3A-205ENST00000402667 NWD2Q9ULI1 1742 aa19.98■□□□□ 0.79
DNMT3A-205ENST00000402667 A0A0G2JS52 829 aa19.98■□□□□ 0.79
DNMT3A-205ENST00000402667 LIG1P18858 919 aa19.98■□□□□ 0.79
DNMT3A-205ENST00000402667 MSNP26038 577 aaKnown RBP19.98■□□□□ 0.79
DNMT3A-205ENST00000402667 HMGN5P82970 282 aaKnown RBP19.98■□□□□ 0.79
DNMT3A-205ENST00000402667 ZSCAN16Q9H4T2 348 aaPredicted RBP19.98■□□□□ 0.79
DNMT3A-205ENST00000402667 NCOA5Q9HCD5 579 aaKnown RBP19.98■□□□□ 0.79
DNMT3A-205ENST00000402667 THRAP3Q9Y2W1 955 aaKnown RBP19.98■□□□□ 0.79
DNMT3A-205ENST00000402667 ADD2P35612 726 aa19.97■□□□□ 0.79
DNMT3A-205ENST00000402667 SUSD4Q5VX71 490 aa19.97■□□□□ 0.79
DNMT3A-205ENST00000402667 ACSBG1Q96GR2 724 aa19.97■□□□□ 0.79
DNMT3A-205ENST00000402667 CCDC87Q9NVE4 849 aa19.97■□□□□ 0.79
DNMT3A-205ENST00000402667 NAP1L2Q9ULW6 460 aaPredicted RBP19.97■□□□□ 0.79
DNMT3A-205ENST00000402667 SLIT2O94813 1529 aa19.97■□□□□ 0.79
DNMT3A-205ENST00000402667 ATP6V1AP38606 617 aa19.97■□□□□ 0.79
DNMT3A-205ENST00000402667 ZSCAN25Q6NSZ9 544 aa19.97■□□□□ 0.79
DNMT3A-205ENST00000402667 AK7Q96M32 723 aa19.97■□□□□ 0.79
DNMT3A-205ENST00000402667 MYH7P12883 1935 aa19.97■□□□□ 0.79
DNMT3A-205ENST00000402667 PHKA1P46020 1223 aa19.96■□□□□ 0.79
DNMT3A-205ENST00000402667 CRKLP46109 303 aaKnown RBP19.96■□□□□ 0.79
DNMT3A-205ENST00000402667 EVCP57679 992 aa19.96■□□□□ 0.79
DNMT3A-205ENST00000402667 TTF1Q15361 905 aaPredicted RBP19.96■□□□□ 0.79
DNMT3A-205ENST00000402667 SLC9C2Q5TAH2 1124 aa19.96■□□□□ 0.79
DNMT3A-205ENST00000402667 CCDC102BQ68D86 513 aa19.96■□□□□ 0.79
DNMT3A-205ENST00000402667 NAA16Q6N069 864 aaPredicted RBP19.96■□□□□ 0.79
DNMT3A-205ENST00000402667 PIH1D3Q9NQM4 214 aaKnown RBP19.96■□□□□ 0.79
DNMT3A-205ENST00000402667 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.96■□□□□ 0.79
DNMT3A-205ENST00000402667 GOLGA6L4A6NEF3 574 aa19.96■□□□□ 0.79
DNMT3A-205ENST00000402667 MARCH10Q8NA82 808 aaPredicted RBP19.96■□□□□ 0.79
DNMT3A-205ENST00000402667 GPHNQ9NQX3 736 aaPredicted RBP19.96■□□□□ 0.79
DNMT3A-205ENST00000402667 SALL1Q9NSC2 1324 aa19.95■□□□□ 0.78
DNMT3A-205ENST00000402667 HELBQ8NG08 1087 aaPredicted RBP19.95■□□□□ 0.78
DNMT3A-205ENST00000402667 CCDC39Q9UFE4 941 aa19.95■□□□□ 0.78
DNMT3A-205ENST00000402667 KIF3AQ9Y496 699 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms