RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 ZNF646O15015 1829 aaPredicted RBP23.46■■□□□ 1.35
UFD1-202ENST00000399523 PDE8AO60658 829 aa23.46■■□□□ 1.35
UFD1-202ENST00000399523 PCCAP05165 728 aaPredicted RBP23.46■■□□□ 1.35
UFD1-202ENST00000399523 FXR1P51114 621 aaKnown RBP eCLIP23.46■■□□□ 1.35
UFD1-202ENST00000399523 INHBEP58166 350 aa23.46■■□□□ 1.35
UFD1-202ENST00000399523 ANKRD18AQ8IVF6 992 aa23.46■■□□□ 1.35
UFD1-202ENST00000399523 MED23Q9ULK4 1368 aa23.45■■□□□ 1.34
UFD1-202ENST00000399523 MYO3BQ8WXR4 1341 aa23.45■■□□□ 1.34
UFD1-202ENST00000399523 WTIPA6NIX2 430 aaPredicted RBP23.45■■□□□ 1.34
UFD1-202ENST00000399523 MXD3Q9BW11 206 aa23.45■■□□□ 1.34
UFD1-202ENST00000399523 MANSC4A6NHS7 340 aaPredicted RBP23.44■■□□□ 1.34
UFD1-202ENST00000399523 STRIP1Q5VSL9 837 aa23.44■■□□□ 1.34
UFD1-202ENST00000399523 RIC3Q7Z5B4 369 aa23.44■■□□□ 1.34
UFD1-202ENST00000399523 IFNL1Q8IU54 200 aa23.44■■□□□ 1.34
UFD1-202ENST00000399523 CCDC191Q8NCU4 936 aa23.44■■□□□ 1.34
UFD1-202ENST00000399523 LAS1LQ9Y4W2 734 aaKnown RBP23.44■■□□□ 1.34
UFD1-202ENST00000399523 PRKG1Q13976 671 aa23.43■■□□□ 1.34
UFD1-202ENST00000399523 APOBEC3FQ8IUX4 373 aaKnown RBP23.43■■□□□ 1.34
UFD1-202ENST00000399523 CCDC85AQ96PX6 553 aaPredicted RBP23.43■■□□□ 1.34
UFD1-202ENST00000399523 TRIM35Q9UPQ4 493 aa23.43■■□□□ 1.34
UFD1-202ENST00000399523 SASH1O94885 1247 aa23.42■■□□□ 1.34
UFD1-202ENST00000399523 GOLGA2Q08379 1002 aa23.42■■□□□ 1.34
UFD1-202ENST00000399523 DUSP27Q5VZP5 1158 aa23.42■■□□□ 1.34
UFD1-202ENST00000399523 ZBED3Q96IU2 234 aaPredicted RBP23.42■■□□□ 1.34
UFD1-202ENST00000399523 ANGEL1Q9UNK9 670 aaKnown RBP23.42■■□□□ 1.34
UFD1-202ENST00000399523 PTPN22Q9Y2R2 807 aa23.42■■□□□ 1.34
UFD1-202ENST00000399523 TRIOBPQ9H2D6 2365 aa23.41■■□□□ 1.34
UFD1-202ENST00000399523 NEUROD2Q15784 382 aa23.41■■□□□ 1.34
UFD1-202ENST00000399523 ARMC5Q96C12 935 aa23.41■■□□□ 1.34
UFD1-202ENST00000399523 LAMB1P07942 1786 aa23.41■■□□□ 1.34
UFD1-202ENST00000399523 ZBTB48P10074 688 aaPredicted RBP23.4■■□□□ 1.34
UFD1-202ENST00000399523 MAP3K11Q16584 847 aa23.4■■□□□ 1.34
UFD1-202ENST00000399523 JARID2Q92833 1246 aaPredicted RBP23.4■■□□□ 1.34
UFD1-202ENST00000399523 SLC10A4Q96EP9 437 aa23.4■■□□□ 1.34
UFD1-202ENST00000399523 CDC5LQ99459 802 aaKnown RBP23.4■■□□□ 1.34
UFD1-202ENST00000399523 MYD88Q99836 296 aa23.4■■□□□ 1.34
UFD1-202ENST00000399523 COA1Q9GZY4 146 aa23.4■■□□□ 1.34
UFD1-202ENST00000399523 BSDC1Q9NW68 430 aaPredicted RBP23.4■■□□□ 1.34
UFD1-202ENST00000399523 MINPP1Q9UNW1 487 aa23.4■■□□□ 1.34
UFD1-202ENST00000399523 IGF2BP3O00425 579 aaKnown RBP eCLIP23.39■■□□□ 1.33
UFD1-202ENST00000399523 ERO1AQ96HE7 468 aa23.39■■□□□ 1.33
UFD1-202ENST00000399523 CWC25Q9NXE8 425 aaPredicted RBP23.39■■□□□ 1.33
UFD1-202ENST00000399523 EN2P19622 333 aaPredicted RBP23.38■■□□□ 1.33
UFD1-202ENST00000399523 CCT4P50991 539 aaKnown RBP23.38■■□□□ 1.33
UFD1-202ENST00000399523 PHAXQ9H814 394 aaKnown RBP23.38■■□□□ 1.33
UFD1-202ENST00000399523 COL1A1P02452 1464 aaPredicted RBP23.37■■□□□ 1.33
UFD1-202ENST00000399523 TXNRD3Q86VQ6 643 aa23.37■■□□□ 1.33
UFD1-202ENST00000399523 FBXW7Q969H0 707 aa23.37■■□□□ 1.33
UFD1-202ENST00000399523 WNK4Q96J92 1243 aa23.37■■□□□ 1.33
UFD1-202ENST00000399523 FZD1Q9UP38 647 aa23.37■■□□□ 1.33
UFD1-202ENST00000399523 UNCXA6NJT0 531 aa23.36■■□□□ 1.33
UFD1-202ENST00000399523 CTSWP56202 376 aa23.36■■□□□ 1.33
UFD1-202ENST00000399523 TTLL5Q6EMB2 1281 aa23.36■■□□□ 1.33
UFD1-202ENST00000399523 CLMNQ96JQ2 1002 aa23.36■■□□□ 1.33
UFD1-202ENST00000399523 DEFB129Q9H1M3 183 aa23.36■■□□□ 1.33
UFD1-202ENST00000399523 KIAA0825Q8IV33 1275 aa23.35■■□□□ 1.33
UFD1-202ENST00000399523 CCDC146Q8IYE0 955 aa23.35■■□□□ 1.33
UFD1-202ENST00000399523 TTLL11Q8NHH1 800 aa23.35■■□□□ 1.33
UFD1-202ENST00000399523 CD99L2Q8TCZ2 262 aa23.35■■□□□ 1.33
UFD1-202ENST00000399523 METTL22Q9BUU2 404 aaPredicted RBP23.35■■□□□ 1.33
UFD1-202ENST00000399523 SZT2Q5T011 3432 aa23.35■■□□□ 1.33
UFD1-202ENST00000399523 CRHR2Q13324 411 aa23.34■■□□□ 1.33
UFD1-202ENST00000399523 EFCC1Q9HA90 598 aa23.34■■□□□ 1.33
UFD1-202ENST00000399523 LEMD3Q9Y2U8 911 aa23.34■■□□□ 1.33
UFD1-202ENST00000399523 SSC5DA1L4H1 1573 aa23.33■■□□□ 1.33
UFD1-202ENST00000399523 PPP1R12BO60237 982 aaPredicted RBP23.33■■□□□ 1.33
UFD1-202ENST00000399523 OTUD7BQ6GQQ9 843 aa23.33■■□□□ 1.33
UFD1-202ENST00000399523 MBIPQ9NS73 344 aa23.33■■□□□ 1.33
UFD1-202ENST00000399523 COLQQ9Y215 455 aaPredicted RBP23.33■■□□□ 1.33
UFD1-202ENST00000399523 PPP2R3BQ9Y5P8 575 aa23.33■■□□□ 1.33
UFD1-202ENST00000399523 MYH3P11055 1940 aa23.33■■□□□ 1.32
UFD1-202ENST00000399523 SPEF2Q9C093 1822 aa23.32■■□□□ 1.32
UFD1-202ENST00000399523 GREM2Q9H772 168 aa23.32■■□□□ 1.32
UFD1-202ENST00000399523 CAP1Q01518 475 aa23.31■■□□□ 1.32
UFD1-202ENST00000399523 SP3Q02447 781 aa23.31■■□□□ 1.32
UFD1-202ENST00000399523 MTMR14Q8NCE2 650 aa23.31■■□□□ 1.32
UFD1-202ENST00000399523 RUNDC1Q96C34 613 aa23.31■■□□□ 1.32
UFD1-202ENST00000399523 ZNF333Q96JL9 665 aa23.31■■□□□ 1.32
UFD1-202ENST00000399523 TMEM106CQ9BVX2 250 aa23.31■■□□□ 1.32
UFD1-202ENST00000399523 TESPA1A2RU30 521 aaPredicted RBP23.3■■□□□ 1.32
UFD1-202ENST00000399523 GTF2IP78347 998 aa23.3■■□□□ 1.32
UFD1-202ENST00000399523 DLGAP5Q15398 846 aa23.3■■□□□ 1.32
UFD1-202ENST00000399523 PTPN18Q99952 460 aa23.3■■□□□ 1.32
UFD1-202ENST00000399523 ZNF853P0CG23 659 aa23.29■■□□□ 1.32
UFD1-202ENST00000399523 GJA5P36382 358 aa23.29■■□□□ 1.32
UFD1-202ENST00000399523 SUPT20HL1Q3ZLR7 823 aa23.29■■□□□ 1.32
UFD1-202ENST00000399523 ZNF804BA4D1E1 1349 aa23.29■■□□□ 1.32
UFD1-202ENST00000399523 ECM29Q5VYK3 1845 aa23.29■■□□□ 1.32
UFD1-202ENST00000399523 DDX58O95786 925 aaKnown RBP23.28■■□□□ 1.32
UFD1-202ENST00000399523 KLRK1P26718 216 aa23.28■■□□□ 1.32
UFD1-202ENST00000399523 RALBP1Q15311 655 aa23.28■■□□□ 1.32
UFD1-202ENST00000399523 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.28■■□□□ 1.32
UFD1-202ENST00000399523 RANBP2P49792 3224 aaKnown RBP23.27■■□□□ 1.32
UFD1-202ENST00000399523 IGKV5-2P06315 115 aa23.27■■□□□ 1.32
UFD1-202ENST00000399523 ANKRD2Q9GZV1 360 aa23.27■■□□□ 1.32
UFD1-202ENST00000399523 USP2O75604 605 aaPredicted RBP23.26■■□□□ 1.31
UFD1-202ENST00000399523 IREB2P48200 963 aaKnown RBP23.26■■□□□ 1.31
UFD1-202ENST00000399523 CERS5Q8N5B7 392 aa23.26■■□□□ 1.31
UFD1-202ENST00000399523 MAP3K2Q9Y2U5 619 aa23.26■■□□□ 1.31
UFD1-202ENST00000399523 ELL2O00472 640 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms