RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 EPB41L2O43491 1005 aaKnown RBP18.2■□□□□ 0.5
COL25A1-201ENST00000399126 RBM6P78332 1123 aaKnown RBP18.2■□□□□ 0.5
COL25A1-201ENST00000399126 NBPF5PQ86XG9 351 aaPredicted RBP18.2■□□□□ 0.5
COL25A1-201ENST00000399126 IL17RAQ96F46 866 aa18.2■□□□□ 0.5
COL25A1-201ENST00000399126 WTIPA6NIX2 430 aaPredicted RBP18.2■□□□□ 0.5
COL25A1-201ENST00000399126 MCAMP43121 646 aa18.2■□□□□ 0.5
COL25A1-201ENST00000399126 ZAP70P43403 619 aa18.2■□□□□ 0.5
COL25A1-201ENST00000399126 ADCK5Q3MIX3 580 aa18.2■□□□□ 0.5
COL25A1-201ENST00000399126 MAP4K1Q92918 833 aa18.2■□□□□ 0.5
COL25A1-201ENST00000399126 PHKA1P46020 1223 aa18.19■□□□□ 0.5
COL25A1-201ENST00000399126 PROM2Q8N271 834 aa18.19■□□□□ 0.5
COL25A1-201ENST00000399126 MROH5Q6ZUA9 1318 aa18.19■□□□□ 0.5
COL25A1-201ENST00000399126 FGFR2P21802 821 aa18.19■□□□□ 0.5
COL25A1-201ENST00000399126 HSP90AA2PQ14568 343 aaPredicted RBP18.19■□□□□ 0.5
COL25A1-201ENST00000399126 NECTIN1Q15223 517 aa18.19■□□□□ 0.5
COL25A1-201ENST00000399126 RTL9Q8NET4 1388 aa18.19■□□□□ 0.5
COL25A1-201ENST00000399126 PUM3Q15397 648 aaKnown RBP18.18■□□□□ 0.5
COL25A1-201ENST00000399126 ZNF772Q68DY9 489 aaPredicted RBP18.18■□□□□ 0.5
COL25A1-201ENST00000399126 NAP1L2Q9ULW6 460 aaPredicted RBP18.18■□□□□ 0.5
COL25A1-201ENST00000399126 IGHMBP2P38935 993 aaKnown RBP18.18■□□□□ 0.5
COL25A1-201ENST00000399126 KCNJ4P48050 445 aa18.18■□□□□ 0.5
COL25A1-201ENST00000399126 CREB3L3Q68CJ9 461 aa18.17■□□□□ 0.5
COL25A1-201ENST00000399126 CCDC102BQ68D86 513 aa18.17■□□□□ 0.5
COL25A1-201ENST00000399126 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.17■□□□□ 0.5
COL25A1-201ENST00000399126 CELF1Q92879 486 aaKnown RBP18.17■□□□□ 0.5
COL25A1-201ENST00000399126 LARP6Q9BRS8 491 aaKnown RBP18.17■□□□□ 0.5
COL25A1-201ENST00000399126 RFX7Q2KHR2 1363 aa18.17■□□□□ 0.5
COL25A1-201ENST00000399126 SF3B3Q15393 1217 aaKnown RBP18.17■□□□□ 0.5
COL25A1-201ENST00000399126 CHMP5Q9NZZ3 219 aa18.17■□□□□ 0.5
COL25A1-201ENST00000399126 CHRNDQ07001 517 aa18.16■□□□□ 0.5
COL25A1-201ENST00000399126 NFIXQ14938 502 aa18.16■□□□□ 0.5
COL25A1-201ENST00000399126 MCMDC2Q4G0Z9 681 aa18.16■□□□□ 0.5
COL25A1-201ENST00000399126 ZGPATQ8N5A5 531 aaKnown RBP18.16■□□□□ 0.5
COL25A1-201ENST00000399126 ARAP2Q8WZ64 1704 aa18.16■□□□□ 0.5
COL25A1-201ENST00000399126 TNRC6CQ9HCJ0 1690 aaKnown RBP18.16■□□□□ 0.5
COL25A1-201ENST00000399126 VPS53Q5VIR6 699 aa18.16■□□□□ 0.5
COL25A1-201ENST00000399126 SLC51AQ86UW1 340 aa18.16■□□□□ 0.5
COL25A1-201ENST00000399126 LPIN2Q92539 896 aa18.16■□□□□ 0.5
COL25A1-201ENST00000399126 SLC27A2O14975 620 aa18.16■□□□□ 0.5
COL25A1-201ENST00000399126 RGL2O15211 777 aa18.16■□□□□ 0.5
COL25A1-201ENST00000399126 CASTP20810 708 aaKnown RBP18.16■□□□□ 0.5
COL25A1-201ENST00000399126 TXNRD1Q16881 649 aa18.16■□□□□ 0.5
COL25A1-201ENST00000399126 SLC10A5Q5PT55 438 aa18.16■□□□□ 0.5
COL25A1-201ENST00000399126 TMX3Q96JJ7 454 aa18.16■□□□□ 0.5
COL25A1-201ENST00000399126 GSE1Q14687 1217 aa18.15■□□□□ 0.5
COL25A1-201ENST00000399126 JAKMIP1Q96N16 626 aaKnown RBP18.15■□□□□ 0.5
COL25A1-201ENST00000399126 NYXQ9GZU5 481 aa18.15■□□□□ 0.5
COL25A1-201ENST00000399126 A0A1B0GUL6 1792 aa18.15■□□□□ 0.5
COL25A1-201ENST00000399126 MYH7P12883 1935 aa18.15■□□□□ 0.5
COL25A1-201ENST00000399126 ZMYM1Q5SVZ6 1142 aa18.15■□□□□ 0.5
COL25A1-201ENST00000399126 CDC5LQ99459 802 aaKnown RBP18.15■□□□□ 0.5
COL25A1-201ENST00000399126 MAST3O60307 1309 aa18.14■□□□□ 0.5
COL25A1-201ENST00000399126 M0R2C6 588 aa18.14■□□□□ 0.49
COL25A1-201ENST00000399126 RNF113AO15541 343 aaKnown RBP18.14■□□□□ 0.49
COL25A1-201ENST00000399126 CYP2E1P05181 493 aaPredicted RBP18.14■□□□□ 0.49
COL25A1-201ENST00000399126 TPTE2Q6XPS3 522 aa18.14■□□□□ 0.49
COL25A1-201ENST00000399126 TICAM2Q86XR7 235 aa18.14■□□□□ 0.49
COL25A1-201ENST00000399126 ANKRD18AQ8IVF6 992 aa18.14■□□□□ 0.49
COL25A1-201ENST00000399126 CNPY4Q8N129 248 aa18.14■□□□□ 0.49
COL25A1-201ENST00000399126 KCNB2Q92953 911 aa18.14■□□□□ 0.49
COL25A1-201ENST00000399126 OSBP2Q969R2 916 aa18.14■□□□□ 0.49
COL25A1-201ENST00000399126 SLC27A3Q5K4L6 730 aa18.14■□□□□ 0.49
COL25A1-201ENST00000399126 TTC14Q96N46 770 aa18.14■□□□□ 0.49
COL25A1-201ENST00000399126 BCAMP50895 628 aa18.13■□□□□ 0.49
COL25A1-201ENST00000399126 PIH1D3Q9NQM4 214 aaKnown RBP18.13■□□□□ 0.49
COL25A1-201ENST00000399126 A0A0G2JLW4 131 aa18.13■□□□□ 0.49
COL25A1-201ENST00000399126 NPHP1O15259 732 aa18.13■□□□□ 0.49
COL25A1-201ENST00000399126 GYS1P13807 737 aa18.13■□□□□ 0.49
COL25A1-201ENST00000399126 SLC5A1P13866 664 aa18.13■□□□□ 0.49
COL25A1-201ENST00000399126 NLRP3Q96P20 1036 aa18.13■□□□□ 0.49
COL25A1-201ENST00000399126 ARID4AP29374 1257 aaPredicted RBP18.12■□□□□ 0.49
COL25A1-201ENST00000399126 RGS17Q9UGC6 210 aaPredicted RBP18.12■□□□□ 0.49
COL25A1-201ENST00000399126 AK2P54819 239 aa18.12■□□□□ 0.49
COL25A1-201ENST00000399126 RASGRF1Q13972 1273 aa18.12■□□□□ 0.49
COL25A1-201ENST00000399126 TCEANC2Q96MN5 208 aa18.12■□□□□ 0.49
COL25A1-201ENST00000399126 HMG20BQ9P0W2 317 aa18.12■□□□□ 0.49
COL25A1-201ENST00000399126 PKP1Q13835 747 aa18.11■□□□□ 0.49
COL25A1-201ENST00000399126 HELLSQ9NRZ9 838 aa18.11■□□□□ 0.49
COL25A1-201ENST00000399126 IQSEC3Q9UPP2 1182 aaPredicted RBP18.11■□□□□ 0.49
COL25A1-201ENST00000399126 CARMIL3Q8ND23 1372 aa18.11■□□□□ 0.49
COL25A1-201ENST00000399126 ZKSCAN1P17029 563 aaPredicted RBP18.11■□□□□ 0.49
COL25A1-201ENST00000399126 SSFA2P28290 1259 aa18.11■□□□□ 0.49
COL25A1-201ENST00000399126 RXRBP28702 533 aa18.11■□□□□ 0.49
COL25A1-201ENST00000399126 ZNF827Q17R98 1081 aa18.11■□□□□ 0.49
COL25A1-201ENST00000399126 WASHC4Q2M389 1173 aa18.11■□□□□ 0.49
COL25A1-201ENST00000399126 ZNF512BQ96KM6 892 aaPredicted RBP18.11■□□□□ 0.49
COL25A1-201ENST00000399126 ARID3AQ99856 593 aa18.11■□□□□ 0.49
COL25A1-201ENST00000399126 PUS7LQ9H0K6 701 aaKnown RBP18.11■□□□□ 0.49
COL25A1-201ENST00000399126 MINPP1Q9UNW1 487 aa18.11■□□□□ 0.49
COL25A1-201ENST00000399126 APBA3O96018 575 aa18.1■□□□□ 0.49
COL25A1-201ENST00000399126 ADRA2BP18089 450 aa18.1■□□□□ 0.49
COL25A1-201ENST00000399126 BSDC1Q9NW68 430 aaPredicted RBP18.1■□□□□ 0.49
COL25A1-201ENST00000399126 RPAP1Q9BWH6 1393 aaPredicted RBP18.1■□□□□ 0.49
COL25A1-201ENST00000399126 DTNBO60941 627 aa18.1■□□□□ 0.49
COL25A1-201ENST00000399126 TM4SF1P30408 202 aa18.1■□□□□ 0.49
COL25A1-201ENST00000399126 RUFY3Q7L099 469 aa18.1■□□□□ 0.49
COL25A1-201ENST00000399126 ZSWIM6Q9HCJ5 1215 aa18.1■□□□□ 0.49
COL25A1-201ENST00000399126 IDH1O75874 414 aaKnown RBP18.09■□□□□ 0.49
COL25A1-201ENST00000399126 CYP21A2P08686 494 aa18.09■□□□□ 0.49
COL25A1-201ENST00000399126 CNBD1Q8NA66 436 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms