RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 RPGRQ92834 1020 aaKnown RBP19.06■□□□□ 0.64
CHRFAM7A-203ENST00000401522 LSG1Q9H089 658 aaKnown RBP19.06■□□□□ 0.64
CHRFAM7A-203ENST00000401522 WDR33Q9C0J8 1336 aaKnown RBP19.06■□□□□ 0.64
CHRFAM7A-203ENST00000401522 OS9Q13438 667 aaPredicted RBP19.06■□□□□ 0.64
CHRFAM7A-203ENST00000401522 KIAA1211Q6ZU35 1233 aa19.06■□□□□ 0.64
CHRFAM7A-203ENST00000401522 ERC1Q8IUD2 1116 aa19.06■□□□□ 0.64
CHRFAM7A-203ENST00000401522 ZNF594Q96JF6 807 aaPredicted RBP19.06■□□□□ 0.64
CHRFAM7A-203ENST00000401522 CDC5LQ99459 802 aaKnown RBP19.06■□□□□ 0.64
CHRFAM7A-203ENST00000401522 FBXO3Q9UK99 471 aa19.06■□□□□ 0.64
CHRFAM7A-203ENST00000401522 PA2G4Q9UQ80 394 aaKnown RBP19.06■□□□□ 0.64
CHRFAM7A-203ENST00000401522 H0YIN7 160 aa19.05■□□□□ 0.64
CHRFAM7A-203ENST00000401522 MAP4K4O95819 1239 aaPredicted RBP19.05■□□□□ 0.64
CHRFAM7A-203ENST00000401522 NPR1P16066 1061 aa19.05■□□□□ 0.64
CHRFAM7A-203ENST00000401522 HS1BP3Q53T59 392 aa19.05■□□□□ 0.64
CHRFAM7A-203ENST00000401522 LRSAM1Q6UWE0 723 aa19.05■□□□□ 0.64
CHRFAM7A-203ENST00000401522 NOL8Q76FK4 1167 aaKnown RBP19.05■□□□□ 0.64
CHRFAM7A-203ENST00000401522 RBM17Q96I25 401 aaKnown RBP19.05■□□□□ 0.64
CHRFAM7A-203ENST00000401522 GPATCH3Q96I76 525 aa19.05■□□□□ 0.64
CHRFAM7A-203ENST00000401522 CRAMP1Q96RY5 1269 aa19.05■□□□□ 0.64
CHRFAM7A-203ENST00000401522 RBSNQ9H1K0 784 aa19.05■□□□□ 0.64
CHRFAM7A-203ENST00000401522 RBM27Q9P2N5 1060 aaKnown RBP19.05■□□□□ 0.64
CHRFAM7A-203ENST00000401522 FOXD4L5Q5VV16 416 aaPredicted RBP19.04■□□□□ 0.64
CHRFAM7A-203ENST00000401522 C2CD5Q86YS7 1000 aa19.04■□□□□ 0.64
CHRFAM7A-203ENST00000401522 CLASRPQ8N2M8 674 aaKnown RBP19.04■□□□□ 0.64
CHRFAM7A-203ENST00000401522 RUFY2Q8WXA3 655 aa19.04■□□□□ 0.64
CHRFAM7A-203ENST00000401522 FOXD4L4Q8WXT5 416 aaPredicted RBP19.04■□□□□ 0.64
CHRFAM7A-203ENST00000401522 MASTLQ96GX5 879 aa19.04■□□□□ 0.64
CHRFAM7A-203ENST00000401522 TMEM63CQ9P1W3 806 aa19.04■□□□□ 0.64
CHRFAM7A-203ENST00000401522 CD2APQ9Y5K6 639 aa19.04■□□□□ 0.64
CHRFAM7A-203ENST00000401522 SNX14Q9Y5W7 946 aa19.04■□□□□ 0.64
CHRFAM7A-203ENST00000401522 RPS8P62241 208 aaKnown RBP19.04■□□□□ 0.64
CHRFAM7A-203ENST00000401522 TAF7LQ5H9L4 462 aa19.04■□□□□ 0.64
CHRFAM7A-203ENST00000401522 NAP1L5Q96NT1 182 aaPredicted RBP19.04■□□□□ 0.64
CHRFAM7A-203ENST00000401522 CIAO1O76071 339 aa19.03■□□□□ 0.64
CHRFAM7A-203ENST00000401522 TGFB2P61812 414 aa19.03■□□□□ 0.64
CHRFAM7A-203ENST00000401522 GRAPQ13588 217 aa19.03■□□□□ 0.64
CHRFAM7A-203ENST00000401522 LDHAL6AQ6ZMR3 332 aa19.03■□□□□ 0.64
CHRFAM7A-203ENST00000401522 ZSCAN30Q86W11 494 aa19.03■□□□□ 0.64
CHRFAM7A-203ENST00000401522 ANKRD18AQ8IVF6 992 aa19.03■□□□□ 0.64
CHRFAM7A-203ENST00000401522 GRAPLQ8TC17 118 aaPredicted RBP19.03■□□□□ 0.64
CHRFAM7A-203ENST00000401522 CELF1Q92879 486 aaKnown RBP19.03■□□□□ 0.64
CHRFAM7A-203ENST00000401522 SYAP1Q96A49 352 aaPredicted RBP19.03■□□□□ 0.64
CHRFAM7A-203ENST00000401522 TTC14Q96N46 770 aa19.03■□□□□ 0.64
CHRFAM7A-203ENST00000401522 EYA2O00167 538 aa19.02■□□□□ 0.64
CHRFAM7A-203ENST00000401522 ALDH1B1P30837 517 aa19.02■□□□□ 0.64
CHRFAM7A-203ENST00000401522 IGHMBP2P38935 993 aaKnown RBP19.02■□□□□ 0.64
CHRFAM7A-203ENST00000401522 STYK1Q6J9G0 422 aa19.02■□□□□ 0.64
CHRFAM7A-203ENST00000401522 SIL1Q9H173 461 aa19.02■□□□□ 0.64
CHRFAM7A-203ENST00000401522 DIAPH3Q9NSV4 1193 aa19.02■□□□□ 0.64
CHRFAM7A-203ENST00000401522 ECHDC1Q9NTX5 307 aa19.02■□□□□ 0.64
CHRFAM7A-203ENST00000401522 COL11A2P13942 1736 aaPredicted RBP19.02■□□□□ 0.64
CHRFAM7A-203ENST00000401522 CHRNA5P30532 468 aa19.02■□□□□ 0.63
CHRFAM7A-203ENST00000401522 G3BP1Q13283 466 aaKnown RBP eCLIP19.02■□□□□ 0.63
CHRFAM7A-203ENST00000401522 ATG9AQ7Z3C6 839 aa19.02■□□□□ 0.63
CHRFAM7A-203ENST00000401522 CHAMP1Q96JM3 812 aa19.02■□□□□ 0.63
CHRFAM7A-203ENST00000401522 MPHOSPH8Q99549 860 aa19.02■□□□□ 0.63
CHRFAM7A-203ENST00000401522 BSDC1Q9NW68 430 aaPredicted RBP19.02■□□□□ 0.63
CHRFAM7A-203ENST00000401522 COL4A1P02462 1669 aa19.01■□□□□ 0.63
CHRFAM7A-203ENST00000401522 TAF1P21675 1872 aa19.01■□□□□ 0.63
CHRFAM7A-203ENST00000401522 BBOX1O75936 387 aa19.01■□□□□ 0.63
CHRFAM7A-203ENST00000401522 PDLIM2Q96JY6 352 aa19.01■□□□□ 0.63
CHRFAM7A-203ENST00000401522 PUS3Q9BZE2 481 aaKnown RBP19.01■□□□□ 0.63
CHRFAM7A-203ENST00000401522 RIPOR2Q9Y4F9 1068 aa19.01■□□□□ 0.63
CHRFAM7A-203ENST00000401522 IL15P40933 162 aaPredicted RBP19■□□□□ 0.63
CHRFAM7A-203ENST00000401522 LRRC24Q50LG9 513 aa19■□□□□ 0.63
CHRFAM7A-203ENST00000401522 CWC27Q6UX04 472 aaKnown RBP19■□□□□ 0.63
CHRFAM7A-203ENST00000401522 LIMCH1Q9UPQ0 1083 aa19■□□□□ 0.63
CHRFAM7A-203ENST00000401522 LRP5O75197 1615 aa19■□□□□ 0.63
CHRFAM7A-203ENST00000401522 SYCE3A1L190 88 aa19■□□□□ 0.63
CHRFAM7A-203ENST00000401522 IFIT2P09913 472 aaKnown RBP19■□□□□ 0.63
CHRFAM7A-203ENST00000401522 CNNM1Q9NRU3 951 aa19■□□□□ 0.63
CHRFAM7A-203ENST00000401522 NSFL1CQ9UNZ2 370 aaKnown RBP19■□□□□ 0.63
CHRFAM7A-203ENST00000401522 SASH1O94885 1247 aa18.99■□□□□ 0.63
CHRFAM7A-203ENST00000401522 KCNA3P22001 575 aa18.99■□□□□ 0.63
CHRFAM7A-203ENST00000401522 TMEM87AQ8NBN3 555 aa18.99■□□□□ 0.63
CHRFAM7A-203ENST00000401522 ZNF622Q969S3 477 aaKnown RBP eCLIP18.99■□□□□ 0.63
CHRFAM7A-203ENST00000401522 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.99■□□□□ 0.63
CHRFAM7A-203ENST00000401522 RPAP1Q9BWH6 1393 aaPredicted RBP18.98■□□□□ 0.63
CHRFAM7A-203ENST00000401522 A0A0G2JLW4 131 aa18.98■□□□□ 0.63
CHRFAM7A-203ENST00000401522 DPEP1P16444 411 aa18.98■□□□□ 0.63
CHRFAM7A-203ENST00000401522 RASEFQ8IZ41 740 aa18.98■□□□□ 0.63
CHRFAM7A-203ENST00000401522 CNKSR1Q969H4 720 aa18.98■□□□□ 0.63
CHRFAM7A-203ENST00000401522 EVI5LQ96CN4 794 aa18.98■□□□□ 0.63
CHRFAM7A-203ENST00000401522 PPP1R1BQ9UD71 204 aaPredicted RBP18.98■□□□□ 0.63
CHRFAM7A-203ENST00000401522 DLEC1Q9Y238 1755 aa18.98■□□□□ 0.63
CHRFAM7A-203ENST00000401522 AK2P54819 239 aa18.98■□□□□ 0.63
CHRFAM7A-203ENST00000401522 TMC4Q7Z404 712 aa18.98■□□□□ 0.63
CHRFAM7A-203ENST00000401522 KCNB2Q92953 911 aa18.98■□□□□ 0.63
CHRFAM7A-203ENST00000401522 KIAA1551Q9HCM1 1747 aa18.98■□□□□ 0.63
CHRFAM7A-203ENST00000401522 MROH5Q6ZUA9 1318 aa18.97■□□□□ 0.63
CHRFAM7A-203ENST00000401522 RUFY3Q7L099 469 aa18.97■□□□□ 0.63
CHRFAM7A-203ENST00000401522 TM6SF1Q9BZW5 370 aa18.97■□□□□ 0.63
CHRFAM7A-203ENST00000401522 HIP1O00291 1037 aa18.96■□□□□ 0.63
CHRFAM7A-203ENST00000401522 MSNP26038 577 aaKnown RBP18.96■□□□□ 0.63
CHRFAM7A-203ENST00000401522 MINPP1Q9UNW1 487 aa18.96■□□□□ 0.63
CHRFAM7A-203ENST00000401522 SPEF2Q9C093 1822 aa18.96■□□□□ 0.63
CHRFAM7A-203ENST00000401522 TSPY26PQ9H489 355 aa18.96■□□□□ 0.63
CHRFAM7A-203ENST00000401522 ZSCAN22P10073 491 aaPredicted RBP18.95■□□□□ 0.62
CHRFAM7A-203ENST00000401522 TFCP2Q12800 502 aa18.95■□□□□ 0.62
CHRFAM7A-203ENST00000401522 VPS53Q5VIR6 699 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms