RNA–Protein interactions for RNA: ENST00000400122.7

SMARCE1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-204ENST00000400122 FOXO4P98177 505 aa18.41■□□□□ 0.54
SMARCE1-204ENST00000400122 ZNF804BA4D1E1 1349 aa18.41■□□□□ 0.54
SMARCE1-204ENST00000400122 E9PSI1 815 aa18.4■□□□□ 0.54
SMARCE1-204ENST00000400122 GRM8O00222 908 aa18.4■□□□□ 0.54
SMARCE1-204ENST00000400122 EGFRP00533 1210 aa18.4■□□□□ 0.54
SMARCE1-204ENST00000400122 BRPF1P55201 1214 aaPredicted RBP18.4■□□□□ 0.54
SMARCE1-204ENST00000400122 FKBP1BP68106 108 aa18.4■□□□□ 0.54
SMARCE1-204ENST00000400122 NOGQ13253 232 aa18.4■□□□□ 0.54
SMARCE1-204ENST00000400122 IFIT5Q13325 482 aaKnown RBP18.4■□□□□ 0.54
SMARCE1-204ENST00000400122 FAM161AQ3B820 660 aa18.4■□□□□ 0.54
SMARCE1-204ENST00000400122 DACT2Q5SW24 774 aa18.4■□□□□ 0.54
SMARCE1-204ENST00000400122 SULF1Q8IWU6 871 aa18.4■□□□□ 0.54
SMARCE1-204ENST00000400122 UTYO14607 1347 aa18.4■□□□□ 0.54
SMARCE1-204ENST00000400122 CYP4F22Q6NT55 531 aa18.39■□□□□ 0.53
SMARCE1-204ENST00000400122 USP48Q86UV5 1035 aa18.39■□□□□ 0.53
SMARCE1-204ENST00000400122 BEGAINQ9BUH8 593 aa18.39■□□□□ 0.53
SMARCE1-204ENST00000400122 MYOZ2Q9NPC6 264 aa18.39■□□□□ 0.53
SMARCE1-204ENST00000400122 SALL2Q9Y467 1007 aaPredicted RBP18.39■□□□□ 0.53
SMARCE1-204ENST00000400122 A0A1B0GUL6 1792 aa18.39■□□□□ 0.53
SMARCE1-204ENST00000400122 HSPA8P11142 646 aaKnown RBP18.38■□□□□ 0.53
SMARCE1-204ENST00000400122 OGFOD1Q8N543 542 aa18.38■□□□□ 0.53
SMARCE1-204ENST00000400122 C2orf69Q8N8R5 385 aa18.38■□□□□ 0.53
SMARCE1-204ENST00000400122 SRCIN1Q9C0H9 1055 aa18.38■□□□□ 0.53
SMARCE1-204ENST00000400122 PTPRCP08575 1304 aa18.38■□□□□ 0.53
SMARCE1-204ENST00000400122 IRS2Q9Y4H2 1338 aa18.38■□□□□ 0.53
SMARCE1-204ENST00000400122 FKBP1AP62942 108 aaKnown RBP18.37■□□□□ 0.53
SMARCE1-204ENST00000400122 CHRNDQ07001 517 aa18.37■□□□□ 0.53
SMARCE1-204ENST00000400122 CCDC102AQ96A19 550 aa18.37■□□□□ 0.53
SMARCE1-204ENST00000400122 GBA2Q9HCG7 927 aaPredicted RBP18.37■□□□□ 0.53
SMARCE1-204ENST00000400122 GGA3Q9NZ52 723 aa18.37■□□□□ 0.53
SMARCE1-204ENST00000400122 F6X3S4 739 aa18.36■□□□□ 0.53
SMARCE1-204ENST00000400122 CT47B1P0C2W7 299 aaPredicted RBP18.36■□□□□ 0.53
SMARCE1-204ENST00000400122 SCARF1Q14162 830 aa18.36■□□□□ 0.53
SMARCE1-204ENST00000400122 CCDC57Q2TAC2 916 aa18.36■□□□□ 0.53
SMARCE1-204ENST00000400122 REM2Q8IYK8 340 aaPredicted RBP18.36■□□□□ 0.53
SMARCE1-204ENST00000400122 HUNKP57058 714 aa18.35■□□□□ 0.53
SMARCE1-204ENST00000400122 TTLL5Q6EMB2 1281 aa18.35■□□□□ 0.53
SMARCE1-204ENST00000400122 C9orf78Q9NZ63 289 aaPredicted RBP18.35■□□□□ 0.53
SMARCE1-204ENST00000400122 PAPPA2Q9BXP8 1791 aa18.35■□□□□ 0.53
SMARCE1-204ENST00000400122 WTIPA6NIX2 430 aaPredicted RBP18.34■□□□□ 0.53
SMARCE1-204ENST00000400122 IL1R1P14778 569 aa18.34■□□□□ 0.53
SMARCE1-204ENST00000400122 LBX1P52954 281 aa18.34■□□□□ 0.53
SMARCE1-204ENST00000400122 ALDH1L2Q3SY69 923 aa18.34■□□□□ 0.53
SMARCE1-204ENST00000400122 RBM26Q5T8P6 1007 aaKnown RBP18.34■□□□□ 0.53
SMARCE1-204ENST00000400122 RGMBQ6NW40 437 aa18.34■□□□□ 0.53
SMARCE1-204ENST00000400122 LMBR1LQ6UX01 489 aa18.34■□□□□ 0.53
SMARCE1-204ENST00000400122 PAXIP1Q6ZW49 1069 aaPredicted RBP18.34■□□□□ 0.53
SMARCE1-204ENST00000400122 TXNRD3Q86VQ6 643 aa18.34■□□□□ 0.53
SMARCE1-204ENST00000400122 MTMR14Q8NCE2 650 aa18.34■□□□□ 0.53
SMARCE1-204ENST00000400122 CCER2I3L3R5 266 aa18.33■□□□□ 0.52
SMARCE1-204ENST00000400122 SLFN5Q08AF3 891 aa18.33■□□□□ 0.52
SMARCE1-204ENST00000400122 RABL6Q3YEC7 729 aaPredicted RBP18.33■□□□□ 0.52
SMARCE1-204ENST00000400122 TRMT2AQ8IZ69 625 aaKnown RBP18.33■□□□□ 0.52
SMARCE1-204ENST00000400122 CD209Q9NNX6 404 aa18.33■□□□□ 0.52
SMARCE1-204ENST00000400122 HDAC9Q9UKV0 1011 aa18.33■□□□□ 0.52
SMARCE1-204ENST00000400122 COL1A1P02452 1464 aaPredicted RBP18.33■□□□□ 0.52
SMARCE1-204ENST00000400122 FAM155AB1AL88 458 aaPredicted RBP18.32■□□□□ 0.52
SMARCE1-204ENST00000400122 WNT10BO00744 389 aa18.32■□□□□ 0.52
SMARCE1-204ENST00000400122 KCNJ4P48050 445 aa18.32■□□□□ 0.52
SMARCE1-204ENST00000400122 ANGEL2Q5VTE6 544 aaKnown RBP18.32■□□□□ 0.52
SMARCE1-204ENST00000400122 MRPL50Q8N5N7 158 aaKnown RBP18.32■□□□□ 0.52
SMARCE1-204ENST00000400122 CDCA5Q96FF9 252 aa18.32■□□□□ 0.52
SMARCE1-204ENST00000400122 ZBED3Q96IU2 234 aaPredicted RBP18.32■□□□□ 0.52
SMARCE1-204ENST00000400122 ZNF408Q9H9D4 720 aa18.32■□□□□ 0.52
SMARCE1-204ENST00000400122 SAGE1Q9NXZ1 904 aa18.32■□□□□ 0.52
SMARCE1-204ENST00000400122 ECM29Q5VYK3 1845 aa18.32■□□□□ 0.52
SMARCE1-204ENST00000400122 AKAP11Q9UKA4 1901 aa18.31■□□□□ 0.52
SMARCE1-204ENST00000400122 ADM5C9JUS6 153 aa18.31■□□□□ 0.52
SMARCE1-204ENST00000400122 UBE4AQ14139 1066 aa18.31■□□□□ 0.52
SMARCE1-204ENST00000400122 EPHA10Q5JZY3 1008 aa18.31■□□□□ 0.52
SMARCE1-204ENST00000400122 LDHAL6AQ6ZMR3 332 aa18.31■□□□□ 0.52
SMARCE1-204ENST00000400122 ZNF804AQ7Z570 1209 aa18.31■□□□□ 0.52
SMARCE1-204ENST00000400122 APOBEC3FQ8IUX4 373 aaKnown RBP18.3■□□□□ 0.52
SMARCE1-204ENST00000400122 KAZALD1Q96I82 304 aa18.3■□□□□ 0.52
SMARCE1-204ENST00000400122 AOC2O75106 756 aa18.29■□□□□ 0.52
SMARCE1-204ENST00000400122 SLC10A3P09131 477 aa18.29■□□□□ 0.52
SMARCE1-204ENST00000400122 ASTN2O75129 1339 aaPredicted RBP18.28■□□□□ 0.52
SMARCE1-204ENST00000400122 FAM205AQ6ZU69 1335 aa18.28■□□□□ 0.52
SMARCE1-204ENST00000400122 MROH5Q6ZUA9 1318 aa18.28■□□□□ 0.52
SMARCE1-204ENST00000400122 UNCXA6NJT0 531 aa18.28■□□□□ 0.52
SMARCE1-204ENST00000400122 SASH1O94885 1247 aa18.28■□□□□ 0.52
SMARCE1-204ENST00000400122 KLRK1P26718 216 aa18.28■□□□□ 0.52
SMARCE1-204ENST00000400122 GTF2IP78347 998 aa18.28■□□□□ 0.52
SMARCE1-204ENST00000400122 NBPF9Q3BBW0 867 aa18.28■□□□□ 0.52
SMARCE1-204ENST00000400122 TAF7LQ5H9L4 462 aa18.28■□□□□ 0.52
SMARCE1-204ENST00000400122 SLC4A10Q6U841 1118 aa18.28■□□□□ 0.52
SMARCE1-204ENST00000400122 RIPOR2Q9Y4F9 1068 aa18.28■□□□□ 0.52
SMARCE1-204ENST00000400122 PPP2R3BQ9Y5P8 575 aa18.28■□□□□ 0.52
SMARCE1-204ENST00000400122 KIF16BQ96L93 1317 aa18.27■□□□□ 0.52
SMARCE1-204ENST00000400122 NBPF7P0C2Y1 421 aaPredicted RBP18.27■□□□□ 0.52
SMARCE1-204ENST00000400122 ZNF157P51786 506 aaPredicted RBP18.27■□□□□ 0.52
SMARCE1-204ENST00000400122 SSH1Q8WYL5 1049 aa18.27■□□□□ 0.52
SMARCE1-204ENST00000400122 CNNM1Q9NRU3 951 aa18.27■□□□□ 0.52
SMARCE1-204ENST00000400122 CHMP3Q9Y3E7 222 aa18.27■□□□□ 0.52
SMARCE1-204ENST00000400122 TAF5LO75529 589 aa18.26■□□□□ 0.51
SMARCE1-204ENST00000400122 NF2P35240 595 aa18.26■□□□□ 0.51
SMARCE1-204ENST00000400122 SUCLG2Q96I99 432 aa18.26■□□□□ 0.51
SMARCE1-204ENST00000400122 CASP8AP2Q9UKL3 1982 aa18.26■□□□□ 0.51
SMARCE1-204ENST00000400122 GRM1Q13255 1194 aa18.25■□□□□ 0.51
SMARCE1-204ENST00000400122 DLK2Q6UY11 383 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms