RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 TTLL11Q8NHH1 800 aa18.77■□□□□ 0.6
VAMP1-203ENST00000400911 ZNF296Q8WUU4 475 aaPredicted RBP18.77■□□□□ 0.6
VAMP1-203ENST00000400911 FBXW7Q969H0 707 aa18.77■□□□□ 0.6
VAMP1-203ENST00000400911 GREM2Q9H772 168 aa18.77■□□□□ 0.6
VAMP1-203ENST00000400911 WNT10BO00744 389 aa18.76■□□□□ 0.59
VAMP1-203ENST00000400911 MKRN3Q13064 507 aaKnown RBP18.76■□□□□ 0.59
VAMP1-203ENST00000400911 HDAC9Q9UKV0 1011 aa18.76■□□□□ 0.59
VAMP1-203ENST00000400911 SCN9AQ15858 1988 aa18.75■□□□□ 0.59
VAMP1-203ENST00000400911 PI4KAP2A4QPH2 592 aa18.75■□□□□ 0.59
VAMP1-203ENST00000400911 CCT4P50991 539 aaKnown RBP18.75■□□□□ 0.59
VAMP1-203ENST00000400911 KSR2Q6VAB6 950 aa18.75■□□□□ 0.59
VAMP1-203ENST00000400911 TXNRD3Q86VQ6 643 aa18.75■□□□□ 0.59
VAMP1-203ENST00000400911 TSPYL6Q8N831 410 aa18.75■□□□□ 0.59
VAMP1-203ENST00000400911 PI4KAP1Q8N8J0 262 aa18.75■□□□□ 0.59
VAMP1-203ENST00000400911 PCDH10Q9P2E7 1040 aa18.75■□□□□ 0.59
VAMP1-203ENST00000400911 MED23Q9ULK4 1368 aa18.75■□□□□ 0.59
VAMP1-203ENST00000400911 TM4SF4P48230 202 aa18.74■□□□□ 0.59
VAMP1-203ENST00000400911 PKN2Q16513 984 aaKnown RBP18.74■□□□□ 0.59
VAMP1-203ENST00000400911 STRIP1Q5VSL9 837 aa18.74■□□□□ 0.59
VAMP1-203ENST00000400911 SASH1O94885 1247 aa18.73■□□□□ 0.59
VAMP1-203ENST00000400911 CWF19L2Q2TBE0 894 aaKnown RBP18.73■□□□□ 0.59
VAMP1-203ENST00000400911 CHMP4AQ9BY43 222 aa18.73■□□□□ 0.59
VAMP1-203ENST00000400911 COA1Q9GZY4 146 aa18.73■□□□□ 0.59
VAMP1-203ENST00000400911 GPR25O00155 361 aa18.72■□□□□ 0.59
VAMP1-203ENST00000400911 NF2P35240 595 aa18.72■□□□□ 0.59
VAMP1-203ENST00000400911 PTPN12Q05209 780 aaKnown RBP18.72■□□□□ 0.59
VAMP1-203ENST00000400911 PRKG1Q13976 671 aa18.72■□□□□ 0.59
VAMP1-203ENST00000400911 TTLL5Q6EMB2 1281 aa18.72■□□□□ 0.59
VAMP1-203ENST00000400911 MYO3BQ8WXR4 1341 aa18.72■□□□□ 0.59
VAMP1-203ENST00000400911 POLR2AP24928 1970 aaKnown RBP18.72■□□□□ 0.59
VAMP1-203ENST00000400911 KLRK1P26718 216 aa18.71■□□□□ 0.59
VAMP1-203ENST00000400911 NEXNQ0ZGT2 675 aa18.71■□□□□ 0.59
VAMP1-203ENST00000400911 PRKRIP1Q9H875 184 aaPredicted RBP18.71■□□□□ 0.59
VAMP1-203ENST00000400911 LEMD3Q9Y2U8 911 aa18.71■□□□□ 0.59
VAMP1-203ENST00000400911 PAPPA2Q9BXP8 1791 aa18.7■□□□□ 0.58
VAMP1-203ENST00000400911 NEURL1BA8MQ27 555 aa18.7■□□□□ 0.58
VAMP1-203ENST00000400911 IGHMBP2P38935 993 aaKnown RBP18.7■□□□□ 0.58
VAMP1-203ENST00000400911 ARMC9Q7Z3E5 817 aa18.7■□□□□ 0.58
VAMP1-203ENST00000400911 UBE3BQ7Z3V4 1068 aa18.7■□□□□ 0.58
VAMP1-203ENST00000400911 KIAA0825Q8IV33 1275 aa18.7■□□□□ 0.58
VAMP1-203ENST00000400911 R3HDMLQ9H3Y0 253 aa18.7■□□□□ 0.58
VAMP1-203ENST00000400911 ZNF804BA4D1E1 1349 aa18.7■□□□□ 0.58
VAMP1-203ENST00000400911 H7C1W4 665 aa18.69■□□□□ 0.58
VAMP1-203ENST00000400911 SREBF2Q12772 1141 aa18.69■□□□□ 0.58
VAMP1-203ENST00000400911 NOM1Q5C9Z4 860 aaKnown RBP18.69■□□□□ 0.58
VAMP1-203ENST00000400911 PRPF38BQ5VTL8 546 aaKnown RBP18.69■□□□□ 0.58
VAMP1-203ENST00000400911 TSR2Q969E8 191 aaKnown RBP18.69■□□□□ 0.58
VAMP1-203ENST00000400911 ITGA6P23229 1130 aa18.68■□□□□ 0.58
VAMP1-203ENST00000400911 MMP14P50281 582 aa18.68■□□□□ 0.58
VAMP1-203ENST00000400911 GTF2IP78347 998 aa18.68■□□□□ 0.58
VAMP1-203ENST00000400911 G2E3Q7L622 706 aa18.68■□□□□ 0.58
VAMP1-203ENST00000400911 APOBEC3FQ8IUX4 373 aaKnown RBP18.68■□□□□ 0.58
VAMP1-203ENST00000400911 STK31Q9BXU1 1019 aa18.68■□□□□ 0.58
VAMP1-203ENST00000400911 ANKRD2Q9GZV1 360 aa18.68■□□□□ 0.58
VAMP1-203ENST00000400911 FZD1Q9UP38 647 aa18.68■□□□□ 0.58
VAMP1-203ENST00000400911 LDLRAD1Q5T700 205 aa18.67■□□□□ 0.58
VAMP1-203ENST00000400911 FBXO46Q6PJ61 603 aaPredicted RBP18.67■□□□□ 0.58
VAMP1-203ENST00000400911 ZBED3Q96IU2 234 aaPredicted RBP18.67■□□□□ 0.58
VAMP1-203ENST00000400911 MPHOSPH8Q99549 860 aa18.67■□□□□ 0.58
VAMP1-203ENST00000400911 FKTNO75072 461 aa18.66■□□□□ 0.58
VAMP1-203ENST00000400911 SLC4A2P04920 1241 aa18.66■□□□□ 0.58
VAMP1-203ENST00000400911 SPRYD7Q5W111 196 aa18.66■□□□□ 0.58
VAMP1-203ENST00000400911 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.66■□□□□ 0.58
VAMP1-203ENST00000400911 ANGEL1Q9UNK9 670 aaKnown RBP18.66■□□□□ 0.58
VAMP1-203ENST00000400911 KCNJ4P48050 445 aa18.65■□□□□ 0.58
VAMP1-203ENST00000400911 GCKRQ14397 625 aa18.65■□□□□ 0.58
VAMP1-203ENST00000400911 PLA2G12BQ9BX93 195 aa18.65■□□□□ 0.58
VAMP1-203ENST00000400911 CFHR5Q9BXR6 569 aa18.65■□□□□ 0.58
VAMP1-203ENST00000400911 DEFB129Q9H1M3 183 aa18.65■□□□□ 0.58
VAMP1-203ENST00000400911 SNAP23O00161 211 aa18.64■□□□□ 0.57
VAMP1-203ENST00000400911 CSF1RP07333 972 aa18.64■□□□□ 0.57
VAMP1-203ENST00000400911 CASP7P55210 303 aa18.64■□□□□ 0.57
VAMP1-203ENST00000400911 CHRNDQ07001 517 aa18.64■□□□□ 0.57
VAMP1-203ENST00000400911 DLGAP5Q15398 846 aa18.64■□□□□ 0.57
VAMP1-203ENST00000400911 TWISTNBQ3B726 338 aaPredicted RBP18.64■□□□□ 0.57
VAMP1-203ENST00000400911 SLC10A4Q96EP9 437 aa18.64■□□□□ 0.57
VAMP1-203ENST00000400911 CD209Q9NNX6 404 aa18.64■□□□□ 0.57
VAMP1-203ENST00000400911 CERS5Q8N5B7 392 aa18.63■□□□□ 0.57
VAMP1-203ENST00000400911 PCDHAC2Q9Y5I4 1007 aa18.63■□□□□ 0.57
VAMP1-203ENST00000400911 MKI67P46013 3256 aaKnown RBP18.62■□□□□ 0.57
VAMP1-203ENST00000400911 TAF5LO75529 589 aa18.62■□□□□ 0.57
VAMP1-203ENST00000400911 ALDH1A1P00352 501 aa18.62■□□□□ 0.57
VAMP1-203ENST00000400911 AKAP11Q9UKA4 1901 aa18.62■□□□□ 0.57
VAMP1-203ENST00000400911 F8W031 263 aaPredicted RBP18.61■□□□□ 0.57
VAMP1-203ENST00000400911 INHBEP58166 350 aa18.61■□□□□ 0.57
VAMP1-203ENST00000400911 FLIIQ13045 1269 aa18.61■□□□□ 0.57
VAMP1-203ENST00000400911 IFNL1Q8IU54 200 aa18.61■□□□□ 0.57
VAMP1-203ENST00000400911 HELBQ8NG08 1087 aaPredicted RBP18.61■□□□□ 0.57
VAMP1-203ENST00000400911 CLMNQ96JQ2 1002 aa18.61■□□□□ 0.57
VAMP1-203ENST00000400911 HTTP42858 3142 aa18.61■□□□□ 0.57
VAMP1-203ENST00000400911 ANKRD18BA2A2Z9 1011 aa18.6■□□□□ 0.57
VAMP1-203ENST00000400911 MANSC4A6NHS7 340 aaPredicted RBP18.6■□□□□ 0.57
VAMP1-203ENST00000400911 PPP1R12BO60237 982 aaPredicted RBP18.6■□□□□ 0.57
VAMP1-203ENST00000400911 MAP3K11Q16584 847 aa18.6■□□□□ 0.57
VAMP1-203ENST00000400911 WWC1Q8IX03 1113 aa18.6■□□□□ 0.57
VAMP1-203ENST00000400911 MTMR14Q8NCE2 650 aa18.6■□□□□ 0.57
VAMP1-203ENST00000400911 MYH16Q9H6N6 1097 aa18.6■□□□□ 0.57
VAMP1-203ENST00000400911 IRS2Q9Y4H2 1338 aa18.59■□□□□ 0.57
VAMP1-203ENST00000400911 CLRN2A0PK11 232 aa18.59■□□□□ 0.57
VAMP1-203ENST00000400911 FKBP5Q13451 457 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms