RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 AAMPQ13685 434 aa12.97□□□□□ -0.33
CYCSP55-201ENST00000399027 TXNRD3Q86VQ6 643 aa12.97□□□□□ -0.33
CYCSP55-201ENST00000399027 ZNRF3Q9ULT6 936 aa12.97□□□□□ -0.33
CYCSP55-201ENST00000399027 ZNF541Q9H0D2 1346 aa12.96□□□□□ -0.33
CYCSP55-201ENST00000399027 YDJCA8MPS7 323 aa12.96□□□□□ -0.33
CYCSP55-201ENST00000399027 SNAP23O00161 211 aa12.96□□□□□ -0.33
CYCSP55-201ENST00000399027 ECE2O60344 883 aa12.96□□□□□ -0.33
CYCSP55-201ENST00000399027 KLRK1P26718 216 aa12.96□□□□□ -0.33
CYCSP55-201ENST00000399027 PUM3Q15397 648 aaKnown RBP12.96□□□□□ -0.33
CYCSP55-201ENST00000399027 COA1Q9GZY4 146 aa12.96□□□□□ -0.33
CYCSP55-201ENST00000399027 DBNDD1Q9H9R9 158 aa12.96□□□□□ -0.33
CYCSP55-201ENST00000399027 ZNF609O15014 1411 aa12.96□□□□□ -0.34
CYCSP55-201ENST00000399027 KDM2BQ8NHM5 1336 aa12.95□□□□□ -0.34
CYCSP55-201ENST00000399027 HMMRO75330 724 aa12.95□□□□□ -0.34
CYCSP55-201ENST00000399027 SASH1O94885 1247 aa12.95□□□□□ -0.34
CYCSP55-201ENST00000399027 EIF6P56537 245 aaKnown RBP12.95□□□□□ -0.34
CYCSP55-201ENST00000399027 DOK7Q18PE1 504 aa12.95□□□□□ -0.34
CYCSP55-201ENST00000399027 DPY19L2Q6NUT2 758 aa12.95□□□□□ -0.34
CYCSP55-201ENST00000399027 PODNQ7Z5L7 613 aa12.95□□□□□ -0.34
CYCSP55-201ENST00000399027 GPC2Q8N158 579 aa12.95□□□□□ -0.34
CYCSP55-201ENST00000399027 CEP126Q9P2H0 1117 aa12.95□□□□□ -0.34
CYCSP55-201ENST00000399027 SURF6O75683 361 aaKnown RBP12.94□□□□□ -0.34
CYCSP55-201ENST00000399027 CXCL9Q07325 125 aa12.94□□□□□ -0.34
CYCSP55-201ENST00000399027 G3BP1Q13283 466 aaKnown RBP eCLIP12.94□□□□□ -0.34
CYCSP55-201ENST00000399027 LPIN2Q92539 896 aa12.94□□□□□ -0.34
CYCSP55-201ENST00000399027 L3MBTL3Q96JM7 780 aaPredicted RBP12.94□□□□□ -0.34
CYCSP55-201ENST00000399027 ADAMTSL1Q8N6G6 1762 aa12.94□□□□□ -0.34
CYCSP55-201ENST00000399027 DDNO94850 711 aaPredicted RBP12.93□□□□□ -0.34
CYCSP55-201ENST00000399027 IL1R1P14778 569 aa12.93□□□□□ -0.34
CYCSP55-201ENST00000399027 TFCP2Q12800 502 aa12.93□□□□□ -0.34
CYCSP55-201ENST00000399027 CIAPIN1Q6FI81 312 aa12.93□□□□□ -0.34
CYCSP55-201ENST00000399027 ZNF804AQ7Z570 1209 aa12.93□□□□□ -0.34
CYCSP55-201ENST00000399027 ZNF784Q8NCA9 323 aaPredicted RBP12.93□□□□□ -0.34
CYCSP55-201ENST00000399027 FAM84BQ96KN1 310 aaPredicted RBP12.93□□□□□ -0.34
CYCSP55-201ENST00000399027 CD209Q9NNX6 404 aa12.93□□□□□ -0.34
CYCSP55-201ENST00000399027 GPR108Q9NPR9 543 aa12.93□□□□□ -0.34
CYCSP55-201ENST00000399027 AKAP2Q9Y2D5 859 aa12.93□□□□□ -0.34
CYCSP55-201ENST00000399027 PCDHB15Q9Y5E8 787 aa12.93□□□□□ -0.34
CYCSP55-201ENST00000399027 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.93□□□□□ -0.34
CYCSP55-201ENST00000399027 ECM29Q5VYK3 1845 aa12.92□□□□□ -0.34
CYCSP55-201ENST00000399027 AKAP11Q9UKA4 1901 aa12.92□□□□□ -0.34
CYCSP55-201ENST00000399027 G3V3G9 751 aa12.92□□□□□ -0.34
CYCSP55-201ENST00000399027 IFIT1P09914 478 aaKnown RBP12.92□□□□□ -0.34
CYCSP55-201ENST00000399027 SLC5A1P13866 664 aa12.92□□□□□ -0.34
CYCSP55-201ENST00000399027 TNIP1Q15025 636 aa12.92□□□□□ -0.34
CYCSP55-201ENST00000399027 ATP2B3Q16720 1220 aa12.92□□□□□ -0.34
CYCSP55-201ENST00000399027 HSP90AB4PQ58FF6 505 aa12.92□□□□□ -0.34
CYCSP55-201ENST00000399027 DCAF8Q5TAQ9 597 aa12.92□□□□□ -0.34
CYCSP55-201ENST00000399027 FBXO33Q7Z6M2 555 aa12.92□□□□□ -0.34
CYCSP55-201ENST00000399027 EXOC6Q8TAG9 804 aa12.92□□□□□ -0.34
CYCSP55-201ENST00000399027 KCNQ5Q9NR82 932 aa12.92□□□□□ -0.34
CYCSP55-201ENST00000399027 A0A1B0GUL7 405 aa12.91□□□□□ -0.34
CYCSP55-201ENST00000399027 POTECB2RU33 542 aa12.91□□□□□ -0.34
CYCSP55-201ENST00000399027 RAD17O75943 681 aa12.91□□□□□ -0.34
CYCSP55-201ENST00000399027 VIL1P09327 827 aaKnown RBP12.91□□□□□ -0.34
CYCSP55-201ENST00000399027 HIBADHP31937 336 aaKnown RBP12.91□□□□□ -0.34
CYCSP55-201ENST00000399027 GYG1P46976 350 aa12.91□□□□□ -0.34
CYCSP55-201ENST00000399027 CAVIN4Q5BKX8 364 aa12.91□□□□□ -0.34
CYCSP55-201ENST00000399027 ERC1Q8IUD2 1116 aa12.91□□□□□ -0.34
CYCSP55-201ENST00000399027 TDRD7Q8NHU6 1098 aaKnown RBP12.91□□□□□ -0.34
CYCSP55-201ENST00000399027 EXOC6BQ9Y2D4 811 aa12.91□□□□□ -0.34
CYCSP55-201ENST00000399027 USP17L3A6NCW0 530 aa12.9□□□□□ -0.34
CYCSP55-201ENST00000399027 USP17L4A6NCW7 530 aa12.9□□□□□ -0.34
CYCSP55-201ENST00000399027 PSMD14O00487 310 aa12.9□□□□□ -0.34
CYCSP55-201ENST00000399027 RAB11FIP3O75154 756 aa12.9□□□□□ -0.34
CYCSP55-201ENST00000399027 OS9Q13438 667 aaPredicted RBP12.9□□□□□ -0.34
CYCSP55-201ENST00000399027 STRIP1Q5VSL9 837 aa12.9□□□□□ -0.34
CYCSP55-201ENST00000399027 USP17L1Q7RTZ2 530 aa12.9□□□□□ -0.34
CYCSP55-201ENST00000399027 DCTPP1Q9H773 170 aa12.9□□□□□ -0.34
CYCSP55-201ENST00000399027 GPBP1L1Q9HC44 474 aaPredicted RBP12.9□□□□□ -0.34
CYCSP55-201ENST00000399027 RPS12P25398 132 aaKnown RBP12.89□□□□□ -0.35
CYCSP55-201ENST00000399027 SCNN1DP51172 638 aa12.89□□□□□ -0.35
CYCSP55-201ENST00000399027 TIMM10P62072 90 aa12.89□□□□□ -0.35
CYCSP55-201ENST00000399027 TNNI3KQ59H18 835 aa12.89□□□□□ -0.35
CYCSP55-201ENST00000399027 DACT2Q5SW24 774 aa12.89□□□□□ -0.35
CYCSP55-201ENST00000399027 RHPN1Q8TCX5 695 aa12.89□□□□□ -0.35
CYCSP55-201ENST00000399027 ZNF526Q8TF50 670 aaPredicted RBP12.89□□□□□ -0.35
CYCSP55-201ENST00000399027 DPF2Q92785 391 aa12.89□□□□□ -0.35
CYCSP55-201ENST00000399027 KIF1BPQ96EK5 621 aa12.89□□□□□ -0.35
CYCSP55-201ENST00000399027 NMRK2Q9NPI5 230 aa12.89□□□□□ -0.35
CYCSP55-201ENST00000399027 GJA3Q9Y6H8 435 aa12.89□□□□□ -0.35
CYCSP55-201ENST00000399027 FPGT-TNNI3KV9GXZ4 949 aa12.89□□□□□ -0.35
CYCSP55-201ENST00000399027 FAM205AQ6ZU69 1335 aa12.88□□□□□ -0.35
CYCSP55-201ENST00000399027 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
CYCSP55-201ENST00000399027 DOCK2Q92608 1830 aa12.88□□□□□ -0.35
CYCSP55-201ENST00000399027 IQCA1LA6NCM1 817 aa12.88□□□□□ -0.35
CYCSP55-201ENST00000399027 CENPBP07199 599 aaPredicted RBP12.88□□□□□ -0.35
CYCSP55-201ENST00000399027 VEGFAP15692 232 aaPredicted RBP12.88□□□□□ -0.35
CYCSP55-201ENST00000399027 BCAMP50895 628 aa12.88□□□□□ -0.35
CYCSP55-201ENST00000399027 FKBP1AP62942 108 aaKnown RBP12.88□□□□□ -0.35
CYCSP55-201ENST00000399027 HDAC1Q13547 482 aaPredicted RBP12.88□□□□□ -0.35
CYCSP55-201ENST00000399027 TTLL5Q6EMB2 1281 aa12.88□□□□□ -0.35
CYCSP55-201ENST00000399027 RSBN1LQ6PCB5 846 aaPredicted RBP12.88□□□□□ -0.35
CYCSP55-201ENST00000399027 VPS37DQ86XT2 251 aa12.88□□□□□ -0.35
CYCSP55-201ENST00000399027 AGBL3Q8NEM8 1001 aa12.88□□□□□ -0.35
CYCSP55-201ENST00000399027 XAGE2Q96GT9 111 aa12.88□□□□□ -0.35
CYCSP55-201ENST00000399027 RRAGCQ9HB90 399 aa12.88□□□□□ -0.35
CYCSP55-201ENST00000399027 COL1A1P02452 1464 aaPredicted RBP12.88□□□□□ -0.35
CYCSP55-201ENST00000399027 MYO5AQ9Y4I1 1855 aaKnown RBP12.88□□□□□ -0.35
CYCSP55-201ENST00000399027 KIF3CO14782 793 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms